RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C YBR138CP38277 524 aa3.17□□□□□ -1.9
SSN8YNL025C TDP1P38319 544 aa3.17□□□□□ -1.9
SSN8YNL025C YBR259WP38338 688 aa3.17□□□□□ -1.9
SSN8YNL025C PCL5P38794 229 aa3.17□□□□□ -1.9
SSN8YNL025C YHR097CP38809 366 aaKnown RBP3.17□□□□□ -1.9
SSN8YNL025C TOM71P38825 639 aaKnown RBP3.17□□□□□ -1.9
SSN8YNL025C BEM4P39011 633 aa3.17□□□□□ -1.9
SSN8YNL025C ECM1P39715 212 aa3.17□□□□□ -1.9
SSN8YNL025C FMP52P40008 231 aa3.17□□□□□ -1.9
SSN8YNL025C MRX1P40050 688 aa3.17□□□□□ -1.9
SSN8YNL025C RGI2P40188 164 aa3.17□□□□□ -1.9
SSN8YNL025C UTP18P40362 594 aaPredicted RBP3.17□□□□□ -1.9
SSN8YNL025C MET18P40469 1032 aa3.17□□□□□ -1.9
SSN8YNL025C ULP2P40537 1034 aaPredicted RBP3.17□□□□□ -1.9
SSN8YNL025C INA22P40576 216 aa3.17□□□□□ -1.9
SSN8YNL025C MAD2P40958 196 aa3.17□□□□□ -1.9
SSN8YNL025C BAP3P41815 604 aa3.17□□□□□ -1.9
SSN8YNL025C PXA1P41909 870 aa3.17□□□□□ -1.9
SSN8YNL025C PFA3P42836 336 aa3.17□□□□□ -1.9
SSN8YNL025C CAK1P43568 368 aaPredicted RBP3.17□□□□□ -1.9
SSN8YNL025C ALK1P43633 760 aaKnown RBP3.17□□□□□ -1.9
SSN8YNL025C MNT2P53059 558 aa3.17□□□□□ -1.9
SSN8YNL025C DSD1P53095 428 aa3.17□□□□□ -1.9
SSN8YNL025C IMO32P53219 342 aa3.17□□□□□ -1.9
SSN8YNL025C YGR054WP53235 642 aaKnown RBP3.17□□□□□ -1.9
SSN8YNL025C YGR111WP53265 400 aa3.17□□□□□ -1.9
SSN8YNL025C DCP2P53550 970 aaKnown RBP3.17□□□□□ -1.9
SSN8YNL025C YNL144CP53907 740 aa3.17□□□□□ -1.9
SSN8YNL025C INP2Q03824 705 aa3.17□□□□□ -1.9
SSN8YNL025C THI22Q06490 572 aa3.17□□□□□ -1.9
SSN8YNL025C ARR1Q06596 294 aa3.17□□□□□ -1.9
SSN8YNL025C YLR413WQ06689 675 aa3.17□□□□□ -1.9
SSN8YNL025C DCI1Q08558 271 aa3.17□□□□□ -1.9
SSN8YNL025C VPS54Q12071 889 aa3.17□□□□□ -1.9
SSN8YNL025C CHS5Q12114 671 aaKnown RBP3.17□□□□□ -1.9
SSN8YNL025C COX17Q12287 69 aa3.17□□□□□ -1.9
SSN8YNL025C YDR061WQ12298 539 aa3.17□□□□□ -1.9
SSN8YNL025C YNL162W-AQ3E7A8 72 aa3.17□□□□□ -1.9
SSN8YNL025C AFI1Q99222 893 aa3.17□□□□□ -1.9
SSN8YNL025C CET1O13297 549 aaPredicted RBP3.16□□□□□ -1.9
SSN8YNL025C PRC1P00729 532 aa3.16□□□□□ -1.9
SSN8YNL025C RPS17AP02407 136 aaKnown RBP3.16□□□□□ -1.9
SSN8YNL025C RPL1AP0CX43 217 aaKnown RBP3.16□□□□□ -1.9
SSN8YNL025C RPL1BP0CX44 217 aaKnown RBP3.16□□□□□ -1.9
SSN8YNL025C RPS17BP14127 136 aaKnown RBP3.16□□□□□ -1.9
SSN8YNL025C CDC26P14724 124 aa3.16□□□□□ -1.9
SSN8YNL025C TAL1P15019 335 aaKnown RBP3.16□□□□□ -1.9
SSN8YNL025C KIN3P22209 435 aa3.16□□□□□ -1.9
SSN8YNL025C PRD1P25375 712 aa3.16□□□□□ -1.9
SSN8YNL025C MRP20P32387 263 aa3.16□□□□□ -1.9
SSN8YNL025C GCD7P32502 381 aaPredicted RBP3.16□□□□□ -1.9
SSN8YNL025C DOA4P32571 926 aa3.16□□□□□ -1.9
SSN8YNL025C SET3P36124 751 aa3.16□□□□□ -1.9
SSN8YNL025C CST26P38226 397 aa3.16□□□□□ -1.9
SSN8YNL025C SLX1P38324 304 aa3.16□□□□□ -1.9
SSN8YNL025C SAK1P38990 1142 aa3.16□□□□□ -1.9
SSN8YNL025C ARB1P40024 610 aaKnown RBP3.16□□□□□ -1.9
SSN8YNL025C EFM4P40516 257 aa3.16□□□□□ -1.9
SSN8YNL025C MET28P40573 187 aa3.16□□□□□ -1.9
SSN8YNL025C FET5P43561 622 aa3.16□□□□□ -1.9
SSN8YNL025C RAD17P48581 401 aa3.16□□□□□ -1.9
SSN8YNL025C GLO1P50107 326 aa3.16□□□□□ -1.9
SSN8YNL025C VPS4P52917 437 aa3.16□□□□□ -1.9
SSN8YNL025C BRE5P53741 515 aaKnown RBP3.16□□□□□ -1.9
SSN8YNL025C PDR16P53860 351 aaKnown RBP3.16□□□□□ -1.9
SSN8YNL025C PNG1Q02890 363 aa3.16□□□□□ -1.9
SSN8YNL025C KAP120Q02932 1032 aa3.16□□□□□ -1.9
SSN8YNL025C SNZ1Q03148 297 aa3.16□□□□□ -1.9
SSN8YNL025C ATC1Q04005 294 aa3.16□□□□□ -1.9
SSN8YNL025C RAD30Q04049 632 aa3.16□□□□□ -1.9
SSN8YNL025C PPM1Q04081 328 aa3.16□□□□□ -1.9
SSN8YNL025C ROY1Q04847 553 aa3.16□□□□□ -1.9
SSN8YNL025C DON1Q05610 365 aa3.16□□□□□ -1.9
SSN8YNL025C YLR407WQ06070 228 aa3.16□□□□□ -1.9
SSN8YNL025C MMR1Q06324 491 aa3.16□□□□□ -1.9
SSN8YNL025C BCP1Q06338 283 aa3.16□□□□□ -1.9
SSN8YNL025C FMP45Q07651 309 aa3.16□□□□□ -1.9
SSN8YNL025C IRC13Q08630 104 aa3.16□□□□□ -1.9
SSN8YNL025C SWT1Q12104 458 aa3.16□□□□□ -1.9
SSN8YNL025C YOR022CQ12204 715 aa3.16□□□□□ -1.9
SSN8YNL025C YJR112W-AQ3E743 109 aa3.16□□□□□ -1.9
SSN8YNL025C GCD2P12754 651 aaPredicted RBP3.15□□□□□ -1.91
SSN8YNL025C MCM4P30665 933 aaKnown RBP3.15□□□□□ -1.91
SSN8YNL025C SYN8P31377 255 aa3.15□□□□□ -1.91
SSN8YNL025C PPZ2P33329 710 aa3.15□□□□□ -1.91
SSN8YNL025C RIX1P38883 763 aaPredicted RBP3.15□□□□□ -1.91
SSN8YNL025C CHS6P40955 746 aa3.15□□□□□ -1.91
SSN8YNL025C AAD10P47182 288 aa3.15□□□□□ -1.91
SSN8YNL025C UBC11P52492 156 aa3.15□□□□□ -1.91
SSN8YNL025C VID30P53076 958 aa3.15□□□□□ -1.91
SSN8YNL025C COG1P53079 417 aa3.15□□□□□ -1.91
SSN8YNL025C CUE3P53137 624 aaKnown RBP3.15□□□□□ -1.91
SSN8YNL025C LCL3P53153 274 aa3.15□□□□□ -1.91
SSN8YNL025C YNR071CP53757 342 aa3.15□□□□□ -1.91
SSN8YNL025C DSL1P53847 754 aa3.15□□□□□ -1.91
SSN8YNL025C SQS1P53866 767 aaKnown RBP3.15□□□□□ -1.91
SSN8YNL025C SMX3P54999 86 aaPredicted RBP3.15□□□□□ -1.91
SSN8YNL025C MUB1Q03162 620 aa3.15□□□□□ -1.91
SSN8YNL025C LRS4Q04087 347 aaKnown RBP3.15□□□□□ -1.91
SSN8YNL025C SEG1Q04279 960 aa3.15□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 69.4 ms