RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C TEF4P36008 412 aaKnown RBP1.75□□□□□ -2.13
NIP100YPL174C UBP13P38187 747 aa1.75□□□□□ -2.13
NIP100YPL174C UBP7P40453 1071 aa1.75□□□□□ -2.13
NIP100YPL174C PUS4P48567 403 aaKnown RBP1.75□□□□□ -2.13
NIP100YPL174C ASE1P50275 885 aa1.75□□□□□ -2.13
NIP100YPL174C CPR6P53691 371 aaKnown RBP1.75□□□□□ -2.13
NIP100YPL174C EDE1P34216 1381 aa1.75□□□□□ -2.13
NIP100YPL174C GPA1P08539 472 aa1.75□□□□□ -2.13
NIP100YPL174C LRE1P25579 583 aaKnown RBP1.75□□□□□ -2.13
NIP100YPL174C PPZ1P26570 692 aa1.75□□□□□ -2.13
NIP100YPL174C PDR3P33200 976 aa1.75□□□□□ -2.13
NIP100YPL174C TPA1P40032 644 aaKnown RBP1.75□□□□□ -2.13
NIP100YPL174C YGL082WP53155 381 aa1.75□□□□□ -2.13
NIP100YPL174C PAP2P53632 584 aaKnown RBP1.75□□□□□ -2.13
NIP100YPL174C MOT3P54785 490 aaKnown RBP1.75□□□□□ -2.13
NIP100YPL174C BLS1Q06071 122 aa1.75□□□□□ -2.13
NIP100YPL174C YLR352WQ06479 807 aa1.75□□□□□ -2.13
NIP100YPL174C CSR1Q06705 408 aaKnown RBP1.75□□□□□ -2.13
NIP100YPL174C RDR1Q08904 546 aa1.75□□□□□ -2.13
NIP100YPL174C YLR302CO13544 120 aa1.74□□□□□ -2.13
NIP100YPL174C SPE2P21182 396 aa1.74□□□□□ -2.13
NIP100YPL174C MGR1P25573 417 aa1.74□□□□□ -2.13
NIP100YPL174C FRD1P32614 470 aaKnown RBP1.74□□□□□ -2.13
NIP100YPL174C MSY1P48527 492 aa1.74□□□□□ -2.13
NIP100YPL174C MAK10Q02197 733 aa1.74□□□□□ -2.13
NIP100YPL174C ARP10Q04549 284 aa1.74□□□□□ -2.13
NIP100YPL174C APL4Q12028 832 aa1.74□□□□□ -2.13
NIP100YPL174C HXK2P04807 486 aaKnown RBP1.74□□□□□ -2.13
NIP100YPL174C PDA1P16387 420 aaKnown RBP1.74□□□□□ -2.13
NIP100YPL174C PFK26P40433 827 aaKnown RBP1.74□□□□□ -2.13
NIP100YPL174C COG1P53079 417 aa1.74□□□□□ -2.13
NIP100YPL174C PIG1Q06216 648 aa1.74□□□□□ -2.13
NIP100YPL174C YDL218WQ07629 317 aa1.74□□□□□ -2.13
NIP100YPL174C LCB1P25045 558 aaKnown RBP1.73□□□□□ -2.13
NIP100YPL174C RAD24P32641 659 aa1.73□□□□□ -2.13
NIP100YPL174C FMP46P36141 133 aaKnown RBP1.73□□□□□ -2.13
NIP100YPL174C YJL068CP40363 299 aa1.73□□□□□ -2.13
NIP100YPL174C IST3P40565 148 aaPredicted RBP1.73□□□□□ -2.13
NIP100YPL174C AZF1P41696 914 aa1.73□□□□□ -2.13
NIP100YPL174C IML2P47031 731 aa1.73□□□□□ -2.13
NIP100YPL174C IMA1P53051 589 aa1.73□□□□□ -2.13
NIP100YPL174C CUL3P53202 744 aa1.73□□□□□ -2.13
NIP100YPL174C ESBP6P53918 673 aa1.73□□□□□ -2.13
NIP100YPL174C MRPL13Q02204 264 aa1.73□□□□□ -2.13
NIP100YPL174C CTL1Q03220 320 aaKnown RBP1.73□□□□□ -2.13
NIP100YPL174C YLR455WQ06188 304 aa1.73□□□□□ -2.13
NIP100YPL174C TMA16Q08687 178 aa1.73□□□□□ -2.13
NIP100YPL174C CSR2Q12734 1121 aa1.73□□□□□ -2.13
NIP100YPL174C YBR138CP38277 524 aa1.73□□□□□ -2.13
NIP100YPL174C SPC72P39723 622 aa1.73□□□□□ -2.13
NIP100YPL174C PCL6P40038 420 aa1.73□□□□□ -2.13
NIP100YPL174C PUG1P40100 303 aa1.73□□□□□ -2.13
NIP100YPL174C SMK1P41808 388 aa1.73□□□□□ -2.13
NIP100YPL174C GIS2P53849 153 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
NIP100YPL174C YNK1P36010 153 aaKnown RBP1.72□□□□□ -2.13
NIP100YPL174C ESL2P36168 1195 aa1.72□□□□□ -2.13
NIP100YPL174C IAH1P41734 238 aa1.72□□□□□ -2.13
NIP100YPL174C ZDS2P54786 942 aa1.72□□□□□ -2.13
NIP100YPL174C ECM16Q04217 1267 aaKnown RBP1.72□□□□□ -2.13
NIP100YPL174C PSR2Q07949 397 aa1.72□□□□□ -2.13
NIP100YPL174C NUS1Q12063 375 aa1.72□□□□□ -2.13
NIP100YPL174C SSM4P40318 1319 aa1.72□□□□□ -2.13
NIP100YPL174C HNM1P19807 563 aa1.72□□□□□ -2.13
NIP100YPL174C TKL1P23254 680 aaKnown RBP1.72□□□□□ -2.13
NIP100YPL174C MCM4P30665 933 aaKnown RBP1.72□□□□□ -2.13
NIP100YPL174C SAC1P32368 623 aaKnown RBP1.72□□□□□ -2.13
NIP100YPL174C RPN2P32565 945 aaKnown RBP1.72□□□□□ -2.13
NIP100YPL174C PTH2P34222 208 aa1.72□□□□□ -2.13
NIP100YPL174C NTR2P36118 322 aaPredicted RBP1.72□□□□□ -2.13
NIP100YPL174C YPK3P38070 525 aa1.72□□□□□ -2.13
NIP100YPL174C DHH1P39517 506 aaKnown RBP1.72□□□□□ -2.13
NIP100YPL174C TGL2P54857 326 aa1.72□□□□□ -2.13
NIP100YPL174C REG1Q00816 1014 aa1.72□□□□□ -2.13
NIP100YPL174C YMR317WQ04893 1140 aa1.72□□□□□ -2.13
NIP100YPL174C BSC1Q12140 328 aa1.72□□□□□ -2.13
NIP100YPL174C RRP6Q12149 733 aaKnown RBP1.72□□□□□ -2.13
NIP100YPL174C ATP4P05626 244 aa1.71□□□□□ -2.13
NIP100YPL174C TY2A-LR1P0C2J4 438 aa1.71□□□□□ -2.13
NIP100YPL174C YML003WP0CF16 290 aa1.71□□□□□ -2.13
NIP100YPL174C YML002WP0CF17 737 aa1.71□□□□□ -2.13
NIP100YPL174C TY2A-FP0CX61 438 aa1.71□□□□□ -2.13
NIP100YPL174C TY2A-GR2P0CX62 438 aa1.71□□□□□ -2.13
NIP100YPL174C TY2A-CP25383 438 aa1.71□□□□□ -2.13
NIP100YPL174C AFG3P39925 761 aa1.71□□□□□ -2.13
NIP100YPL174C CDC1P40986 491 aa1.71□□□□□ -2.13
NIP100YPL174C ATG27P46989 271 aa1.71□□□□□ -2.13
NIP100YPL174C TY2A-DR2Q03483 438 aa1.71□□□□□ -2.13
NIP100YPL174C YMR254CQ04838 102 aa1.71□□□□□ -2.13
NIP100YPL174C ARP9Q05123 467 aa1.71□□□□□ -2.13
NIP100YPL174C TY2A-BQ12260 438 aa1.71□□□□□ -2.13
NIP100YPL174C TY2A-OR2Q12293 438 aa1.71□□□□□ -2.13
NIP100YPL174C TY2A-DR1Q12392 438 aa1.71□□□□□ -2.13
NIP100YPL174C TY2A-OR1Q12439 438 aa1.71□□□□□ -2.13
NIP100YPL174C TY2A-DR3Q99303 438 aa1.71□□□□□ -2.13
NIP100YPL174C MRS6P32864 603 aaKnown RBP1.71□□□□□ -2.14
NIP100YPL174C YKL050CP35736 922 aa1.71□□□□□ -2.14
NIP100YPL174C MIC60P36112 540 aa1.71□□□□□ -2.14
NIP100YPL174C YHL041WP38730 149 aa1.71□□□□□ -2.14
NIP100YPL174C PHM8P40025 321 aa1.71□□□□□ -2.14
NIP100YPL174C YFR020WP43600 232 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms