RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W DID4P36108 232 aa1.8□□□□□ -2.12
CTF4YPR135W APT2P36973 181 aa1.8□□□□□ -2.12
CTF4YPR135W APE4P38821 490 aa1.8□□□□□ -2.12
CTF4YPR135W DUN1P39009 513 aa1.8□□□□□ -2.12
CTF4YPR135W PZF1P39933 429 aa1.8□□□□□ -2.12
CTF4YPR135W TPA1P40032 644 aaKnown RBP1.8□□□□□ -2.12
CTF4YPR135W NDC80P40460 691 aa1.8□□□□□ -2.12
CTF4YPR135W VID28P40547 921 aa1.8□□□□□ -2.12
CTF4YPR135W VTC2P43585 828 aa1.8□□□□□ -2.12
CTF4YPR135W YGR153WP48238 217 aa1.8□□□□□ -2.12
CTF4YPR135W UBC9P50623 157 aaPredicted RBP1.8□□□□□ -2.12
CTF4YPR135W MDR1P53258 950 aa1.8□□□□□ -2.12
CTF4YPR135W CNM67P53865 581 aaKnown RBP1.8□□□□□ -2.12
CTF4YPR135W IMP4P53941 290 aaKnown RBP1.8□□□□□ -2.12
CTF4YPR135W TIM10P87108 93 aa1.8□□□□□ -2.12
CTF4YPR135W RTK1Q12100 620 aaPredicted RBP1.8□□□□□ -2.12
CTF4YPR135W HAL9Q12180 1030 aa1.8□□□□□ -2.12
CTF4YPR135W YOR022CQ12204 715 aa1.8□□□□□ -2.12
CTF4YPR135W YLR415CO13578 112 aa1.79□□□□□ -2.12
CTF4YPR135W DAL7P21826 554 aa1.79□□□□□ -2.12
CTF4YPR135W CYS3P31373 394 aaKnown RBP1.79□□□□□ -2.12
CTF4YPR135W RRN3P36070 627 aa1.79□□□□□ -2.12
CTF4YPR135W NOP4P37838 685 aaKnown RBP1.79□□□□□ -2.12
CTF4YPR135W SPC72P39723 622 aa1.79□□□□□ -2.12
CTF4YPR135W DPH1P40487 425 aaKnown RBP1.79□□□□□ -2.12
CTF4YPR135W FMS1P50264 508 aa1.79□□□□□ -2.12
CTF4YPR135W PSP1P50896 841 aaKnown RBP1.79□□□□□ -2.12
CTF4YPR135W SXM1Q04175 944 aaKnown RBP1.79□□□□□ -2.12
CTF4YPR135W TAF11Q04226 346 aa1.79□□□□□ -2.12
CTF4YPR135W HLR1Q04429 423 aa1.79□□□□□ -2.12
CTF4YPR135W HEL2Q05580 639 aaKnown RBP1.79□□□□□ -2.12
CTF4YPR135W PEX15Q08215 383 aa1.79□□□□□ -2.12
CTF4YPR135W PGA3Q12746 312 aaKnown RBP1.79□□□□□ -2.12
CTF4YPR135W SEC16P48415 2195 aaKnown RBP1.79□□□□□ -2.12
CTF4YPR135W MAS1P10507 462 aa1.79□□□□□ -2.12
CTF4YPR135W NCP1P16603 691 aaKnown RBP1.79□□□□□ -2.12
CTF4YPR135W FPR1P20081 114 aaKnown RBP1.79□□□□□ -2.12
CTF4YPR135W PDE1P22434 369 aa1.79□□□□□ -2.12
CTF4YPR135W PRO3P32263 286 aaKnown RBP1.79□□□□□ -2.12
CTF4YPR135W PET309P32522 965 aaPredicted RBP1.79□□□□□ -2.12
CTF4YPR135W CSE1P33307 960 aa1.79□□□□□ -2.12
CTF4YPR135W TFC3P34111 1160 aa1.79□□□□□ -2.12
CTF4YPR135W OAF3P36023 863 aa1.79□□□□□ -2.12
CTF4YPR135W SRX1P36077 127 aa1.79□□□□□ -2.12
CTF4YPR135W JNM1P36224 373 aa1.79□□□□□ -2.12
CTF4YPR135W HSL7P38274 827 aa1.79□□□□□ -2.12
CTF4YPR135W BAT1P38891 393 aaKnown RBP1.79□□□□□ -2.12
CTF4YPR135W AXL2P38928 823 aa1.79□□□□□ -2.12
CTF4YPR135W EAF5P39995 279 aa1.79□□□□□ -2.12
CTF4YPR135W TMA108P40462 946 aa1.79□□□□□ -2.12
CTF4YPR135W RLP7P40693 322 aaKnown RBP1.79□□□□□ -2.12
CTF4YPR135W PFA3P42836 336 aa1.79□□□□□ -2.12
CTF4YPR135W LAM5P43560 674 aa1.79□□□□□ -2.12
CTF4YPR135W RET2P43621 546 aa1.79□□□□□ -2.12
CTF4YPR135W IRC8P47046 822 aa1.79□□□□□ -2.12
CTF4YPR135W UBX6P47049 396 aa1.79□□□□□ -2.12
CTF4YPR135W UBC11P52492 156 aa1.79□□□□□ -2.12
CTF4YPR135W PCL10P53124 433 aa1.79□□□□□ -2.12
CTF4YPR135W YGR016WP53209 190 aa1.79□□□□□ -2.12
CTF4YPR135W CPR6P53691 371 aaKnown RBP1.79□□□□□ -2.12
CTF4YPR135W NRM1P53718 249 aa1.79□□□□□ -2.12
CTF4YPR135W SEG1Q04279 960 aa1.79□□□□□ -2.12
CTF4YPR135W TSR2Q06672 205 aaKnown RBP1.79□□□□□ -2.12
CTF4YPR135W OSW1Q08692 278 aa1.79□□□□□ -2.12
CTF4YPR135W HFI1Q12060 488 aa1.79□□□□□ -2.12
CTF4YPR135W RGT2Q12300 763 aa1.79□□□□□ -2.12
CTF4YPR135W GUK1P15454 187 aaKnown RBP1.78□□□□□ -2.12
CTF4YPR135W HOP1P20050 605 aa1.78□□□□□ -2.12
CTF4YPR135W VMA8P32610 256 aaKnown RBP1.78□□□□□ -2.12
CTF4YPR135W PSY4P38193 441 aa1.78□□□□□ -2.12
CTF4YPR135W SSY5P47002 699 aa1.78□□□□□ -2.12
CTF4YPR135W IML2P47031 731 aa1.78□□□□□ -2.12
CTF4YPR135W ORC4P54791 529 aa1.78□□□□□ -2.12
CTF4YPR135W ADA2Q02336 434 aa1.78□□□□□ -2.12
CTF4YPR135W NHX1Q04121 633 aa1.78□□□□□ -2.12
CTF4YPR135W YKU80Q04437 629 aa1.78□□□□□ -2.12
CTF4YPR135W TDA9Q04545 1251 aa1.78□□□□□ -2.12
CTF4YPR135W YDR286CQ05530 114 aa1.78□□□□□ -2.12
CTF4YPR135W SPN1Q06505 410 aaPredicted RBP1.78□□□□□ -2.12
CTF4YPR135W OPY2Q06810 360 aa1.78□□□□□ -2.12
CTF4YPR135W DNL4Q08387 944 aaPredicted RBP1.78□□□□□ -2.12
CTF4YPR135W DSE3Q08729 430 aa1.78□□□□□ -2.12
CTF4YPR135W YPR027CQ12079 277 aa1.78□□□□□ -2.12
CTF4YPR135W MEC1P38111 2368 aa1.78□□□□□ -2.12
CTF4YPR135W RPN13O13563 156 aa1.78□□□□□ -2.12
CTF4YPR135W CDC26P14724 124 aa1.78□□□□□ -2.12
CTF4YPR135W VPS34P22543 875 aa1.78□□□□□ -2.12
CTF4YPR135W YCL002CP25565 263 aa1.78□□□□□ -2.12
CTF4YPR135W GAC1P28006 793 aa1.78□□□□□ -2.12
CTF4YPR135W DPH2P32461 534 aa1.78□□□□□ -2.12
CTF4YPR135W UBS1P38290 277 aa1.78□□□□□ -2.12
CTF4YPR135W TIF5P38431 405 aaKnown RBP1.78□□□□□ -2.12
CTF4YPR135W TAN1P53072 289 aaPredicted RBP1.78□□□□□ -2.12
CTF4YPR135W SLD3P53135 668 aa1.78□□□□□ -2.12
CTF4YPR135W ARE2P53629 642 aaKnown RBP1.78□□□□□ -2.12
CTF4YPR135W GPD1Q00055 391 aaKnown RBP1.78□□□□□ -2.12
CTF4YPR135W GRX3Q03835 250 aa1.78□□□□□ -2.12
CTF4YPR135W TRM8Q12009 286 aa1.78□□□□□ -2.12
CTF4YPR135W DCS2Q12123 353 aa1.78□□□□□ -2.12
CTF4YPR135W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms