RNA–Protein interactions for RNA: YAR008W

SEN34, Transcript of Subunit of the tRNA splicing endonuclease, yeast

Gene SEN34, Length 828 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEN34	YAR008W	ERV41	Q04651	352 aa		5.9	□□□□□ -1.46
SEN34	YAR008W	NEW1	Q08972	1196 aa	Known RBP	5.9	□□□□□ -1.46
SEN34	YAR008W	SMF3	Q12078	473 aa	Predicted RBP	5.9	□□□□□ -1.46
SEN34	YAR008W	RPP2B	P02400	110 aa	Known RBP	5.89	□□□□□ -1.47
SEN34	YAR008W	CYT1	P07143	309 aa		5.89	□□□□□ -1.47
SEN34	YAR008W	RPS6A	P0CX37	236 aa	Known RBP	5.89	□□□□□ -1.47
SEN34	YAR008W	RPS6B	P0CX38	236 aa	Predicted RBP	5.89	□□□□□ -1.47
SEN34	YAR008W	TUP1	P16649	713 aa		5.89	□□□□□ -1.47
SEN34	YAR008W	SFL1	P20134	766 aa		5.89	□□□□□ -1.47
SEN34	YAR008W	SEC62	P21825	274 aa		5.89	□□□□□ -1.47
SEN34	YAR008W	YCL042W	P25572	119 aa		5.89	□□□□□ -1.47
SEN34	YAR008W	MSH1	P25846	959 aa		5.89	□□□□□ -1.47
SEN34	YAR008W	RPS0A	P32905	252 aa	Known RBP	5.89	□□□□□ -1.47
SEN34	YAR008W	YHR182W	P38870	785 aa		5.89	□□□□□ -1.47
SEN34	YAR008W	ELO3	P40319	345 aa		5.89	□□□□□ -1.47
SEN34	YAR008W	HYR1	P40581	163 aa	Known RBP	5.89	□□□□□ -1.47
SEN34	YAR008W	RFX1	P48743	811 aa		5.89	□□□□□ -1.47
SEN34	YAR008W	IVY1	Q04934	453 aa		5.89	□□□□□ -1.47
SEN34	YAR008W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.89	□□□□□ -1.47	not detected
SEN34	YAR008W	APC11	Q12157	165 aa		5.89	□□□□□ -1.47
SEN34	YAR008W	FRT1	Q99332	602 aa		5.89	□□□□□ -1.47
SEN34	YAR008W	AI5_ALPHA	Q9ZZX1	630 aa		5.89	□□□□□ -1.47
SEN34	YAR008W	RPL7A	P05737	244 aa	Known RBP	5.88	□□□□□ -1.47
SEN34	YAR008W	STE6	P12866	1290 aa		5.88	□□□□□ -1.47
SEN34	YAR008W	PHO84	P25297	587 aa	Known RBP	5.88	□□□□□ -1.47
SEN34	YAR008W	IMG1	P25626	169 aa		5.88	□□□□□ -1.47
SEN34	YAR008W	MEI4	P29467	408 aa		5.88	□□□□□ -1.47
SEN34	YAR008W	PHO11	P35842	467 aa		5.88	□□□□□ -1.47
SEN34	YAR008W	MRPL37	P36532	105 aa		5.88	□□□□□ -1.47
SEN34	YAR008W	YHR033W	P38690	423 aa		5.88	□□□□□ -1.47
SEN34	YAR008W	PHO12	P38693	467 aa		5.88	□□□□□ -1.47
SEN34	YAR008W	DBP8	P38719	431 aa		5.88	□□□□□ -1.47
SEN34	YAR008W	TRM9	P49957	279 aa		5.88	□□□□□ -1.47
SEN34	YAR008W	YNL092W	P53934	400 aa		5.88	□□□□□ -1.47
SEN34	YAR008W	ADE12	P80210	433 aa	Known RBP	5.88	□□□□□ -1.47
SEN34	YAR008W	RHO3	Q00245	231 aa	Known RBP	5.88	□□□□□ -1.47
SEN34	YAR008W	SRP1	Q02821	542 aa	Known RBP	5.88	□□□□□ -1.47
SEN34	YAR008W	RRN11	Q04712	507 aa		5.88	□□□□□ -1.47
SEN34	YAR008W	RRP45	Q05636	305 aa	Known RBP	5.88	□□□□□ -1.47
SEN34	YAR008W	MCA1	Q08601	432 aa		5.88	□□□□□ -1.47
SEN34	YAR008W	TMA16	Q08687	178 aa		5.88	□□□□□ -1.47
SEN34	YAR008W	BUD7	Q08754	746 aa		5.88	□□□□□ -1.47
SEN34	YAR008W	RPL7B	Q12213	244 aa	Known RBP	5.88	□□□□□ -1.47
SEN34	YAR008W	MCM16	Q12262	181 aa		5.88	□□□□□ -1.47
SEN34	YAR008W	HSP42	Q12329	375 aa		5.88	□□□□□ -1.47
SEN34	YAR008W	SEC23	P15303	768 aa	Known RBP	5.87	□□□□□ -1.47
SEN34	YAR008W	URA4	P20051	364 aa		5.87	□□□□□ -1.47
SEN34	YAR008W	CLN1	P20437	546 aa		5.87	□□□□□ -1.47
SEN34	YAR008W	YSP3	P25036	478 aa		5.87	□□□□□ -1.47
SEN34	YAR008W	SEC65	P29478	273 aa		5.87	□□□□□ -1.47
SEN34	YAR008W	NIP1	P32497	812 aa	Known RBP	5.87	□□□□□ -1.47
SEN34	YAR008W	PET112	P33893	541 aa		5.87	□□□□□ -1.47
SEN34	YAR008W	MIA40	P36046	403 aa		5.87	□□□□□ -1.47
SEN34	YAR008W	KAE1	P36132	386 aa		5.87	□□□□□ -1.47
SEN34	YAR008W	YHR210C	P38893	341 aa		5.87	□□□□□ -1.47
SEN34	YAR008W	RGI2	P40188	164 aa		5.87	□□□□□ -1.47
SEN34	YAR008W	YJL107C	P42947	387 aa		5.87	□□□□□ -1.47
SEN34	YAR008W	NOG2	P53742	486 aa	Known RBP	5.87	□□□□□ -1.47
SEN34	YAR008W	ISU1	Q03020	165 aa		5.87	□□□□□ -1.47
SEN34	YAR008W	CCE1	Q03702	353 aa		5.87	□□□□□ -1.47
SEN34	YAR008W	DIN7	Q12086	430 aa		5.87	□□□□□ -1.47
SEN34	YAR008W	NHA1	Q99271	985 aa		5.87	□□□□□ -1.47
SEN34	YAR008W	SEM1	O94742	89 aa		5.86	□□□□□ -1.47
SEN34	YAR008W	GFA1	P14742	717 aa	Known RBP	5.86	□□□□□ -1.47
SEN34	YAR008W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.86	□□□□□ -1.47	not detected
SEN34	YAR008W	PRI2	P20457	528 aa		5.86	□□□□□ -1.47
SEN34	YAR008W	GDA1	P32621	518 aa		5.86	□□□□□ -1.47
SEN34	YAR008W	CTF13	P35203	478 aa		5.86	□□□□□ -1.47
SEN34	YAR008W	PSY4	P38193	441 aa		5.86	□□□□□ -1.47
SEN34	YAR008W	TRM7	P38238	310 aa	Known RBP	5.86	□□□□□ -1.47
SEN34	YAR008W	SMC2	P38989	1170 aa	Known RBP	5.86	□□□□□ -1.47
SEN34	YAR008W	YEL073C	P39974	107 aa		5.86	□□□□□ -1.47
SEN34	YAR008W	ALA1	P40825	983 aa	Known RBP	5.86	□□□□□ -1.47
SEN34	YAR008W	NNF2	P53253	936 aa		5.86	□□□□□ -1.47
SEN34	YAR008W	SIW14	P53965	281 aa		5.86	□□□□□ -1.47
SEN34	YAR008W	UME1	Q03010	460 aa		5.86	□□□□□ -1.47
SEN34	YAR008W	YDR132C	Q03900	495 aa		5.86	□□□□□ -1.47
SEN34	YAR008W	YLR287C	Q05881	355 aa		5.86	□□□□□ -1.47
SEN34	YAR008W	MCD1	Q12158	566 aa		5.86	□□□□□ -1.47
SEN34	YAR008W	MDM35	O60200	86 aa		5.85	□□□□□ -1.47
SEN34	YAR008W	VPS34	P22543	875 aa		5.85	□□□□□ -1.47
SEN34	YAR008W	VAN1	P23642	535 aa		5.85	□□□□□ -1.47
SEN34	YAR008W	YCR015C	P25616	317 aa		5.85	□□□□□ -1.47
SEN34	YAR008W	CPR3	P25719	182 aa		5.85	□□□□□ -1.47
SEN34	YAR008W	DBF4	P32325	704 aa		5.85	□□□□□ -1.47
SEN34	YAR008W	PRP18	P33411	251 aa	Predicted RBP	5.85	□□□□□ -1.47
SEN34	YAR008W	MRPL15	P36523	253 aa		5.85	□□□□□ -1.47
SEN34	YAR008W	SHM1	P37292	490 aa	Predicted RBP	5.85	□□□□□ -1.47
SEN34	YAR008W	FTH1	P38310	465 aa		5.85	□□□□□ -1.47
SEN34	YAR008W	DLD3	P39976	496 aa	Known RBP	5.85	□□□□□ -1.47
SEN34	YAR008W	ZRG17	P53735	605 aa		5.85	□□□□□ -1.47
SEN34	YAR008W	ESF2	P53743	316 aa	Known RBP	5.85	□□□□□ -1.47
SEN34	YAR008W	EFM6	P53970	246 aa		5.85	□□□□□ -1.47
SEN34	YAR008W	ROT1	Q03691	256 aa		5.85	□□□□□ -1.47
SEN34	YAR008W	YLR001C	Q07895	862 aa		5.85	□□□□□ -1.47
SEN34	YAR008W	CMR1	Q12510	522 aa	Known RBP	5.85	□□□□□ -1.47
SEN34	YAR008W	CYR1	P08678	2026 aa	Known RBP	5.85	□□□□□ -1.47
SEN34	YAR008W	PCT1	P13259	424 aa		5.84	□□□□□ -1.47
SEN34	YAR008W	YSR3	P23501	404 aa		5.84	□□□□□ -1.47
SEN34	YAR008W	HEM12	P32347	362 aa	Predicted RBP	5.84	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 1137.2 ms