RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	YBR085C-A	O43137	85 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	SEC53	P07283	254 aa	Known RBP	1.54	□□□□□ -2.16
SMC4	YLR086W	PRE8	P23639	250 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	UBP13	P38187	747 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	YGR079W	P53249	370 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	RBG2	P53295	368 aa	Known RBP	1.54	□□□□□ -2.16
SMC4	YLR086W	YMR178W	Q03219	274 aa	Known RBP	1.54	□□□□□ -2.16
SMC4	YLR086W	RSM28	Q03430	361 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	YDR131C	Q03899	556 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	YLR455W	Q06188	304 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	RTT109	Q07794	436 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	ULA1	Q12059	462 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	GET3	Q12154	354 aa	Known RBP	1.54	□□□□□ -2.16
SMC4	YLR086W	YBR126W-A	Q8TGU7	68 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	FOB1	O13329	566 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	YPT1	P01123	206 aa	Known RBP	1.54	□□□□□ -2.16
SMC4	YLR086W	RPA135	P22138	1203 aa	Known RBP	1.54	□□□□□ -2.16
SMC4	YLR086W	ROX1	P25042	368 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	PUP3	P25451	205 aa	Known RBP	1.54	□□□□□ -2.16
SMC4	YLR086W	GSH1	P32477	678 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	SSE2	P32590	693 aa	Known RBP	1.54	□□□□□ -2.16
SMC4	YLR086W	MIA40	P36046	403 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	ALY1	P36117	915 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	ARP1	P38696	384 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	DPB11	P47027	764 aa	Predicted RBP	1.54	□□□□□ -2.16
SMC4	YLR086W	ZAP1	P47043	880 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	ASN1	P49089	572 aa	Known RBP	1.54	□□□□□ -2.16
SMC4	YLR086W	REG1	Q00816	1014 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	MRH1	Q12117	320 aa	Predicted RBP	1.54	□□□□□ -2.16
SMC4	YLR086W	CDC25	P04821	1589 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	ATG2	P53855	1592 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	PAN1	P32521	1480 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	YPK1	P12688	680 aa	Known RBP	1.54	□□□□□ -2.16
SMC4	YLR086W	STE12	P13574	688 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	KIN3	P22209	435 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	SYN8	P31377	255 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	NIP1	P32497	812 aa	Known RBP	1.54	□□□□□ -2.16
SMC4	YLR086W	GDA1	P32621	518 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	NDE1	P40215	560 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	STU2	P46675	888 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	SWF1	Q04629	336 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	YLR287C	Q05881	355 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	UTP21	Q06078	939 aa	Predicted RBP	1.54	□□□□□ -2.16
SMC4	YLR086W	CRN1	Q06440	651 aa		1.54	□□□□□ -2.16
SMC4	YLR086W	MDM20	Q12387	796 aa	Known RBP	1.54	□□□□□ -2.16
SMC4	YLR086W	PNO1	Q99216	274 aa	Known RBP	1.54	□□□□□ -2.16
SMC4	YLR086W	SRB8	P25648	1427 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	YCK1	P23291	538 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	ADY2	P25613	283 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	GYP6	P32806	458 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	OCT1	P35999	772 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	AUR1	P36107	401 aa	Predicted RBP	1.53	□□□□□ -2.16
SMC4	YLR086W	ARN1	P38731	627 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	FUN12	P39730	1002 aa	Known RBP	1.53	□□□□□ -2.16
SMC4	YLR086W	PFK26	P40433	827 aa	Known RBP	1.53	□□□□□ -2.16
SMC4	YLR086W	VMA13	P41807	478 aa	Known RBP	1.53	□□□□□ -2.16
SMC4	YLR086W	BPL1	P48445	690 aa	Predicted RBP	1.53	□□□□□ -2.16
SMC4	YLR086W	MRX6	P48564	524 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	GND2	P53319	492 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	MAK10	Q02197	733 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	UBP16	Q02863	499 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	YML119W	Q03208	357 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	COQ11	Q05892	277 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	ARO10	Q06408	635 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	SWA2	Q06677	668 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	TAH18	Q12181	623 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	NDJ1	Q12366	352 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	ADE5,7	P07244	802 aa	Known RBP	1.53	□□□□□ -2.16
SMC4	YLR086W	PDX1	P16451	410 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	MBR1	P23493	339 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	YIH1	P25637	258 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	SAC1	P32368	623 aa	Known RBP	1.53	□□□□□ -2.16
SMC4	YLR086W	YBL029W	P38201	376 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	VID24	P38263	362 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	CBR1	P38626	284 aa	Known RBP	1.53	□□□□□ -2.16
SMC4	YLR086W	PHO90	P39535	881 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	AXL1	P40851	1208 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	GLO1	P50107	326 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	YGR127W	P53275	312 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	ADE16	P54113	591 aa	Known RBP	1.53	□□□□□ -2.16
SMC4	YLR086W	TAP42	Q04372	366 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	VIP1	Q06685	1146 aa	Known RBP	1.53	□□□□□ -2.16
SMC4	YLR086W	INP53	Q12271	1107 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	ERP4	Q12450	207 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	AVL9	Q12500	764 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	YPT6	Q99260	215 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	SNT2	P53127	1403 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	HEM1	P09950	548 aa	Predicted RBP	1.53	□□□□□ -2.16
SMC4	YLR086W	MRP2	P10663	115 aa	Predicted RBP	1.53	□□□□□ -2.16
SMC4	YLR086W	GPI10	P30777	616 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	YMC1	P32331	307 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	MPE1	P35728	441 aa	Known RBP	1.53	□□□□□ -2.16
SMC4	YLR086W	FTH1	P38310	465 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	LEU5	P38702	357 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	LNP1	P38878	278 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	SPO22	P40511	975 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	CFD1	P40558	293 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	UBX6	P47049	396 aa		1.53	□□□□□ -2.16
SMC4	YLR086W	LYS20	P48570	428 aa	Known RBP	1.53	□□□□□ -2.16
SMC4	YLR086W	TOM22	P49334	152 aa		1.53	□□□□□ -2.16

Retrieved 100 of 5,963 RNA–protein pairs in 47 ms