RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W MSH1P25846 959 aa2.65□□□□□ -1.99
NIC96YFR002W FUI1P38196 639 aa2.65□□□□□ -1.99
NIC96YFR002W MET30P39014 640 aa2.65□□□□□ -1.99
NIC96YFR002W ERR3P42222 437 aa2.65□□□□□ -1.99
NIC96YFR002W SKP2P42843 763 aa2.65□□□□□ -1.99
NIC96YFR002W TAN1P53072 289 aaPredicted RBP2.65□□□□□ -1.99
NIC96YFR002W YLR455WQ06188 304 aa2.65□□□□□ -1.99
NIC96YFR002W VAM6Q07468 1049 aa2.65□□□□□ -1.99
NIC96YFR002W GEA1P47102 1408 aaPredicted RBP2.65□□□□□ -1.99
NIC96YFR002W MNN2P38069 597 aa2.65□□□□□ -1.99
NIC96YFR002W YHL041WP38730 149 aa2.65□□□□□ -1.99
NIC96YFR002W VPS25P47142 202 aa2.65□□□□□ -1.99
NIC96YFR002W UBP8P50102 471 aa2.65□□□□□ -1.99
NIC96YFR002W DIG1Q03063 452 aaKnown RBP2.65□□□□□ -1.99
NIC96YFR002W IZH1Q03419 316 aa2.65□□□□□ -1.99
NIC96YFR002W SWF1Q04629 336 aa2.65□□□□□ -1.99
NIC96YFR002W ATP4P05626 244 aa2.64□□□□□ -1.99
NIC96YFR002W SUI3P09064 285 aaKnown RBP2.64□□□□□ -1.99
NIC96YFR002W RGT1P32862 1170 aa2.64□□□□□ -1.99
NIC96YFR002W PCL6P40038 420 aa2.64□□□□□ -1.99
NIC96YFR002W YIL169CP40442 995 aa2.64□□□□□ -1.99
NIC96YFR002W TRS130Q03660 1102 aa2.64□□□□□ -1.99
NIC96YFR002W ARP9Q05123 467 aa2.64□□□□□ -1.99
NIC96YFR002W MRP2P10663 115 aaPredicted RBP2.64□□□□□ -1.99
NIC96YFR002W NCP1P16603 691 aaKnown RBP2.64□□□□□ -1.99
NIC96YFR002W CLB4P24871 460 aa2.64□□□□□ -1.99
NIC96YFR002W GCD7P32502 381 aaPredicted RBP2.64□□□□□ -1.99
NIC96YFR002W VPS24P36095 224 aaKnown RBP2.64□□□□□ -1.99
NIC96YFR002W LEU5P38702 357 aa2.64□□□□□ -1.99
NIC96YFR002W NAB3P38996 802 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
NIC96YFR002W YAT2P40017 923 aa2.64□□□□□ -1.99
NIC96YFR002W RPT2P40327 437 aaKnown RBP2.64□□□□□ -1.99
NIC96YFR002W ASG1P40467 964 aa2.64□□□□□ -1.99
NIC96YFR002W BET4Q00618 327 aa2.64□□□□□ -1.99
NIC96YFR002W SVL3Q03088 825 aaKnown RBP2.64□□□□□ -1.99
NIC96YFR002W YDL121CQ07541 149 aa2.64□□□□□ -1.99
NIC96YFR002W RRP6Q12149 733 aaKnown RBP2.64□□□□□ -1.99
NIC96YFR002W SRP54P20424 541 aaKnown RBP2.63□□□□□ -1.99
NIC96YFR002W ADE17P38009 592 aaKnown RBP2.63□□□□□ -1.99
NIC96YFR002W UBP13P38187 747 aa2.63□□□□□ -1.99
NIC96YFR002W IMH1Q06704 911 aaKnown RBP2.63□□□□□ -1.99
NIC96YFR002W POS5Q06892 414 aa2.63□□□□□ -1.99
NIC96YFR002W SPT7P35177 1332 aa2.63□□□□□ -1.99
NIC96YFR002W RSF2P46974 1380 aa2.63□□□□□ -1.99
NIC96YFR002W CHO1P08456 276 aa2.63□□□□□ -1.99
NIC96YFR002W PWP2P25635 923 aaKnown RBP2.63□□□□□ -1.99
NIC96YFR002W YND1P40009 630 aa2.63□□□□□ -1.99
NIC96YFR002W VPS27P40343 622 aaKnown RBP2.63□□□□□ -1.99
NIC96YFR002W ESBP6P53918 673 aa2.63□□□□□ -1.99
NIC96YFR002W ASI1P54074 624 aa2.63□□□□□ -1.99
NIC96YFR002W CIA1Q05583 330 aa2.63□□□□□ -1.99
NIC96YFR002W SWA2Q06677 668 aa2.63□□□□□ -1.99
NIC96YFR002W SWT1Q12104 458 aa2.63□□□□□ -1.99
NIC96YFR002W SRB8P25648 1427 aa2.62□□□□□ -1.99
NIC96YFR002W STE50P25344 346 aa2.62□□□□□ -1.99
NIC96YFR002W EFM2P38347 419 aa2.62□□□□□ -1.99
NIC96YFR002W NRT1Q08485 598 aa2.62□□□□□ -1.99
NIC96YFR002W APL5Q08951 932 aaKnown RBP2.62□□□□□ -1.99
NIC96YFR002W TRX2P22803 104 aaKnown RBP2.62□□□□□ -1.99
NIC96YFR002W GRS2Q06817 618 aa2.62□□□□□ -1.99
NIC96YFR002W RRP5Q05022 1729 aaKnown RBP2.61□□□□□ -1.99
NIC96YFR002W PET111P08468 800 aa2.61□□□□□ -1.99
NIC96YFR002W DCP2P53550 970 aaKnown RBP2.61□□□□□ -1.99
NIC96YFR002W ARC35P53731 342 aaKnown RBP2.61□□□□□ -1.99
NIC96YFR002W CSL4P53859 292 aaPredicted RBP2.61□□□□□ -1.99
NIC96YFR002W ECI1Q05871 280 aa2.61□□□□□ -1.99
NIC96YFR002W ATP2P00830 511 aaKnown RBP2.61□□□□□ -1.99
NIC96YFR002W APA1P16550 321 aaKnown RBP2.61□□□□□ -1.99
NIC96YFR002W IES5P40060 125 aa2.61□□□□□ -1.99
NIC96YFR002W YIL161WP40449 235 aaKnown RBP2.61□□□□□ -1.99
NIC96YFR002W YLR049CQ12110 428 aa2.61□□□□□ -1.99
NIC96YFR002W PCD1Q12524 340 aa2.61□□□□□ -1.99
NIC96YFR002W CBP1P07252 654 aa2.6□□□□□ -1.99
NIC96YFR002W YEF3P16521 1044 aaKnown RBP2.6□□□□□ -1.99
NIC96YFR002W YCL049CP25577 312 aa2.6□□□□□ -1.99
NIC96YFR002W NYV1Q12255 253 aa2.6□□□□□ -1.99
NIC96YFR002W SPO16P17122 198 aa2.6□□□□□ -1.99
NIC96YFR002W CCT4P39078 528 aaKnown RBP2.6□□□□□ -1.99
NIC96YFR002W SWP82P43554 623 aa2.6□□□□□ -1.99
NIC96YFR002W IML2P47031 731 aa2.6□□□□□ -1.99
NIC96YFR002W HOS2P53096 452 aaPredicted RBP2.6□□□□□ -1.99
NIC96YFR002W PFA5Q03289 374 aa2.6□□□□□ -1.99
NIC96YFR002W YMR254CQ04838 102 aa2.6□□□□□ -1.99
NIC96YFR002W CRN1Q06440 651 aa2.6□□□□□ -1.99
NIC96YFR002W GPN2Q08726 347 aaPredicted RBP2.6□□□□□ -1.99
NIC96YFR002W NTR2P36118 322 aaPredicted RBP2.59□□□□□ -1.99
NIC96YFR002W AAP1P37898 856 aaKnown RBP2.59□□□□□ -1.99
NIC96YFR002W ACA1P39970 489 aa2.59□□□□□ -1.99
NIC96YFR002W FMP42Q04991 504 aa2.59□□□□□ -1.99
NIC96YFR002W YLR281CQ05863 155 aa2.59□□□□□ -1.99
NIC96YFR002W TFC6Q06339 672 aa2.59□□□□□ -1.99
NIC96YFR002W NKP1Q12493 238 aa2.59□□□□□ -1.99
NIC96YFR002W YOR111WQ99210 232 aa2.59□□□□□ -1.99
NIC96YFR002W SNF2P22082 1703 aa2.59□□□□□ -2
NIC96YFR002W TY2A-LR1P0C2J4 438 aa2.59□□□□□ -2
NIC96YFR002W TY2A-FP0CX61 438 aa2.59□□□□□ -2
NIC96YFR002W TY2A-GR2P0CX62 438 aa2.59□□□□□ -2
NIC96YFR002W CDC23P16522 626 aa2.59□□□□□ -2
NIC96YFR002W TKL1P23254 680 aaKnown RBP2.59□□□□□ -2
NIC96YFR002W TY2A-CP25383 438 aa2.59□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms