RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W MAK10Q02197 733 aa3.96□□□□□ -1.78
RPN9YDR427W PFA5Q03289 374 aa3.96□□□□□ -1.78
RPN9YDR427W SNO4Q04902 237 aa3.96□□□□□ -1.78
RPN9YDR427W YTH1Q06102 208 aaPredicted RBP3.96□□□□□ -1.78
RPN9YDR427W SSP2Q08646 371 aa3.96□□□□□ -1.78
RPN9YDR427W HSP33Q08914 237 aaKnown RBP3.96□□□□□ -1.78
RPN9YDR427W HSP32Q08992 237 aa3.96□□□□□ -1.78
RPN9YDR427W YLR112WQ12130 139 aa3.96□□□□□ -1.78
RPN9YDR427W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
RPN9YDR427W DPB3P27344 201 aa3.95□□□□□ -1.78
RPN9YDR427W CDC15P27636 974 aa3.95□□□□□ -1.78
RPN9YDR427W PCL6P40038 420 aa3.95□□□□□ -1.78
RPN9YDR427W SEC24P40482 926 aaKnown RBP3.95□□□□□ -1.78
RPN9YDR427W IME4P41833 600 aa3.95□□□□□ -1.78
RPN9YDR427W SIP4P46954 829 aa3.95□□□□□ -1.78
RPN9YDR427W VPS25P47142 202 aa3.95□□□□□ -1.78
RPN9YDR427W IST1P53843 298 aaPredicted RBP3.95□□□□□ -1.78
RPN9YDR427W INN1P53901 409 aa3.95□□□□□ -1.78
RPN9YDR427W BOP3P53958 396 aa3.95□□□□□ -1.78
RPN9YDR427W INA17Q02888 182 aa3.95□□□□□ -1.78
RPN9YDR427W MUB1Q03162 620 aa3.95□□□□□ -1.78
RPN9YDR427W FCP1Q03254 732 aa3.95□□□□□ -1.78
RPN9YDR427W ARP9Q05123 467 aa3.95□□□□□ -1.78
RPN9YDR427W ECI1Q05871 280 aa3.95□□□□□ -1.78
RPN9YDR427W MLH2Q07980 695 aa3.95□□□□□ -1.78
RPN9YDR427W ATG9Q12142 997 aa3.95□□□□□ -1.78
RPN9YDR427W SLZ1P40167 298 aa3.94□□□□□ -1.78
RPN9YDR427W PKP1P40530 394 aa3.94□□□□□ -1.78
RPN9YDR427W YFR020WP43600 232 aa3.94□□□□□ -1.78
RPN9YDR427W GRS2Q06817 618 aa3.94□□□□□ -1.78
RPN9YDR427W YBR085C-AO43137 85 aa3.93□□□□□ -1.78
RPN9YDR427W PHO2P07269 559 aa3.93□□□□□ -1.78
RPN9YDR427W RPL42AP0CX27 106 aaKnown RBP3.93□□□□□ -1.78
RPN9YDR427W RPL42BP0CX28 106 aaKnown RBP3.93□□□□□ -1.78
RPN9YDR427W RAP1P11938 827 aa3.93□□□□□ -1.78
RPN9YDR427W ESL2P36168 1195 aa3.93□□□□□ -1.78
RPN9YDR427W HXT9P40885 567 aa3.93□□□□□ -1.78
RPN9YDR427W AAD10P47182 288 aa3.93□□□□□ -1.78
RPN9YDR427W YTP1P53584 459 aa3.93□□□□□ -1.78
RPN9YDR427W ARP10Q04549 284 aa3.93□□□□□ -1.78
RPN9YDR427W DSE3Q08729 430 aa3.93□□□□□ -1.78
RPN9YDR427W FUM1P08417 488 aaKnown RBP3.92□□□□□ -1.78
RPN9YDR427W KRS1P15180 591 aaKnown RBP3.92□□□□□ -1.78
RPN9YDR427W YCR043CP25361 127 aa3.92□□□□□ -1.78
RPN9YDR427W RER1P25560 188 aa3.92□□□□□ -1.78
RPN9YDR427W ALY1P36117 915 aa3.92□□□□□ -1.78
RPN9YDR427W MNN2P38069 597 aa3.92□□□□□ -1.78
RPN9YDR427W ARC40P38328 384 aaKnown RBP3.92□□□□□ -1.78
RPN9YDR427W ARP1P38696 384 aa3.92□□□□□ -1.78
RPN9YDR427W YNG2P38806 282 aaKnown RBP3.92□□□□□ -1.78
RPN9YDR427W TES1P41903 349 aaKnown RBP3.92□□□□□ -1.78
RPN9YDR427W SMC3P47037 1230 aa3.92□□□□□ -1.78
RPN9YDR427W CBK1P53894 756 aa3.92□□□□□ -1.78
RPN9YDR427W IZH1Q03419 316 aa3.92□□□□□ -1.78
RPN9YDR427W OPY2Q06810 360 aa3.92□□□□□ -1.78
RPN9YDR427W YOL159CQ08300 171 aa3.92□□□□□ -1.78
RPN9YDR427W HXK2P04807 486 aaKnown RBP3.91□□□□□ -1.78
RPN9YDR427W GAC1P28006 793 aa3.91□□□□□ -1.78
RPN9YDR427W SNU114P36048 1008 aaKnown RBP3.91□□□□□ -1.78
RPN9YDR427W UIP3P39547 235 aa3.91□□□□□ -1.78
RPN9YDR427W YJR061WP40355 935 aa3.91□□□□□ -1.78
RPN9YDR427W DPH1P40487 425 aaKnown RBP3.91□□□□□ -1.78
RPN9YDR427W DPB11P47027 764 aaPredicted RBP3.91□□□□□ -1.78
RPN9YDR427W YMR178WQ03219 274 aaKnown RBP3.91□□□□□ -1.78
RPN9YDR427W YMR034CQ05131 434 aaPredicted RBP3.91□□□□□ -1.78
RPN9YDR427W UTP21Q06078 939 aaPredicted RBP3.91□□□□□ -1.78
RPN9YDR427W MCP2Q06567 569 aa3.91□□□□□ -1.78
RPN9YDR427W NBP2Q12163 236 aa3.91□□□□□ -1.78
RPN9YDR427W CBP1P07252 654 aa3.9□□□□□ -1.79
RPN9YDR427W PDB1P32473 366 aaKnown RBP3.9□□□□□ -1.79
RPN9YDR427W DIA4P38705 446 aaPredicted RBP3.9□□□□□ -1.79
RPN9YDR427W ARC1P46672 376 aaKnown RBP3.9□□□□□ -1.79
RPN9YDR427W MEP3P53390 489 aa3.9□□□□□ -1.79
RPN9YDR427W ESBP6P53918 673 aa3.9□□□□□ -1.79
RPN9YDR427W ZDS2P54786 942 aa3.9□□□□□ -1.79
RPN9YDR427W SKG3Q06315 1026 aa3.9□□□□□ -1.79
RPN9YDR427W SSH4P32343 579 aa3.89□□□□□ -1.79
RPN9YDR427W MIA40P36046 403 aa3.89□□□□□ -1.79
RPN9YDR427W RFC1P38630 861 aaKnown RBP3.89□□□□□ -1.79
RPN9YDR427W RTT107P38850 1070 aa3.89□□□□□ -1.79
RPN9YDR427W YGL260WP53056 76 aa3.89□□□□□ -1.79
RPN9YDR427W SGF73P53165 657 aa3.89□□□□□ -1.79
RPN9YDR427W YKU80Q04437 629 aa3.89□□□□□ -1.79
RPN9YDR427W YMR254CQ04838 102 aa3.89□□□□□ -1.79
RPN9YDR427W RIX7Q07844 837 aaKnown RBP3.89□□□□□ -1.79
RPN9YDR427W INP53Q12271 1107 aa3.89□□□□□ -1.79
RPN9YDR427W NKP1Q12493 238 aa3.89□□□□□ -1.79
RPN9YDR427W PWP1P21304 576 aaKnown RBP3.88□□□□□ -1.79
RPN9YDR427W YKL050CP35736 922 aa3.88□□□□□ -1.79
RPN9YDR427W YPK3P38070 525 aa3.88□□□□□ -1.79
RPN9YDR427W EFM2P38347 419 aa3.88□□□□□ -1.79
RPN9YDR427W MET30P39014 640 aa3.88□□□□□ -1.79
RPN9YDR427W PHO90P39535 881 aa3.88□□□□□ -1.79
RPN9YDR427W NNF2P53253 936 aa3.88□□□□□ -1.79
RPN9YDR427W YNL181WP53878 407 aa3.88□□□□□ -1.79
RPN9YDR427W BET4Q00618 327 aa3.88□□□□□ -1.79
RPN9YDR427W CTL1Q03220 320 aaKnown RBP3.88□□□□□ -1.79
RPN9YDR427W APL5Q08951 932 aaKnown RBP3.88□□□□□ -1.79
RPN9YDR427W RPL19AP0CX82 189 aaKnown RBP3.87□□□□□ -1.79
RPN9YDR427W RPL19BP0CX83 189 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms