RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B RPL19BP0CX83 189 aaPredicted RBP0.56□□□□□ -2.32
SBH1YER087C-B PFK2P16862 959 aaKnown RBP RIP-Chip data0.56□□□□□ -2.32not detected
SBH1YER087C-B TRX2P22803 104 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B TKL1P23254 680 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B ERG8P24521 451 aa0.56□□□□□ -2.32
SBH1YER087C-B SWI4P25302 1093 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B STE50P25344 346 aa0.56□□□□□ -2.32
SBH1YER087C-B RPS7AP26786 190 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B CDC15P27636 974 aa0.56□□□□□ -2.32
SBH1YER087C-B MSS51P32335 436 aa0.56□□□□□ -2.32
SBH1YER087C-B SAC1P32368 623 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B PDB1P32473 366 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B SIP1P32578 815 aa0.56□□□□□ -2.32
SBH1YER087C-B MRS6P32864 603 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B SOF1P33750 489 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B LHS1P36016 881 aa0.56□□□□□ -2.32
SBH1YER087C-B ESL2P36168 1195 aa0.56□□□□□ -2.32
SBH1YER087C-B IFA38P38286 347 aa0.56□□□□□ -2.32
SBH1YER087C-B ARP1P38696 384 aa0.56□□□□□ -2.32
SBH1YER087C-B DIA4P38705 446 aaPredicted RBP0.56□□□□□ -2.32
SBH1YER087C-B UME6P39001 836 aa0.56□□□□□ -2.32
SBH1YER087C-B UIP3P39547 235 aa0.56□□□□□ -2.32
SBH1YER087C-B ERV46P39727 415 aa0.56□□□□□ -2.32
SBH1YER087C-B PCL6P40038 420 aa0.56□□□□□ -2.32
SBH1YER087C-B KAP123P40069 1113 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B SLZ1P40167 298 aa0.56□□□□□ -2.32
SBH1YER087C-B RGI2P40188 164 aa0.56□□□□□ -2.32
SBH1YER087C-B YIL161WP40449 235 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B PKP1P40530 394 aa0.56□□□□□ -2.32
SBH1YER087C-B IST3P40565 148 aaPredicted RBP0.56□□□□□ -2.32
SBH1YER087C-B SAP185P40856 1058 aa0.56□□□□□ -2.32
SBH1YER087C-B SMK1P41808 388 aa0.56□□□□□ -2.32
SBH1YER087C-B SWP82P43554 623 aa0.56□□□□□ -2.32
SBH1YER087C-B ARC1P46672 376 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B CTK2P46962 323 aa0.56□□□□□ -2.32
SBH1YER087C-B UBX6P47049 396 aa0.56□□□□□ -2.32
SBH1YER087C-B BNA1P47096 177 aa0.56□□□□□ -2.32
SBH1YER087C-B SGM1P47166 707 aa0.56□□□□□ -2.32
SBH1YER087C-B AAD10P47182 288 aa0.56□□□□□ -2.32
SBH1YER087C-B UBP8P50102 471 aa0.56□□□□□ -2.32
SBH1YER087C-B CUL3P53202 744 aa0.56□□□□□ -2.32
SBH1YER087C-B PIL1P53252 339 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B RBG2P53295 368 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B YPR003CP53394 754 aa0.56□□□□□ -2.32
SBH1YER087C-B ARC35P53731 342 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B YNR061CP53747 219 aa0.56□□□□□ -2.32
SBH1YER087C-B ASI1P54074 624 aa0.56□□□□□ -2.32
SBH1YER087C-B ADE16P54113 591 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B MAK10Q02197 733 aa0.56□□□□□ -2.32
SBH1YER087C-B YML119WQ03208 357 aa0.56□□□□□ -2.32
SBH1YER087C-B YMR178WQ03219 274 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B RSM28Q03430 361 aa0.56□□□□□ -2.32
SBH1YER087C-B YKU80Q04437 629 aa0.56□□□□□ -2.32
SBH1YER087C-B CRF1Q04930 467 aa0.56□□□□□ -2.32
SBH1YER087C-B YML053CQ04978 212 aa0.56□□□□□ -2.32
SBH1YER087C-B ECI1Q05871 280 aa0.56□□□□□ -2.32
SBH1YER087C-B BLS1Q06071 122 aa0.56□□□□□ -2.32
SBH1YER087C-B SWA2Q06677 668 aa0.56□□□□□ -2.32
SBH1YER087C-B CSR1Q06705 408 aaKnown RBP0.56□□□□□ -2.32
SBH1YER087C-B MCH4Q08268 501 aa0.56□□□□□ -2.32
SBH1YER087C-B TMA16Q08687 178 aa0.56□□□□□ -2.32
SBH1YER087C-B FRE3Q08905 711 aa0.56□□□□□ -2.32
SBH1YER087C-B YPL272CQ08984 517 aa0.56□□□□□ -2.32
SBH1YER087C-B TRM8Q12009 286 aa0.56□□□□□ -2.32
SBH1YER087C-B NUS1Q12063 375 aa0.56□□□□□ -2.32
SBH1YER087C-B NMD4Q12129 218 aa0.56□□□□□ -2.32
SBH1YER087C-B TAH18Q12181 623 aa0.56□□□□□ -2.32
SBH1YER087C-B COX17Q12287 69 aa0.56□□□□□ -2.32
SBH1YER087C-B YDL012CQ12489 107 aa0.56□□□□□ -2.32
SBH1YER087C-B SSM4P40318 1319 aa0.56□□□□□ -2.32
SBH1YER087C-B RTC1Q08281 1341 aa0.56□□□□□ -2.32
SBH1YER087C-B YBR085C-AO43137 85 aa0.55□□□□□ -2.32
SBH1YER087C-B SEM1O94742 89 aa0.55□□□□□ -2.32
SBH1YER087C-B TPK1P06244 397 aa0.55□□□□□ -2.32
SBH1YER087C-B PET111P08468 800 aa0.55□□□□□ -2.32
SBH1YER087C-B TY2A-LR1P0C2J4 438 aa0.55□□□□□ -2.32
SBH1YER087C-B TY2A-FP0CX61 438 aa0.55□□□□□ -2.32
SBH1YER087C-B TY2A-GR2P0CX62 438 aa0.55□□□□□ -2.32
SBH1YER087C-B CDC24P11433 854 aaPredicted RBP0.55□□□□□ -2.32
SBH1YER087C-B PMS1P14242 873 aa0.55□□□□□ -2.32
SBH1YER087C-B HSC82P15108 705 aaKnown RBP0.55□□□□□ -2.32
SBH1YER087C-B GUK1P15454 187 aaKnown RBP0.55□□□□□ -2.32
SBH1YER087C-B YEF3P16521 1044 aaKnown RBP0.55□□□□□ -2.32
SBH1YER087C-B APA1P16550 321 aaKnown RBP0.55□□□□□ -2.32
SBH1YER087C-B SPE2P21182 396 aa0.55□□□□□ -2.32
SBH1YER087C-B PWP1P21304 576 aaKnown RBP0.55□□□□□ -2.32
SBH1YER087C-B CLB2P24869 491 aa0.55□□□□□ -2.32
SBH1YER087C-B BUD5P25300 642 aaPredicted RBP0.55□□□□□ -2.32
SBH1YER087C-B YCR006CP25350 157 aa0.55□□□□□ -2.32
SBH1YER087C-B ADH7P25377 361 aa0.55□□□□□ -2.32
SBH1YER087C-B TY2A-CP25383 438 aa0.55□□□□□ -2.32
SBH1YER087C-B GID7P25569 745 aa0.55□□□□□ -2.32
SBH1YER087C-B RFA2P26754 273 aaKnown RBP0.55□□□□□ -2.32
SBH1YER087C-B RAD16P31244 790 aa0.55□□□□□ -2.32
SBH1YER087C-B SSH4P32343 579 aa0.55□□□□□ -2.32
SBH1YER087C-B IMP2'P32351 346 aa0.55□□□□□ -2.32
SBH1YER087C-B RPN2P32565 945 aaKnown RBP0.55□□□□□ -2.32
SBH1YER087C-B SSE2P32590 693 aaKnown RBP0.55□□□□□ -2.32
SBH1YER087C-B CNS1P33313 385 aa0.55□□□□□ -2.32
SBH1YER087C-B SLC1P33333 303 aa0.55□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms