RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C KTR3P38130 404 aaPredicted RBP3.98□□□□□ -1.77
SSO2YMR183C YPT10P38146 199 aa3.98□□□□□ -1.77
SSO2YMR183C REG2P38232 338 aa3.98□□□□□ -1.77
SSO2YMR183C RRF1P38771 230 aa3.98□□□□□ -1.77
SSO2YMR183C VFA1P40080 203 aa3.98□□□□□ -1.77
SSO2YMR183C PFK26P40433 827 aaKnown RBP3.98□□□□□ -1.77
SSO2YMR183C FYV8P46949 817 aaKnown RBP3.98□□□□□ -1.77
SSO2YMR183C ZAP1P47043 880 aa3.98□□□□□ -1.77
SSO2YMR183C OAZ1Q02803 292 aa3.98□□□□□ -1.77
SSO2YMR183C LYS21Q12122 440 aaKnown RBP3.98□□□□□ -1.77
SSO2YMR183C FRE6Q12473 712 aa3.98□□□□□ -1.77
SSO2YMR183C CTT1P06115 562 aa3.97□□□□□ -1.77
SSO2YMR183C RPC40P07703 335 aaKnown RBP3.97□□□□□ -1.77
SSO2YMR183C AQY1P0CD91 305 aa3.97□□□□□ -1.77
SSO2YMR183C PET122P10355 254 aa3.97□□□□□ -1.77
SSO2YMR183C SEC12P11655 471 aa3.97□□□□□ -1.77
SSO2YMR183C BIK1P11709 440 aa3.97□□□□□ -1.77
SSO2YMR183C APE1P14904 514 aa3.97□□□□□ -1.77
SSO2YMR183C RRP7P25368 297 aaPredicted RBP3.97□□□□□ -1.77
SSO2YMR183C MGM1P32266 881 aa3.97□□□□□ -1.77
SSO2YMR183C SMI1P32566 505 aa3.97□□□□□ -1.77
SSO2YMR183C YHR218WP38899 603 aa3.97□□□□□ -1.77
SSO2YMR183C PSD1P39006 500 aa3.97□□□□□ -1.77
SSO2YMR183C ZIM17P42844 174 aa3.97□□□□□ -1.77
SSO2YMR183C YFL015CP43578 164 aa3.97□□□□□ -1.77
SSO2YMR183C TLG1Q03322 224 aa3.97□□□□□ -1.77
SSO2YMR183C TRS31Q03337 283 aa3.97□□□□□ -1.77
SSO2YMR183C RSF1Q05043 376 aa3.97□□□□□ -1.77
SSO2YMR183C SKG3Q06315 1026 aa3.97□□□□□ -1.77
SSO2YMR183C ICL2Q12031 575 aa3.97□□□□□ -1.77
SSO2YMR183C NMD4Q12129 218 aa3.97□□□□□ -1.77
SSO2YMR183C GRX6Q12438 231 aa3.97□□□□□ -1.77
SSO2YMR183C YOL159C-AQ3E769 90 aa3.97□□□□□ -1.77
SSO2YMR183C SWR1Q05471 1514 aa3.96□□□□□ -1.78
SSO2YMR183C ATP2P00830 511 aaKnown RBP3.96□□□□□ -1.78
SSO2YMR183C MDH1P17505 334 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
SSO2YMR183C REC107P21651 314 aa3.96□□□□□ -1.78
SSO2YMR183C SWC3P31376 625 aa3.96□□□□□ -1.78
SSO2YMR183C GCD7P32502 381 aaPredicted RBP3.96□□□□□ -1.78
SSO2YMR183C DSS4P32601 143 aa3.96□□□□□ -1.78
SSO2YMR183C APD1P38281 316 aa3.96□□□□□ -1.78
SSO2YMR183C EXO1P39875 702 aa3.96□□□□□ -1.78
SSO2YMR183C PCL7P40186 285 aa3.96□□□□□ -1.78
SSO2YMR183C ULP2P40537 1034 aaPredicted RBP3.96□□□□□ -1.78
SSO2YMR183C OPT1P40897 799 aa3.96□□□□□ -1.78
SSO2YMR183C YJL043WP47053 257 aa3.96□□□□□ -1.78
SSO2YMR183C CSL4P53859 292 aaPredicted RBP3.96□□□□□ -1.78
SSO2YMR183C JJJ1P53863 590 aa3.96□□□□□ -1.78
SSO2YMR183C EOS1P53938 366 aa3.96□□□□□ -1.78
SSO2YMR183C ADA2Q02336 434 aa3.96□□□□□ -1.78
SSO2YMR183C YPL107WQ02873 248 aa3.96□□□□□ -1.78
SSO2YMR183C HOT1Q03213 719 aa3.96□□□□□ -1.78
SSO2YMR183C RIM20Q12033 661 aa3.96□□□□□ -1.78
SSO2YMR183C NUS1Q12063 375 aa3.96□□□□□ -1.78
SSO2YMR183C AAC1P04710 309 aa3.95□□□□□ -1.78
SSO2YMR183C ERG8P24521 451 aa3.95□□□□□ -1.78
SSO2YMR183C MRPL9P31334 269 aa3.95□□□□□ -1.78
SSO2YMR183C SWH1P35845 1188 aa3.95□□□□□ -1.78
SSO2YMR183C UBP11P36026 717 aa3.95□□□□□ -1.78
SSO2YMR183C ALY1P36117 915 aa3.95□□□□□ -1.78
SSO2YMR183C RTS1P38903 757 aa3.95□□□□□ -1.78
SSO2YMR183C SMF1P38925 575 aa3.95□□□□□ -1.78
SSO2YMR183C YEL057CP39983 233 aa3.95□□□□□ -1.78
SSO2YMR183C ARB1P40024 610 aaKnown RBP3.95□□□□□ -1.78
SSO2YMR183C MET18P40469 1032 aa3.95□□□□□ -1.78
SSO2YMR183C DOT5P40553 215 aa3.95□□□□□ -1.78
SSO2YMR183C BUD27P43573 796 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
SSO2YMR183C AAD10P47182 288 aa3.95□□□□□ -1.78
SSO2YMR183C VPS4P52917 437 aa3.95□□□□□ -1.78
SSO2YMR183C ATP23P53722 227 aa3.95□□□□□ -1.78
SSO2YMR183C BNI5P53890 448 aaKnown RBP3.95□□□□□ -1.78
SSO2YMR183C WAR1Q03631 944 aa3.95□□□□□ -1.78
SSO2YMR183C YMR111CQ04461 462 aaPredicted RBP3.95□□□□□ -1.78
SSO2YMR183C VAM6Q07468 1049 aa3.95□□□□□ -1.78
SSO2YMR183C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
SSO2YMR183C RIX7Q07844 837 aaKnown RBP3.95□□□□□ -1.78
SSO2YMR183C KEL3Q08979 651 aaPredicted RBP3.95□□□□□ -1.78
SSO2YMR183C SUL2Q12325 893 aa3.95□□□□□ -1.78
SSO2YMR183C KAR3P17119 729 aa3.94□□□□□ -1.78
SSO2YMR183C POL4P25615 582 aa3.94□□□□□ -1.78
SSO2YMR183C YCR051WP25631 222 aa3.94□□□□□ -1.78
SSO2YMR183C GSY2P27472 705 aa3.94□□□□□ -1.78
SSO2YMR183C UIP5P36137 443 aa3.94□□□□□ -1.78
SSO2YMR183C LAS1P36146 502 aaPredicted RBP3.94□□□□□ -1.78
SSO2YMR183C STB5P38699 743 aa3.94□□□□□ -1.78
SSO2YMR183C JHD1P40034 492 aa3.94□□□□□ -1.78
SSO2YMR183C RGI2P40188 164 aa3.94□□□□□ -1.78
SSO2YMR183C PSA1P41940 361 aaKnown RBP3.94□□□□□ -1.78
SSO2YMR183C SKP2P42843 763 aa3.94□□□□□ -1.78
SSO2YMR183C TDA10P42938 290 aa3.94□□□□□ -1.78
SSO2YMR183C GAT1P43574 510 aa3.94□□□□□ -1.78
SSO2YMR183C NMD5P46970 1048 aa3.94□□□□□ -1.78
SSO2YMR183C ASE1P50275 885 aa3.94□□□□□ -1.78
SSO2YMR183C CUL3P53202 744 aa3.94□□□□□ -1.78
SSO2YMR183C TAM41P53230 385 aa3.94□□□□□ -1.78
SSO2YMR183C HST1P53685 503 aa3.94□□□□□ -1.78
SSO2YMR183C YPL108WQ02872 168 aaPredicted RBP3.94□□□□□ -1.78
SSO2YMR183C DPB4Q04603 196 aaKnown RBP3.94□□□□□ -1.78
SSO2YMR183C ECM22Q05958 814 aaPredicted RBP3.94□□□□□ -1.78
SSO2YMR183C TMA16Q08687 178 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms