RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP16	YPL072W	RSF1	Q05043	376 aa		3	□□□□□ -1.93
UBP16	YPL072W	BLS1	Q06071	122 aa		3	□□□□□ -1.93
UBP16	YPL072W	COG4	Q06096	861 aa		3	□□□□□ -1.93
UBP16	YPL072W	YLR352W	Q06479	807 aa		3	□□□□□ -1.93
UBP16	YPL072W	RAP1	P11938	827 aa		2.99	□□□□□ -1.93
UBP16	YPL072W	NCP1	P16603	691 aa	Known RBP	2.99	□□□□□ -1.93
UBP16	YPL072W	MSM1	P22438	575 aa		2.99	□□□□□ -1.93
UBP16	YPL072W	CLB2	P24869	491 aa		2.99	□□□□□ -1.93
UBP16	YPL072W	GFD2	P25370	566 aa	Known RBP	2.99	□□□□□ -1.93
UBP16	YPL072W	SWP82	P43554	623 aa		2.99	□□□□□ -1.93
UBP16	YPL072W	CRZ1	P53968	678 aa		2.99	□□□□□ -1.93
UBP16	YPL072W	MAK10	Q02197	733 aa		2.99	□□□□□ -1.93
UBP16	YPL072W	YML131W	Q03102	365 aa		2.99	□□□□□ -1.93
UBP16	YPL072W	EKI1	Q03764	534 aa		2.99	□□□□□ -1.93
UBP16	YPL072W	SSM4	P40318	1319 aa		2.99	□□□□□ -1.93
UBP16	YPL072W	BAR1	P12630	587 aa		2.98	□□□□□ -1.93
UBP16	YPL072W	KRS1	P15180	591 aa	Known RBP	2.98	□□□□□ -1.93
UBP16	YPL072W	APA1	P16550	321 aa	Known RBP	2.98	□□□□□ -1.93
UBP16	YPL072W	MRPL36	P36531	177 aa		2.98	□□□□□ -1.93
UBP16	YPL072W	NOC2	P39744	710 aa	Known RBP	2.98	□□□□□ -1.93
UBP16	YPL072W	ECM10	P39987	644 aa		2.98	□□□□□ -1.93
UBP16	YPL072W	RTS2	P40962	232 aa		2.98	□□□□□ -1.93
UBP16	YPL072W	ASE1	P50275	885 aa		2.98	□□□□□ -1.93
UBP16	YPL072W	RSM28	Q03430	361 aa		2.98	□□□□□ -1.93
UBP16	YPL072W	TIP41	Q12199	356 aa		2.98	□□□□□ -1.93
UBP16	YPL072W	PMS1	P14242	873 aa		2.98	□□□□□ -1.93
UBP16	YPL072W	RFC1	P38630	861 aa	Known RBP	2.98	□□□□□ -1.93
UBP16	YPL072W	YIR014W	P40570	242 aa		2.98	□□□□□ -1.93
UBP16	YPL072W	YTP1	P53584	459 aa		2.98	□□□□□ -1.93
UBP16	YPL072W	GTR1	Q00582	310 aa		2.98	□□□□□ -1.93
UBP16	YPL072W	BSC1	Q12140	328 aa		2.98	□□□□□ -1.93
UBP16	YPL072W	EDE1	P34216	1381 aa		2.97	□□□□□ -1.93
UBP16	YPL072W	YML002W	P0CF17	737 aa		2.97	□□□□□ -1.93
UBP16	YPL072W	RPB8	P20436	146 aa		2.97	□□□□□ -1.93
UBP16	YPL072W	RER1	P25560	188 aa		2.97	□□□□□ -1.93
UBP16	YPL072W	YCL049C	P25577	312 aa		2.97	□□□□□ -1.93
UBP16	YPL072W	SRB5	P32585	307 aa		2.97	□□□□□ -1.93
UBP16	YPL072W	RIM2	P38127	377 aa		2.97	□□□□□ -1.93
UBP16	YPL072W	PSY4	P38193	441 aa		2.97	□□□□□ -1.93
UBP16	YPL072W	RPT2	P40327	437 aa	Known RBP	2.97	□□□□□ -1.93
UBP16	YPL072W	SMK1	P41808	388 aa		2.97	□□□□□ -1.93
UBP16	YPL072W	OPY2	Q06810	360 aa		2.97	□□□□□ -1.93
UBP16	YPL072W	COX17	Q12287	69 aa		2.97	□□□□□ -1.93
UBP16	YPL072W	TY2A-LR1	P0C2J4	438 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	TY2A-F	P0CX61	438 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	TY2A-GR2	P0CX62	438 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	TY2A-C	P25383	438 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	CHS3	P29465	1165 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	TRS65	P32893	560 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	MFT1	P33441	392 aa	Known RBP	2.96	□□□□□ -1.94
UBP16	YPL072W	TFC3	P34111	1160 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	STV1	P37296	890 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	KAP123	P40069	1113 aa	Known RBP	2.96	□□□□□ -1.94
UBP16	YPL072W	PSF2	P40359	213 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	TMA108	P40462	946 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	COG1	P53079	417 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	MRPL13	Q02204	264 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	SVL3	Q03088	825 aa	Known RBP	2.96	□□□□□ -1.94
UBP16	YPL072W	TY2A-DR2	Q03483	438 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	SSP2	Q08646	371 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	TMA16	Q08687	178 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	TY2A-B	Q12260	438 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	TY2A-OR2	Q12293	438 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	TY2A-DR1	Q12392	438 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	TY2A-OR1	Q12439	438 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	TY2A-DR3	Q99303	438 aa		2.96	□□□□□ -1.94
UBP16	YPL072W	NUC1	P08466	329 aa		2.95	□□□□□ -1.94
UBP16	YPL072W	GID7	P25569	745 aa		2.95	□□□□□ -1.94
UBP16	YPL072W	GAC1	P28006	793 aa		2.95	□□□□□ -1.94
UBP16	YPL072W	XRS2	P33301	854 aa		2.95	□□□□□ -1.94
UBP16	YPL072W	JNM1	P36224	373 aa		2.95	□□□□□ -1.94
UBP16	YPL072W	UME6	P39001	836 aa		2.95	□□□□□ -1.94
UBP16	YPL072W	RGI2	P40188	164 aa		2.95	□□□□□ -1.94
UBP16	YPL072W	FET5	P43561	622 aa		2.95	□□□□□ -1.94
UBP16	YPL072W	YFR020W	P43600	232 aa		2.95	□□□□□ -1.94
UBP16	YPL072W	ARC35	P53731	342 aa	Known RBP	2.95	□□□□□ -1.94
UBP16	YPL072W	YMR178W	Q03219	274 aa	Known RBP	2.95	□□□□□ -1.94
UBP16	YPL072W	YDR415C	Q04033	374 aa	Predicted RBP	2.95	□□□□□ -1.94
UBP16	YPL072W	DAP1	Q12091	152 aa		2.95	□□□□□ -1.94
UBP16	YPL072W	INH1	P01097	85 aa		2.94	□□□□□ -1.94
UBP16	YPL072W	TPK1	P06244	397 aa		2.94	□□□□□ -1.94
UBP16	YPL072W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	2.94	□□□□□ -1.94	not detected
UBP16	YPL072W	RAD16	P31244	790 aa		2.94	□□□□□ -1.94
UBP16	YPL072W	SLC1	P33333	303 aa		2.94	□□□□□ -1.94
UBP16	YPL072W	DHH1	P39517	506 aa	Known RBP	2.94	□□□□□ -1.94
UBP16	YPL072W	IST1	P53843	298 aa	Predicted RBP	2.94	□□□□□ -1.94
UBP16	YPL072W	CIA1	Q05583	330 aa		2.94	□□□□□ -1.94
UBP16	YPL072W	YDL218W	Q07629	317 aa		2.94	□□□□□ -1.94
UBP16	YPL072W	ERG27	Q12452	347 aa	Known RBP	2.94	□□□□□ -1.94
UBP16	YPL072W	PCD1	Q12524	340 aa		2.94	□□□□□ -1.94
UBP16	YPL072W	MTF2	P10849	440 aa		2.93	□□□□□ -1.94
UBP16	YPL072W	GLN3	P18494	730 aa		2.93	□□□□□ -1.94
UBP16	YPL072W	MCM10	P32354	571 aa		2.93	□□□□□ -1.94
UBP16	YPL072W	MIA40	P36046	403 aa		2.93	□□□□□ -1.94
UBP16	YPL072W	ESL2	P36168	1195 aa		2.93	□□□□□ -1.94
UBP16	YPL072W	PHO90	P39535	881 aa		2.93	□□□□□ -1.94
UBP16	YPL072W	IMP4	P53941	290 aa	Known RBP	2.93	□□□□□ -1.94
UBP16	YPL072W	FCP1	Q03254	732 aa		2.93	□□□□□ -1.94
UBP16	YPL072W	YBR298C-A	Q8TGK4	73 aa		2.93	□□□□□ -1.94
UBP16	YPL072W	UBC1	P21734	215 aa	Known RBP	2.93	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms