RNA–Protein interactions for RNA: YGR184C

UBR1, Transcript of E3 ubiquitin ligase (N-recognin), yeastyeast

Gene UBR1, Length 5,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBR1YGR184C PUT4P15380 627 aa2.23□□□□□ -2.05
UBR1YGR184C SWI4P25302 1093 aaKnown RBP2.23□□□□□ -2.05
UBR1YGR184C RDS1P25611 832 aa2.23□□□□□ -2.05
UBR1YGR184C SPC110P32380 944 aa2.23□□□□□ -2.05
UBR1YGR184C CBF5P33322 483 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
UBR1YGR184C GCS1P35197 352 aa2.23□□□□□ -2.05
UBR1YGR184C LNP1P38878 278 aa2.23□□□□□ -2.05
UBR1YGR184C FMP10P40098 244 aa2.23□□□□□ -2.05
UBR1YGR184C CLA4P48562 842 aa2.23□□□□□ -2.05
UBR1YGR184C RFX1P48743 811 aa2.23□□□□□ -2.05
UBR1YGR184C DIA3P52290 468 aa2.23□□□□□ -2.05
UBR1YGR184C PRO2P54885 456 aaKnown RBP2.23□□□□□ -2.05
UBR1YGR184C MFM1Q02783 413 aa2.23□□□□□ -2.05
UBR1YGR184C YML037CQ03703 340 aa2.23□□□□□ -2.05
UBR1YGR184C YDR444WQ04093 687 aa2.23□□□□□ -2.05
UBR1YGR184C YSH1Q06224 779 aaPredicted RBP2.23□□□□□ -2.05
UBR1YGR184C ARR3Q06598 404 aa2.23□□□□□ -2.05
UBR1YGR184C PHM7Q12252 991 aa2.23□□□□□ -2.05
UBR1YGR184C CTF3Q12748 733 aa2.23□□□□□ -2.05
UBR1YGR184C MET3P08536 511 aa2.23□□□□□ -2.05
UBR1YGR184C TUB3P09734 445 aaKnown RBP2.23□□□□□ -2.05
UBR1YGR184C RPL1AP0CX43 217 aaKnown RBP2.23□□□□□ -2.05
UBR1YGR184C RPL1BP0CX44 217 aaKnown RBP2.23□□□□□ -2.05
UBR1YGR184C YME2P32843 850 aa2.23□□□□□ -2.05
UBR1YGR184C SUR1P33300 382 aa2.23□□□□□ -2.05
UBR1YGR184C SET3P36124 751 aa2.23□□□□□ -2.05
UBR1YGR184C RPF2P36160 344 aaKnown RBP2.23□□□□□ -2.05
UBR1YGR184C MRPL4P36517 319 aa2.23□□□□□ -2.05
UBR1YGR184C CTK2P46962 323 aa2.23□□□□□ -2.05
UBR1YGR184C SHE4P51534 789 aa2.23□□□□□ -2.05
UBR1YGR184C YGL138CP53122 345 aa2.23□□□□□ -2.05
UBR1YGR184C BNI5P53890 448 aaKnown RBP2.23□□□□□ -2.05
UBR1YGR184C YDR541CQ03049 344 aa2.23□□□□□ -2.05
UBR1YGR184C RNH1Q04740 348 aa2.23□□□□□ -2.05
UBR1YGR184C GFD1Q04839 188 aaKnown RBP2.23□□□□□ -2.05
UBR1YGR184C RXT3Q07458 294 aa2.23□□□□□ -2.05
UBR1YGR184C CBP2P03874 630 aaPredicted RBP2.22□□□□□ -2.05
UBR1YGR184C APE1P14904 514 aa2.22□□□□□ -2.05
UBR1YGR184C EFB1P32471 206 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C TIF5P38431 405 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C CIN4P39110 191 aa2.22□□□□□ -2.05
UBR1YGR184C ALG5P40350 334 aa2.22□□□□□ -2.05
UBR1YGR184C TEX1P53851 422 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C SEG1Q04279 960 aa2.22□□□□□ -2.05
UBR1YGR184C MSC3Q05812 728 aa2.22□□□□□ -2.05
UBR1YGR184C MRI1Q06489 411 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C YFT2Q06676 274 aa2.22□□□□□ -2.05
UBR1YGR184C LEU9Q12166 604 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C HXK2P04807 486 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C CHO2P05374 869 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C HIP1P06775 603 aa2.22□□□□□ -2.05
UBR1YGR184C YML003WP0CF16 290 aa2.22□□□□□ -2.05
UBR1YGR184C CMP2P14747 604 aa2.22□□□□□ -2.05
UBR1YGR184C RPS7AP26786 190 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C COQ2P32378 372 aa2.22□□□□□ -2.05
UBR1YGR184C AIM26P32858 118 aa2.22□□□□□ -2.05
UBR1YGR184C SPT10P35208 640 aa2.22□□□□□ -2.05
UBR1YGR184C SNU114P36048 1008 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C MAL33P38157 468 aa2.22□□□□□ -2.05
UBR1YGR184C YER130CP39959 443 aa2.22□□□□□ -2.05
UBR1YGR184C YEL057CP39983 233 aa2.22□□□□□ -2.05
UBR1YGR184C FTR1P40088 404 aa2.22□□□□□ -2.05
UBR1YGR184C LCB2P40970 561 aa2.22□□□□□ -2.05
UBR1YGR184C ZIM17P42844 174 aa2.22□□□□□ -2.05
UBR1YGR184C AFI1Q99222 893 aa2.22□□□□□ -2.05
UBR1YGR184C YMR084WA2P2R3 262 aa2.22□□□□□ -2.05
UBR1YGR184C SUI3P09064 285 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C CDC23P16522 626 aa2.22□□□□□ -2.05
UBR1YGR184C YFL054CP43549 646 aa2.22□□□□□ -2.05
UBR1YGR184C PET130P47065 347 aa2.22□□□□□ -2.05
UBR1YGR184C YAT1P80235 687 aa2.22□□□□□ -2.05
UBR1YGR184C RPA49Q01080 415 aaPredicted RBP2.22□□□□□ -2.05
UBR1YGR184C ENT4Q07872 247 aa2.22□□□□□ -2.05
UBR1YGR184C CDC45Q08032 650 aa2.22□□□□□ -2.05
UBR1YGR184C DCI1Q08558 271 aa2.22□□□□□ -2.05
UBR1YGR184C CIR2Q08822 631 aa2.22□□□□□ -2.05
UBR1YGR184C SGT2Q12118 346 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C TRM732Q03496 1420 aa2.22□□□□□ -2.05
UBR1YGR184C CDC37P06101 506 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C SAM1P10659 382 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C TAL1P15019 335 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C PHO91P27514 894 aa2.22□□□□□ -2.05
UBR1YGR184C KRE2P27809 442 aa2.22□□□□□ -2.05
UBR1YGR184C SLM4P38247 162 aa2.22□□□□□ -2.05
UBR1YGR184C YJL107CP42947 387 aa2.22□□□□□ -2.05
UBR1YGR184C VTC3Q02725 835 aa2.22□□□□□ -2.05
UBR1YGR184C PPM1Q04081 328 aa2.22□□□□□ -2.05
UBR1YGR184C BUD5P25300 642 aaPredicted RBP2.22□□□□□ -2.05
UBR1YGR184C RPC37P36121 282 aa2.22□□□□□ -2.05
UBR1YGR184C CTP1P38152 299 aa2.22□□□□□ -2.05
UBR1YGR184C YHR112CP38716 378 aa2.22□□□□□ -2.05
UBR1YGR184C ASN2P49090 572 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C YGR054WP53235 642 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C ACS1Q01574 713 aa2.22□□□□□ -2.05
UBR1YGR184C RCR2Q03446 210 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C CRF1Q04930 467 aa2.22□□□□□ -2.05
UBR1YGR184C ADE13Q05911 482 aaKnown RBP2.22□□□□□ -2.05
UBR1YGR184C VPS36Q06696 566 aa2.22□□□□□ -2.05
UBR1YGR184C TMA16Q08687 178 aa2.22□□□□□ -2.05
UBR1YGR184C HMI1Q12039 706 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms