RNA–Protein interactions for RNA: YPL238C

YPL238C, Transcript of Dubious open reading frame, yeastyeast

Gene YPL238C, Length 390 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPL238CYPL238C CUL3P53202 744 aa2.37□□□□□ -2.03
YPL238CYPL238C YTP1P53584 459 aa2.37□□□□□ -2.03
YPL238CYPL238C MRPL13Q02204 264 aa2.37□□□□□ -2.03
YPL238CYPL238C RTT103Q05543 409 aa2.37□□□□□ -2.03
YPL238CYPL238C YDL218WQ07629 317 aa2.37□□□□□ -2.03
YPL238CYPL238C BSC1Q12140 328 aa2.37□□□□□ -2.03
YPL238CYPL238C TY2A-LR1P0C2J4 438 aa2.36□□□□□ -2.03
YPL238CYPL238C TY2A-FP0CX61 438 aa2.36□□□□□ -2.03
YPL238CYPL238C TY2A-GR2P0CX62 438 aa2.36□□□□□ -2.03
YPL238CYPL238C PGI1P12709 554 aaKnown RBP2.36□□□□□ -2.03
YPL238CYPL238C TY2A-CP25383 438 aa2.36□□□□□ -2.03
YPL238CYPL238C NAB3P38996 802 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
YPL238CYPL238C PFK26P40433 827 aaKnown RBP2.36□□□□□ -2.03
YPL238CYPL238C IST3P40565 148 aaPredicted RBP2.36□□□□□ -2.03
YPL238CYPL238C RTS2P40962 232 aa2.36□□□□□ -2.03
YPL238CYPL238C SWP82P43554 623 aa2.36□□□□□ -2.03
YPL238CYPL238C TY2A-DR2Q03483 438 aa2.36□□□□□ -2.03
YPL238CYPL238C RSF1Q05043 376 aa2.36□□□□□ -2.03
YPL238CYPL238C TY2A-BQ12260 438 aa2.36□□□□□ -2.03
YPL238CYPL238C TY2A-OR2Q12293 438 aa2.36□□□□□ -2.03
YPL238CYPL238C TY2A-DR1Q12392 438 aa2.36□□□□□ -2.03
YPL238CYPL238C TY2A-OR1Q12439 438 aa2.36□□□□□ -2.03
YPL238CYPL238C CSR2Q12734 1121 aa2.36□□□□□ -2.03
YPL238CYPL238C TY2A-DR3Q99303 438 aa2.36□□□□□ -2.03
YPL238CYPL238C CYB2P00175 591 aa2.35□□□□□ -2.03
YPL238CYPL238C HXK2P04807 486 aaKnown RBP2.35□□□□□ -2.03
YPL238CYPL238C PMS1P14242 873 aa2.35□□□□□ -2.03
YPL238CYPL238C PDA1P16387 420 aaKnown RBP2.35□□□□□ -2.03
YPL238CYPL238C MSM1P22438 575 aa2.35□□□□□ -2.03
YPL238CYPL238C SEC1P30619 724 aaKnown RBP2.35□□□□□ -2.03
YPL238CYPL238C SRB5P32585 307 aa2.35□□□□□ -2.03
YPL238CYPL238C SWE1P32944 819 aa2.35□□□□□ -2.03
YPL238CYPL238C GEX2P36173 615 aa2.35□□□□□ -2.03
YPL238CYPL238C DHH1P39517 506 aaKnown RBP2.35□□□□□ -2.03
YPL238CYPL238C ACA1P39970 489 aa2.35□□□□□ -2.03
YPL238CYPL238C RPT2P40327 437 aaKnown RBP2.35□□□□□ -2.03
YPL238CYPL238C YIR014WP40570 242 aa2.35□□□□□ -2.03
YPL238CYPL238C AZF1P41696 914 aa2.35□□□□□ -2.03
YPL238CYPL238C YFR020WP43600 232 aa2.35□□□□□ -2.03
YPL238CYPL238C IST1P53843 298 aaPredicted RBP2.35□□□□□ -2.03
YPL238CYPL238C CSL4P53859 292 aaPredicted RBP2.35□□□□□ -2.03
YPL238CYPL238C BLS1Q06071 122 aa2.35□□□□□ -2.03
YPL238CYPL238C PSR2Q07949 397 aa2.35□□□□□ -2.03
YPL238CYPL238C SPE2P21182 396 aa2.34□□□□□ -2.03
YPL238CYPL238C CLB2P24869 491 aa2.34□□□□□ -2.03
YPL238CYPL238C GID7P25569 745 aa2.34□□□□□ -2.03
YPL238CYPL238C ERG7P38604 731 aa2.34□□□□□ -2.03
YPL238CYPL238C RRP3P38712 501 aaKnown RBP2.34□□□□□ -2.03
YPL238CYPL238C UME6P39001 836 aa2.34□□□□□ -2.03
YPL238CYPL238C YJL068CP40363 299 aa2.34□□□□□ -2.03
YPL238CYPL238C YIL060WP40519 144 aa2.34□□□□□ -2.03
YPL238CYPL238C SMK1P41808 388 aa2.34□□□□□ -2.03
YPL238CYPL238C MAK10Q02197 733 aa2.34□□□□□ -2.03
YPL238CYPL238C CSR1Q06705 408 aaKnown RBP2.34□□□□□ -2.03
YPL238CYPL238C RDR1Q08904 546 aa2.34□□□□□ -2.03
YPL238CYPL238C DAP1Q12091 152 aa2.34□□□□□ -2.03
YPL238CYPL238C PCD1Q12524 340 aa2.34□□□□□ -2.03
YPL238CYPL238C YLR302CO13544 120 aa2.33□□□□□ -2.04
YPL238CYPL238C GLN3P18494 730 aa2.33□□□□□ -2.04
YPL238CYPL238C LCB1P25045 558 aaKnown RBP2.33□□□□□ -2.04
YPL238CYPL238C YCL049CP25577 312 aa2.33□□□□□ -2.04
YPL238CYPL238C TEF4P36008 412 aaKnown RBP2.33□□□□□ -2.04
YPL238CYPL238C MIC60P36112 540 aa2.33□□□□□ -2.04
YPL238CYPL238C SMC3P47037 1230 aa2.33□□□□□ -2.04
YPL238CYPL238C BUD21Q08492 214 aaPredicted RBP2.33□□□□□ -2.04
YPL238CYPL238C APL4Q12028 832 aa2.33□□□□□ -2.04
YPL238CYPL238C PRP16P15938 1071 aaPredicted RBP2.32□□□□□ -2.04
YPL238CYPL238C UBC1P21734 215 aaKnown RBP2.32□□□□□ -2.04
YPL238CYPL238C MCM4P30665 933 aaKnown RBP2.32□□□□□ -2.04
YPL238CYPL238C CNS1P33313 385 aa2.32□□□□□ -2.04
YPL238CYPL238C IFA38P38286 347 aa2.32□□□□□ -2.04
YPL238CYPL238C RGI2P40188 164 aa2.32□□□□□ -2.04
YPL238CYPL238C TPM2P40414 161 aa2.32□□□□□ -2.04
YPL238CYPL238C FET5P43561 622 aa2.32□□□□□ -2.04
YPL238CYPL238C RPN11P43588 306 aaKnown RBP2.32□□□□□ -2.04
YPL238CYPL238C DPB11P47027 764 aaPredicted RBP2.32□□□□□ -2.04
YPL238CYPL238C ARC35P53731 342 aaKnown RBP2.32□□□□□ -2.04
YPL238CYPL238C REG1Q00816 1014 aa2.32□□□□□ -2.04
YPL238CYPL238C YMR178WQ03219 274 aaKnown RBP2.32□□□□□ -2.04
YPL238CYPL238C NUS1Q12063 375 aa2.32□□□□□ -2.04
YPL238CYPL238C YOR019WQ99248 730 aa2.32□□□□□ -2.04
YPL238CYPL238C APA1P16550 321 aaKnown RBP2.31□□□□□ -2.04
YPL238CYPL238C ERG8P24521 451 aa2.31□□□□□ -2.04
YPL238CYPL238C YKL050CP35736 922 aa2.31□□□□□ -2.04
YPL238CYPL238C MIA40P36046 403 aa2.31□□□□□ -2.04
YPL238CYPL238C YBR139WP38109 508 aa2.31□□□□□ -2.04
YPL238CYPL238C BUR6P40096 142 aa2.31□□□□□ -2.04
YPL238CYPL238C RIC1P40395 1056 aa2.31□□□□□ -2.04
YPL238CYPL238C ROK1P45818 564 aaPredicted RBP2.31□□□□□ -2.04
YPL238CYPL238C YGL082WP53155 381 aa2.31□□□□□ -2.04
YPL238CYPL238C NUP100Q02629 959 aa2.31□□□□□ -2.04
YPL238CYPL238C ATG26Q06321 1198 aa2.31□□□□□ -2.04
YPL238CYPL238C YOL057WQ08225 711 aa2.31□□□□□ -2.04
YPL238CYPL238C YBR085C-AO43137 85 aa2.3□□□□□ -2.04
YPL238CYPL238C MTF2P10849 440 aa2.3□□□□□ -2.04
YPL238CYPL238C GAC1P28006 793 aa2.3□□□□□ -2.04
YPL238CYPL238C ERG1P32476 496 aaKnown RBP2.3□□□□□ -2.04
YPL238CYPL238C XRS2P33301 854 aa2.3□□□□□ -2.04
YPL238CYPL238C YNK1P36010 153 aaKnown RBP2.3□□□□□ -2.04
YPL238CYPL238C PHD1P36093 366 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms