RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C TMA16Q08687 178 aa3.4□□□□□ -1.87
SHG1YBR258C ILS1P09436 1072 aaKnown RBP3.39□□□□□ -1.87
SHG1YBR258C PFK2P16862 959 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
SHG1YBR258C ERG8P24521 451 aa3.39□□□□□ -1.87
SHG1YBR258C RER1P25560 188 aa3.39□□□□□ -1.87
SHG1YBR258C MRP20P32387 263 aa3.39□□□□□ -1.87
SHG1YBR258C CNS1P33313 385 aa3.39□□□□□ -1.87
SHG1YBR258C NTR2P36118 322 aaPredicted RBP3.39□□□□□ -1.87
SHG1YBR258C ERG7P38604 731 aa3.39□□□□□ -1.87
SHG1YBR258C PSD1P39006 500 aa3.39□□□□□ -1.87
SHG1YBR258C AFG3P39925 761 aa3.39□□□□□ -1.87
SHG1YBR258C FMP10P40098 244 aa3.39□□□□□ -1.87
SHG1YBR258C SWP82P43554 623 aa3.39□□□□□ -1.87
SHG1YBR258C IRC7P43623 340 aa3.39□□□□□ -1.87
SHG1YBR258C SIP4P46954 829 aa3.39□□□□□ -1.87
SHG1YBR258C ORC5P50874 479 aa3.39□□□□□ -1.87
SHG1YBR258C MEP3P53390 489 aa3.39□□□□□ -1.87
SHG1YBR258C YPR003CP53394 754 aa3.39□□□□□ -1.87
SHG1YBR258C REG1Q00816 1014 aa3.39□□□□□ -1.87
SHG1YBR258C SNU56Q03782 492 aaKnown RBP3.39□□□□□ -1.87
SHG1YBR258C YKU80Q04437 629 aa3.39□□□□□ -1.87
SHG1YBR258C SWA2Q06677 668 aa3.39□□□□□ -1.87
SHG1YBR258C ERG27Q12452 347 aaKnown RBP3.39□□□□□ -1.87
SHG1YBR258C PRP8P33334 2413 aaKnown RBP3.38□□□□□ -1.87
SHG1YBR258C NUP1P20676 1076 aa3.38□□□□□ -1.87
SHG1YBR258C COQ3P27680 312 aa3.38□□□□□ -1.87
SHG1YBR258C MCM10P32354 571 aa3.38□□□□□ -1.87
SHG1YBR258C ECM32P32644 1121 aaKnown RBP3.38□□□□□ -1.87
SHG1YBR258C OCT1P35999 772 aa3.38□□□□□ -1.87
SHG1YBR258C ARN1P38731 627 aa3.38□□□□□ -1.87
SHG1YBR258C SEC31P38968 1273 aaKnown RBP3.38□□□□□ -1.87
SHG1YBR258C DPH1P40487 425 aaKnown RBP3.38□□□□□ -1.87
SHG1YBR258C YJL107CP42947 387 aa3.38□□□□□ -1.87
SHG1YBR258C ERG13P54839 491 aaKnown RBP3.38□□□□□ -1.87
SHG1YBR258C VTC3Q02725 835 aa3.38□□□□□ -1.87
SHG1YBR258C SNO4Q04902 237 aa3.38□□□□□ -1.87
SHG1YBR258C CRN1Q06440 651 aa3.38□□□□□ -1.87
SHG1YBR258C YDL121CQ07541 149 aa3.38□□□□□ -1.87
SHG1YBR258C GPN2Q08726 347 aaPredicted RBP3.38□□□□□ -1.87
SHG1YBR258C HSP33Q08914 237 aaKnown RBP3.38□□□□□ -1.87
SHG1YBR258C HSP32Q08992 237 aa3.38□□□□□ -1.87
SHG1YBR258C RRG1Q12167 365 aaPredicted RBP3.38□□□□□ -1.87
SHG1YBR258C YML133CQ03099 1374 aa3.38□□□□□ -1.87
SHG1YBR258C YLR302CO13544 120 aa3.37□□□□□ -1.87
SHG1YBR258C YPT1P01123 206 aaKnown RBP3.37□□□□□ -1.87
SHG1YBR258C FUM1P08417 488 aaKnown RBP3.37□□□□□ -1.87
SHG1YBR258C MRP2P10663 115 aaPredicted RBP3.37□□□□□ -1.87
SHG1YBR258C URE2P23202 354 aaKnown RBP3.37□□□□□ -1.87
SHG1YBR258C SWE1P32944 819 aa3.37□□□□□ -1.87
SHG1YBR258C TOM71P38825 639 aaKnown RBP3.37□□□□□ -1.87
SHG1YBR258C SLZ1P40167 298 aa3.37□□□□□ -1.87
SHG1YBR258C PFK26P40433 827 aaKnown RBP3.37□□□□□ -1.87
SHG1YBR258C CFD1P40558 293 aa3.37□□□□□ -1.87
SHG1YBR258C PSA1P41940 361 aaKnown RBP3.37□□□□□ -1.87
SHG1YBR258C ARC1P46672 376 aaKnown RBP3.37□□□□□ -1.87
SHG1YBR258C AAD10P47182 288 aa3.37□□□□□ -1.87
SHG1YBR258C YGL082WP53155 381 aa3.37□□□□□ -1.87
SHG1YBR258C PIL1P53252 339 aaKnown RBP3.37□□□□□ -1.87
SHG1YBR258C COP1P53622 1201 aaKnown RBP3.37□□□□□ -1.87
SHG1YBR258C INA17Q02888 182 aa3.37□□□□□ -1.87
SHG1YBR258C MUB1Q03162 620 aa3.37□□□□□ -1.87
SHG1YBR258C PIG1Q06216 648 aa3.37□□□□□ -1.87
SHG1YBR258C YOR389WQ08912 624 aa3.37□□□□□ -1.87
SHG1YBR258C NUS1Q12063 375 aa3.37□□□□□ -1.87
SHG1YBR258C NBP2Q12163 236 aa3.37□□□□□ -1.87
SHG1YBR258C UTP10P42945 1769 aaKnown RBP3.37□□□□□ -1.87
SHG1YBR258C FLO11P08640 1367 aa3.37□□□□□ -1.87
SHG1YBR258C RPL19AP0CX82 189 aaKnown RBP3.36□□□□□ -1.87
SHG1YBR258C RPL19BP0CX83 189 aaPredicted RBP3.36□□□□□ -1.87
SHG1YBR258C YNG2P38806 282 aaKnown RBP3.36□□□□□ -1.87
SHG1YBR258C VPS41P38959 992 aa3.36□□□□□ -1.87
SHG1YBR258C ECM10P39987 644 aa3.36□□□□□ -1.87
SHG1YBR258C VID27P40157 782 aa3.36□□□□□ -1.87
SHG1YBR258C CTK2P46962 323 aa3.36□□□□□ -1.87
SHG1YBR258C CBK1P53894 756 aa3.36□□□□□ -1.87
SHG1YBR258C INN1P53901 409 aa3.36□□□□□ -1.87
SHG1YBR258C YLR455WQ06188 304 aa3.36□□□□□ -1.87
SHG1YBR258C CRC1Q12289 327 aa3.36□□□□□ -1.87
SHG1YBR258C TUS1Q06412 1307 aa3.36□□□□□ -1.87
SHG1YBR258C GAL4P04386 881 aa3.35□□□□□ -1.87
SHG1YBR258C GPA1P08539 472 aa3.35□□□□□ -1.87
SHG1YBR258C YMR085WP0CF18 432 aa3.35□□□□□ -1.87
SHG1YBR258C YER190C-BP0CX94 160 aa3.35□□□□□ -1.87
SHG1YBR258C YEL077W-AP0CX95 160 aa3.35□□□□□ -1.87
SHG1YBR258C YGR296C-BP0CX96 160 aa3.35□□□□□ -1.87
SHG1YBR258C YPL283W-BP0CX97 160 aa3.35□□□□□ -1.87
SHG1YBR258C YPR204C-AP0CX98 160 aa3.35□□□□□ -1.87
SHG1YBR258C STE50P25344 346 aa3.35□□□□□ -1.87
SHG1YBR258C LHS1P36016 881 aa3.35□□□□□ -1.87
SHG1YBR258C ADE17P38009 592 aaKnown RBP3.35□□□□□ -1.87
SHG1YBR258C UBP13P38187 747 aa3.35□□□□□ -1.87
SHG1YBR258C MRX1P40050 688 aa3.35□□□□□ -1.87
SHG1YBR258C PKP1P40530 394 aa3.35□□□□□ -1.87
SHG1YBR258C YML122CQ03207 126 aa3.35□□□□□ -1.87
SHG1YBR258C RSM28Q03430 361 aa3.35□□□□□ -1.87
SHG1YBR258C YMR018WQ04364 514 aa3.35□□□□□ -1.87
SHG1YBR258C MCH4Q08268 501 aa3.35□□□□□ -1.87
SHG1YBR258C YOR019WQ99248 730 aa3.35□□□□□ -1.87
SHG1YBR258C SEM1O94742 89 aa3.34□□□□□ -1.87
SHG1YBR258C PET111P08468 800 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms