RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C BAR1P12630 587 aa4.51□□□□□ -1.69
RTG3YBL103C CLB2P24869 491 aa4.51□□□□□ -1.69
RTG3YBL103C TFC3P34111 1160 aa4.51□□□□□ -1.69
RTG3YBL103C STV1P37296 890 aa4.51□□□□□ -1.69
RTG3YBL103C BSC1Q12140 328 aa4.51□□□□□ -1.69
RTG3YBL103C RPB8P20436 146 aa4.5□□□□□ -1.69
RTG3YBL103C UBC1P21734 215 aaKnown RBP4.5□□□□□ -1.69
RTG3YBL103C CUL3P53202 744 aa4.5□□□□□ -1.69
RTG3YBL103C UBX4P54730 416 aa4.5□□□□□ -1.69
RTG3YBL103C YDR415CQ04033 374 aaPredicted RBP4.5□□□□□ -1.69
RTG3YBL103C BLS1Q06071 122 aa4.5□□□□□ -1.69
RTG3YBL103C MTF2P10849 440 aa4.49□□□□□ -1.69
RTG3YBL103C PFK26P40433 827 aaKnown RBP4.49□□□□□ -1.69
RTG3YBL103C RTS2P40962 232 aa4.49□□□□□ -1.69
RTG3YBL103C YLR352WQ06479 807 aa4.49□□□□□ -1.69
RTG3YBL103C KRS1P15180 591 aaKnown RBP4.49□□□□□ -1.69
RTG3YBL103C RPN2P32565 945 aaKnown RBP4.49□□□□□ -1.69
RTG3YBL103C ESL2P36168 1195 aa4.49□□□□□ -1.69
RTG3YBL103C IST3P40565 148 aaPredicted RBP4.49□□□□□ -1.69
RTG3YBL103C IAH1P41734 238 aa4.49□□□□□ -1.69
RTG3YBL103C RSF1Q05043 376 aa4.49□□□□□ -1.69
RTG3YBL103C RTT103Q05543 409 aa4.49□□□□□ -1.69
RTG3YBL103C YDL218WQ07629 317 aa4.49□□□□□ -1.69
RTG3YBL103C YOL159CQ08300 171 aa4.49□□□□□ -1.69
RTG3YBL103C ERG27Q12452 347 aaKnown RBP4.49□□□□□ -1.69
RTG3YBL103C PGI1P12709 554 aaKnown RBP4.48□□□□□ -1.69
RTG3YBL103C RAD16P31244 790 aa4.48□□□□□ -1.69
RTG3YBL103C TRS65P32893 560 aa4.48□□□□□ -1.69
RTG3YBL103C YIL060WP40519 144 aa4.48□□□□□ -1.69
RTG3YBL103C FET5P43561 622 aa4.48□□□□□ -1.69
RTG3YBL103C RPN11P43588 306 aaKnown RBP4.48□□□□□ -1.69
RTG3YBL103C YNR061CP53747 219 aa4.48□□□□□ -1.69
RTG3YBL103C REG1Q00816 1014 aa4.48□□□□□ -1.69
RTG3YBL103C SCW10Q04951 389 aa4.48□□□□□ -1.69
RTG3YBL103C TFC6Q06339 672 aa4.48□□□□□ -1.69
RTG3YBL103C CSR1Q06705 408 aaKnown RBP4.48□□□□□ -1.69
RTG3YBL103C ERG8P24521 451 aa4.47□□□□□ -1.69
RTG3YBL103C YJL070CP40361 888 aa4.47□□□□□ -1.69
RTG3YBL103C SMK1P41808 388 aa4.47□□□□□ -1.69
RTG3YBL103C RRT6P53117 311 aaPredicted RBP4.47□□□□□ -1.69
RTG3YBL103C NNF2P53253 936 aa4.47□□□□□ -1.69
RTG3YBL103C YOR019WQ99248 730 aa4.47□□□□□ -1.69
RTG3YBL103C VCX1Q99385 411 aa4.47□□□□□ -1.69
RTG3YBL103C DBF20P32328 564 aa4.46□□□□□ -1.7
RTG3YBL103C PSD1P39006 500 aa4.46□□□□□ -1.7
RTG3YBL103C CRZ1P53968 678 aa4.46□□□□□ -1.7
RTG3YBL103C CSR2Q12734 1121 aa4.46□□□□□ -1.7
RTG3YBL103C RIM2P38127 377 aa4.45□□□□□ -1.7
RTG3YBL103C AZF1P41696 914 aa4.45□□□□□ -1.7
RTG3YBL103C CTF18P49956 741 aa4.45□□□□□ -1.7
RTG3YBL103C YML002WP0CF17 737 aa4.44□□□□□ -1.7
RTG3YBL103C GID7P25569 745 aa4.44□□□□□ -1.7
RTG3YBL103C CDC15P27636 974 aa4.44□□□□□ -1.7
RTG3YBL103C YIR014WP40570 242 aa4.44□□□□□ -1.7
RTG3YBL103C IST1P53843 298 aaPredicted RBP4.44□□□□□ -1.7
RTG3YBL103C NUP100Q02629 959 aa4.44□□□□□ -1.7
RTG3YBL103C HXK2P04807 486 aaKnown RBP4.43□□□□□ -1.7
RTG3YBL103C GLN3P18494 730 aa4.43□□□□□ -1.7
RTG3YBL103C PKP2P53170 491 aa4.43□□□□□ -1.7
RTG3YBL103C DAP1Q12091 152 aa4.43□□□□□ -1.7
RTG3YBL103C ATG9Q12142 997 aa4.43□□□□□ -1.7
RTG3YBL103C PMS1P14242 873 aa4.43□□□□□ -1.7
RTG3YBL103C PFK2P16862 959 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
RTG3YBL103C MIA40P36046 403 aa4.43□□□□□ -1.7
RTG3YBL103C YMR178WQ03219 274 aaKnown RBP4.43□□□□□ -1.7
RTG3YBL103C PSK2Q08217 1101 aa4.43□□□□□ -1.7
RTG3YBL103C PDA1P16387 420 aaKnown RBP4.42□□□□□ -1.7
RTG3YBL103C GAC1P28006 793 aa4.42□□□□□ -1.7
RTG3YBL103C XRS2P33301 854 aa4.42□□□□□ -1.7
RTG3YBL103C TEF4P36008 412 aaKnown RBP4.42□□□□□ -1.7
RTG3YBL103C ERG7P38604 731 aa4.42□□□□□ -1.7
RTG3YBL103C PHO90P39535 881 aa4.42□□□□□ -1.7
RTG3YBL103C SEC24P40482 926 aaKnown RBP4.42□□□□□ -1.7
RTG3YBL103C PKP1P40530 394 aa4.42□□□□□ -1.7
RTG3YBL103C IME4P41833 600 aa4.42□□□□□ -1.7
RTG3YBL103C TRM8Q12009 286 aa4.42□□□□□ -1.7
RTG3YBL103C YLR302CO13544 120 aa4.41□□□□□ -1.7
RTG3YBL103C ARP1P38696 384 aa4.41□□□□□ -1.7
RTG3YBL103C BNA1P47096 177 aa4.41□□□□□ -1.7
RTG3YBL103C ADE13Q05911 482 aaKnown RBP4.41□□□□□ -1.7
RTG3YBL103C ATG26Q06321 1198 aa4.41□□□□□ -1.7
RTG3YBL103C UME6P39001 836 aa4.4□□□□□ -1.71
RTG3YBL103C RGI2P40188 164 aa4.4□□□□□ -1.71
RTG3YBL103C DPB11P47027 764 aaPredicted RBP4.4□□□□□ -1.71
RTG3YBL103C VPS4P52917 437 aa4.4□□□□□ -1.71
RTG3YBL103C SNF1P06782 633 aaKnown RBP4.39□□□□□ -1.71
RTG3YBL103C LCB1P25045 558 aaKnown RBP4.39□□□□□ -1.71
RTG3YBL103C CNS1P33313 385 aa4.39□□□□□ -1.71
RTG3YBL103C DHH1P39517 506 aaKnown RBP4.39□□□□□ -1.71
RTG3YBL103C RIC1P40395 1056 aa4.39□□□□□ -1.71
RTG3YBL103C RDR1Q08904 546 aa4.39□□□□□ -1.71
RTG3YBL103C NUS1Q12063 375 aa4.39□□□□□ -1.71
RTG3YBL103C YBR085C-AO43137 85 aa4.38□□□□□ -1.71
RTG3YBL103C PGS1P25578 521 aa4.38□□□□□ -1.71
RTG3YBL103C ANS1P38832 159 aa4.38□□□□□ -1.71
RTG3YBL103C SMC3P47037 1230 aa4.38□□□□□ -1.71
RTG3YBL103C STR3P53101 465 aaKnown RBP4.38□□□□□ -1.71
RTG3YBL103C TMA64Q04600 565 aaKnown RBP4.38□□□□□ -1.71
RTG3YBL103C APL4Q12028 832 aa4.38□□□□□ -1.71
RTG3YBL103C INP53Q12271 1107 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms