RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene ROX3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX3	YBL093C	PPG1	P32838	368 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	AIM18	P38884	321 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	CKB2	P38930	258 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	MSS4	P38994	779 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	DSS1	P39112	969 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	SCC4	P40090	624 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	MAF1	P41910	395 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	SSY5	P47002	699 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	TAH11	P47112	604 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	ZIP2	P53061	704 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	CEG1	Q01159	459 aa	Predicted RBP	5.45	□□□□□ -1.54
ROX3	YBL093C	INA17	Q02888	182 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	PNG1	Q02890	363 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	SND1	Q04007	877 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	ECM22	Q05958	814 aa	Predicted RBP	5.45	□□□□□ -1.54
ROX3	YBL093C	MRI1	Q06489	411 aa	Known RBP	5.45	□□□□□ -1.54
ROX3	YBL093C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	5.45	□□□□□ -1.54	not detected
ROX3	YBL093C	LEA1	Q08963	238 aa	Predicted RBP	5.45	□□□□□ -1.54
ROX3	YBL093C	YLL056C	Q12177	298 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.45	□□□□□ -1.54	not detected
ROX3	YBL093C	GPM3	Q12326	303 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	LAS17	Q12446	633 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	YBR182C-A	Q8TGU6	64 aa		5.45	□□□□□ -1.54
ROX3	YBL093C	ILS1	P09436	1072 aa	Known RBP	5.44	□□□□□ -1.54
ROX3	YBL093C	HRR25	P29295	494 aa	Known RBP	5.44	□□□□□ -1.54
ROX3	YBL093C	RAD5	P32849	1169 aa	Predicted RBP	5.44	□□□□□ -1.54
ROX3	YBL093C	MTC2	P34246	357 aa		5.44	□□□□□ -1.54
ROX3	YBL093C	SET3	P36124	751 aa		5.44	□□□□□ -1.54
ROX3	YBL093C	FSH1	P38777	243 aa	Known RBP	5.44	□□□□□ -1.54
ROX3	YBL093C	PRM9	P39551	298 aa		5.44	□□□□□ -1.54
ROX3	YBL093C	VHR1	P40522	640 aa		5.44	□□□□□ -1.54
ROX3	YBL093C	TRS85	P46944	698 aa		5.44	□□□□□ -1.54
ROX3	YBL093C	TY4A-J	P47023	414 aa		5.44	□□□□□ -1.54
ROX3	YBL093C	RNH70	P53331	553 aa		5.44	□□□□□ -1.54
ROX3	YBL093C	YPR003C	P53394	754 aa		5.44	□□□□□ -1.54
ROX3	YBL093C	YNL144C	P53907	740 aa		5.44	□□□□□ -1.54
ROX3	YBL093C	VPS9	P54787	451 aa		5.44	□□□□□ -1.54
ROX3	YBL093C	SLU7	Q02775	382 aa	Known RBP	5.44	□□□□□ -1.54
ROX3	YBL093C	UGO1	Q03327	502 aa		5.44	□□□□□ -1.54
ROX3	YBL093C	ARA2	Q04212	335 aa		5.44	□□□□□ -1.54
ROX3	YBL093C	SPG3	Q04398	127 aa	Predicted RBP	5.44	□□□□□ -1.54
ROX3	YBL093C	YDL073W	Q07454	984 aa		5.44	□□□□□ -1.54
ROX3	YBL093C	AAD4	Q07747	329 aa		5.44	□□□□□ -1.54
ROX3	YBL093C	NCA2	Q12374	616 aa		5.44	□□□□□ -1.54
ROX3	YBL093C	AI5_ALPHA	Q9ZZX1	630 aa		5.44	□□□□□ -1.54
ROX3	YBL093C	QCR6	P00127	147 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	TRP4	P07285	380 aa	Predicted RBP	5.43	□□□□□ -1.54
ROX3	YBL093C	SRV2	P17555	526 aa	Known RBP	5.43	□□□□□ -1.54
ROX3	YBL093C	MET16	P18408	261 aa	Predicted RBP	5.43	□□□□□ -1.54
ROX3	YBL093C	MRPL25	P23369	157 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	YIH1	P25637	258 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	PEX6	P33760	1030 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	YKR051W	P36142	418 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	YBR225W	P38321	900 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	BIT2	P38346	545 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	SMF2	P38778	549 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	PPE1	P38796	400 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	SPC97	P38863	823 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	STL1	P39932	569 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	JHD1	P40034	492 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	VPS25	P47142	202 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	MSE1	P48525	536 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	YGR127W	P53275	312 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	LSC1	P53598	329 aa	Known RBP	5.43	□□□□□ -1.54
ROX3	YBL093C	SLT2	Q00772	484 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	YMR160W	Q03823	816 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	EMI2	Q04409	500 aa	Known RBP	5.43	□□□□□ -1.54
ROX3	YBL093C	ADE13	Q05911	482 aa	Known RBP	5.43	□□□□□ -1.54
ROX3	YBL093C	NRT1	Q08485	598 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	ARP7	Q12406	477 aa		5.43	□□□□□ -1.54
ROX3	YBL093C	TEF1	P02994	458 aa	Known RBP	5.42	□□□□□ -1.54
ROX3	YBL093C	CDC9	P04819	755 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	HIP1	P06775	603 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	KGD2	P19262	463 aa	Predicted RBP	5.42	□□□□□ -1.54
ROX3	YBL093C	PGS1	P25578	521 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	CTF13	P35203	478 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	YBR032W	P38223	100 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	YBP1	P38315	674 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	OTU2	P38747	307 aa	Known RBP	5.42	□□□□□ -1.54
ROX3	YBL093C	RPP1	P38786	293 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	EDC3	P39998	551 aa	Known RBP	5.42	□□□□□ -1.54
ROX3	YBL093C	YAT2	P40017	923 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	ATM1	P40416	690 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	ERR3	P42222	437 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	SNG1	P46950	547 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	MNN11	P46985	422 aa	Known RBP	5.42	□□□□□ -1.54
ROX3	YBL093C	IML2	P47031	731 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	HXT16	P47185	567 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	MRX6	P48564	524 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	SUN4	P53616	420 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	ASI2	P53895	289 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	KTR5	P53966	522 aa	Predicted RBP	5.42	□□□□□ -1.54
ROX3	YBL093C	MTD1	Q02046	320 aa	Known RBP	5.42	□□□□□ -1.54
ROX3	YBL093C	HER2	Q03557	464 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	FAR8	Q05040	523 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	ARP9	Q05123	467 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	CRR1	Q05790	422 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	GRX8	Q05926	109 aa		5.42	□□□□□ -1.54
ROX3	YBL093C	CUE5	Q08412	411 aa	Known RBP	5.42	□□□□□ -1.54
ROX3	YBL093C	PUS9	Q12069	462 aa		5.42	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms