RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W MSE1P48525 536 aa3.85□□□□□ -1.79
UBP12YJL197W CTR1P49573 406 aa3.85□□□□□ -1.79
UBP12YJL197W STP3Q05937 343 aa3.85□□□□□ -1.79
UBP12YJL197W SPH1Q06160 661 aa3.85□□□□□ -1.79
UBP12YJL197W UAF30Q08747 228 aa3.85□□□□□ -1.79
UBP12YJL197W CFT2Q12102 859 aaPredicted RBP3.85□□□□□ -1.79
UBP12YJL197W YSW1P38280 609 aa3.85□□□□□ -1.79
UBP12YJL197W WSS1P38838 269 aa3.85□□□□□ -1.79
UBP12YJL197W YDR089WP38966 869 aa3.85□□□□□ -1.79
UBP12YJL197W LCL3P53153 274 aa3.85□□□□□ -1.79
UBP12YJL197W MNP1P53163 194 aaPredicted RBP3.85□□□□□ -1.79
UBP12YJL197W YNL144CP53907 740 aa3.85□□□□□ -1.79
UBP12YJL197W SLU7Q02775 382 aaKnown RBP3.85□□□□□ -1.79
UBP12YJL197W NOP6Q07623 225 aaKnown RBP3.85□□□□□ -1.79
UBP12YJL197W GPN2Q08726 347 aaPredicted RBP3.85□□□□□ -1.79
UBP12YJL197W QCR6P00127 147 aa3.84□□□□□ -1.79
UBP12YJL197W MF(ALPHA)1P01149 165 aa3.84□□□□□ -1.79
UBP12YJL197W GAL80P04387 435 aa3.84□□□□□ -1.79
UBP12YJL197W BCS1P32839 456 aa3.84□□□□□ -1.79
UBP12YJL197W YME2P32843 850 aa3.84□□□□□ -1.79
UBP12YJL197W TCD2P36101 447 aaKnown RBP3.84□□□□□ -1.79
UBP12YJL197W SLM4P38247 162 aa3.84□□□□□ -1.79
UBP12YJL197W OSW5P40219 148 aa3.84□□□□□ -1.79
UBP12YJL197W INP52P50942 1183 aa3.84□□□□□ -1.79
UBP12YJL197W CWC21Q03375 135 aaKnown RBP3.84□□□□□ -1.79
UBP12YJL197W BMS1Q08965 1183 aaKnown RBP3.84□□□□□ -1.79
UBP12YJL197W HMI1Q12039 706 aa3.84□□□□□ -1.79
UBP12YJL197W DBP3P20447 523 aaKnown RBP3.84□□□□□ -1.79
UBP12YJL197W DIA4P38705 446 aaPredicted RBP3.84□□□□□ -1.79
UBP12YJL197W MUP3P38734 546 aa3.84□□□□□ -1.79
UBP12YJL197W SGN1P40561 250 aaKnown RBP RIP-Chip data3.84□□□□□ -1.79not detected
UBP12YJL197W URB2P47108 1174 aa3.84□□□□□ -1.79
UBP12YJL197W MTL1P53214 551 aa3.84□□□□□ -1.79
UBP12YJL197W USA1Q03714 838 aa3.84□□□□□ -1.79
UBP12YJL197W LPX1Q12405 387 aaKnown RBP3.84□□□□□ -1.79
UBP12YJL197W NPC2Q12408 173 aa3.84□□□□□ -1.79
UBP12YJL197W AI1P03875 834 aa3.84□□□□□ -1.8
UBP12YJL197W AFG1P32317 509 aa3.84□□□□□ -1.8
UBP12YJL197W PPQ1P32945 549 aa3.84□□□□□ -1.8
UBP12YJL197W YIR042CP40586 236 aa3.84□□□□□ -1.8
UBP12YJL197W ALK1P43633 760 aaKnown RBP3.84□□□□□ -1.8
UBP12YJL197W SMC3P47037 1230 aa3.84□□□□□ -1.8
UBP12YJL197W IMO32P53219 342 aa3.84□□□□□ -1.8
UBP12YJL197W YAT1P80235 687 aa3.84□□□□□ -1.8
UBP12YJL197W HEL2Q05580 639 aaKnown RBP3.84□□□□□ -1.8
UBP12YJL197W NOP12Q08208 459 aaKnown RBP3.84□□□□□ -1.8
UBP12YJL197W TFB5Q3E7C1 72 aaPredicted RBP3.84□□□□□ -1.8
UBP12YJL197W RML2P32611 393 aa3.83□□□□□ -1.8
UBP12YJL197W FAR3P46671 204 aa3.83□□□□□ -1.8
UBP12YJL197W AMA1P50082 593 aa3.83□□□□□ -1.8
UBP12YJL197W ALF1P53904 254 aa3.83□□□□□ -1.8
UBP12YJL197W LEU9Q12166 604 aaKnown RBP3.83□□□□□ -1.8
UBP12YJL197W YIL002W-AQ3E7Z5 69 aa3.83□□□□□ -1.8
UBP12YJL197W HIP1P06775 603 aa3.83□□□□□ -1.8
UBP12YJL197W PDA1P16387 420 aaKnown RBP3.83□□□□□ -1.8
UBP12YJL197W PHO91P27514 894 aa3.83□□□□□ -1.8
UBP12YJL197W IDH2P28241 369 aaKnown RBP3.83□□□□□ -1.8
UBP12YJL197W SPC110P32380 944 aa3.83□□□□□ -1.8
UBP12YJL197W MSS1P32559 526 aaPredicted RBP3.83□□□□□ -1.8
UBP12YJL197W MCX1P38323 520 aaPredicted RBP3.83□□□□□ -1.8
UBP12YJL197W PHM8P40025 321 aa3.83□□□□□ -1.8
UBP12YJL197W RFX1P48743 811 aa3.83□□□□□ -1.8
UBP12YJL197W VPS62P53285 467 aa3.83□□□□□ -1.8
UBP12YJL197W DCP2P53550 970 aaKnown RBP3.83□□□□□ -1.8
UBP12YJL197W YNR014WP53719 212 aa3.83□□□□□ -1.8
UBP12YJL197W SKO1Q02100 647 aa3.83□□□□□ -1.8
UBP12YJL197W PHO92Q06390 306 aa3.83□□□□□ -1.8
UBP12YJL197W MRI1Q06489 411 aaKnown RBP3.83□□□□□ -1.8
UBP12YJL197W IZH3Q07959 543 aa3.83□□□□□ -1.8
UBP12YJL197W MED2Q12124 431 aa3.83□□□□□ -1.8
UBP12YJL197W YER175W-AQ8TGU4 54 aa3.83□□□□□ -1.8
UBP12YJL197W YMR084WA2P2R3 262 aa3.83□□□□□ -1.8
UBP12YJL197W GRR1P24814 1151 aa3.83□□□□□ -1.8
UBP12YJL197W HXT3P32466 567 aaKnown RBP3.83□□□□□ -1.8
UBP12YJL197W SSE2P32590 693 aaKnown RBP3.83□□□□□ -1.8
UBP12YJL197W MRPL40P36534 297 aa3.83□□□□□ -1.8
UBP12YJL197W AAP1P37898 856 aaKnown RBP3.83□□□□□ -1.8
UBP12YJL197W UIP3P39547 235 aa3.83□□□□□ -1.8
UBP12YJL197W RPN14P53196 417 aa3.83□□□□□ -1.8
UBP12YJL197W RRN5Q02983 363 aa3.83□□□□□ -1.8
UBP12YJL197W FMO1P38866 432 aa3.82□□□□□ -1.8
UBP12YJL197W SMC2P38989 1170 aaKnown RBP3.82□□□□□ -1.8
UBP12YJL197W AFG3P39925 761 aa3.82□□□□□ -1.8
UBP12YJL197W ALG5P40350 334 aa3.82□□□□□ -1.8
UBP12YJL197W AIP1P46680 615 aaKnown RBP3.82□□□□□ -1.8
UBP12YJL197W PPM1Q04081 328 aa3.82□□□□□ -1.8
UBP12YJL197W APC5Q08683 685 aa3.82□□□□□ -1.8
UBP12YJL197W FRE3Q08905 711 aa3.82□□□□□ -1.8
UBP12YJL197W APL5Q08951 932 aaKnown RBP3.82□□□□□ -1.8
UBP12YJL197W DAP2P18962 818 aa3.82□□□□□ -1.8
UBP12YJL197W MRPL7P36519 292 aa3.82□□□□□ -1.8
UBP12YJL197W LNP1P38878 278 aa3.82□□□□□ -1.8
UBP12YJL197W SEC31P38968 1273 aaKnown RBP3.82□□□□□ -1.8
UBP12YJL197W YIL089WP40500 205 aa3.82□□□□□ -1.8
UBP12YJL197W EFM6P53970 246 aa3.82□□□□□ -1.8
UBP12YJL197W EGD1Q02642 157 aaKnown RBP3.82□□□□□ -1.8
UBP12YJL197W ARG7Q04728 441 aa3.82□□□□□ -1.8
UBP12YJL197W RBS1Q05672 457 aaKnown RBP3.82□□□□□ -1.8
UBP12YJL197W CRN1Q06440 651 aa3.82□□□□□ -1.8
UBP12YJL197W VPS17P32913 551 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms