RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C ARC35P53731 342 aaKnown RBP3.33□□□□□ -1.88
LCB4YOR171C YNR061CP53747 219 aa3.33□□□□□ -1.88
LCB4YOR171C CBK1P53894 756 aa3.33□□□□□ -1.88
LCB4YOR171C RSF1Q05043 376 aa3.33□□□□□ -1.88
LCB4YOR171C SPH1Q06160 661 aa3.33□□□□□ -1.88
LCB4YOR171C ARR1Q06596 294 aa3.33□□□□□ -1.88
LCB4YOR171C DIA2Q08496 732 aaPredicted RBP3.33□□□□□ -1.88
LCB4YOR171C CWC2Q12046 339 aaPredicted RBP3.33□□□□□ -1.88
LCB4YOR171C TY3A-GQ12173 290 aa3.33□□□□□ -1.88
LCB4YOR171C ARP7Q12406 477 aa3.33□□□□□ -1.88
LCB4YOR171C TY3A-IQ99219 290 aa3.33□□□□□ -1.88
LCB4YOR171C ARG3P05150 338 aa3.33□□□□□ -1.88
LCB4YOR171C BIK1P11709 440 aa3.33□□□□□ -1.88
LCB4YOR171C ADK2P26364 225 aa3.33□□□□□ -1.88
LCB4YOR171C BUD14P27637 709 aa3.33□□□□□ -1.88
LCB4YOR171C MGM101P32787 269 aaKnown RBP3.33□□□□□ -1.88
LCB4YOR171C UBP11P36026 717 aa3.33□□□□□ -1.88
LCB4YOR171C PXL1P36166 706 aa3.33□□□□□ -1.88
LCB4YOR171C PPS1P38148 807 aa3.33□□□□□ -1.88
LCB4YOR171C CDS1P38221 457 aa3.33□□□□□ -1.88
LCB4YOR171C MSG5P38590 489 aa3.33□□□□□ -1.88
LCB4YOR171C YHR033WP38690 423 aa3.33□□□□□ -1.88
LCB4YOR171C SFB3P38810 929 aa3.33□□□□□ -1.88
LCB4YOR171C CHS7P38843 316 aa3.33□□□□□ -1.88
LCB4YOR171C TMN3P40071 706 aa3.33□□□□□ -1.88
LCB4YOR171C ATF1P40353 525 aa3.33□□□□□ -1.88
LCB4YOR171C YIL077CP40508 320 aa3.33□□□□□ -1.88
LCB4YOR171C PRM2P40534 656 aa3.33□□□□□ -1.88
LCB4YOR171C GCN20P43535 752 aaKnown RBP3.33□□□□□ -1.88
LCB4YOR171C FET5P43561 622 aa3.33□□□□□ -1.88
LCB4YOR171C MLC1P53141 149 aa3.33□□□□□ -1.88
LCB4YOR171C JJJ1P53863 590 aa3.33□□□□□ -1.88
LCB4YOR171C PPN1Q04119 674 aa3.33□□□□□ -1.88
LCB4YOR171C GTB1Q04924 702 aa3.33□□□□□ -1.88
LCB4YOR171C VID22Q05934 901 aa3.33□□□□□ -1.88
LCB4YOR171C ECM7Q06200 448 aa3.33□□□□□ -1.88
LCB4YOR171C TRM8Q12009 286 aa3.33□□□□□ -1.88
LCB4YOR171C AHC1Q12433 566 aa3.33□□□□□ -1.88
LCB4YOR171C RTN2Q12443 393 aa3.33□□□□□ -1.88
LCB4YOR171C SEC39Q12745 709 aa3.33□□□□□ -1.88
LCB4YOR171C LEU2P04173 364 aaPredicted RBP3.32□□□□□ -1.88
LCB4YOR171C RPS9BP05755 195 aaKnown RBP3.32□□□□□ -1.88
LCB4YOR171C YEL076C-AP0CX16 216 aa3.32□□□□□ -1.88
LCB4YOR171C YLR464WP0CX17 216 aa3.32□□□□□ -1.88
LCB4YOR171C HOP1P20050 605 aa3.32□□□□□ -1.88
LCB4YOR171C OLE1P21147 510 aaKnown RBP3.32□□□□□ -1.88
LCB4YOR171C PRD1P25375 712 aa3.32□□□□□ -1.88
LCB4YOR171C SGF29P25554 259 aa3.32□□□□□ -1.88
LCB4YOR171C FEN2P25621 512 aaKnown RBP3.32□□□□□ -1.88
LCB4YOR171C HIR2P32480 875 aa3.32□□□□□ -1.88
LCB4YOR171C SRB4P32569 687 aa3.32□□□□□ -1.88
LCB4YOR171C PTR2P32901 601 aa3.32□□□□□ -1.88
LCB4YOR171C GCS1P35197 352 aa3.32□□□□□ -1.88
LCB4YOR171C PHO11P35842 467 aa3.32□□□□□ -1.88
LCB4YOR171C CUE2P36075 443 aaKnown RBP3.32□□□□□ -1.88
LCB4YOR171C YKL023WP36103 277 aaKnown RBP3.32□□□□□ -1.88
LCB4YOR171C STV1P37296 890 aa3.32□□□□□ -1.88
LCB4YOR171C MMS4P38257 691 aa3.32□□□□□ -1.88
LCB4YOR171C PHO12P38693 467 aa3.32□□□□□ -1.88
LCB4YOR171C MSR1P38714 643 aa3.32□□□□□ -1.88
LCB4YOR171C PPE1P38796 400 aa3.32□□□□□ -1.88
LCB4YOR171C YEL076CP39971 216 aa3.32□□□□□ -1.88
LCB4YOR171C YER010CP40011 234 aa3.32□□□□□ -1.88
LCB4YOR171C LYS14P40971 790 aa3.32□□□□□ -1.88
LCB4YOR171C ROK1P45818 564 aaPredicted RBP3.32□□□□□ -1.88
LCB4YOR171C MSE1P48525 536 aa3.32□□□□□ -1.88
LCB4YOR171C RFX1P48743 811 aa3.32□□□□□ -1.88
LCB4YOR171C YGR054WP53235 642 aaKnown RBP3.32□□□□□ -1.88
LCB4YOR171C ART5P53244 586 aaKnown RBP3.32□□□□□ -1.88
LCB4YOR171C FHN1P53279 174 aa3.32□□□□□ -1.88
LCB4YOR171C MRPL13Q02204 264 aa3.32□□□□□ -1.88
LCB4YOR171C MGR3Q04472 501 aa3.32□□□□□ -1.88
LCB4YOR171C AIM32Q04689 311 aa3.32□□□□□ -1.88
LCB4YOR171C CRN1Q06440 651 aa3.32□□□□□ -1.88
LCB4YOR171C LOT6Q07923 191 aa3.32□□□□□ -1.88
LCB4YOR171C MLH3Q12083 715 aa3.32□□□□□ -1.88
LCB4YOR171C YKL033W-AQ86ZR7 236 aa3.32□□□□□ -1.88
LCB4YOR171C FUM1P08417 488 aaKnown RBP3.31□□□□□ -1.88
LCB4YOR171C TUP1P16649 713 aa3.31□□□□□ -1.88
LCB4YOR171C PRP22P24384 1145 aaKnown RBP3.31□□□□□ -1.88
LCB4YOR171C MIA40P36046 403 aa3.31□□□□□ -1.88
LCB4YOR171C MRPL40P36534 297 aa3.31□□□□□ -1.88
LCB4YOR171C COS111P38308 924 aa3.31□□□□□ -1.88
LCB4YOR171C REV7P38927 245 aa3.31□□□□□ -1.88
LCB4YOR171C MRX1P40050 688 aa3.31□□□□□ -1.88
LCB4YOR171C PIG2P40187 538 aa3.31□□□□□ -1.88
LCB4YOR171C YIL092WP40497 633 aa3.31□□□□□ -1.88
LCB4YOR171C LIA1P47120 325 aaKnown RBP3.31□□□□□ -1.88
LCB4YOR171C ASK10P48361 1146 aa3.31□□□□□ -1.88
LCB4YOR171C CGR1P53188 120 aa3.31□□□□□ -1.88
LCB4YOR171C OGG1P53397 376 aaPredicted RBP3.31□□□□□ -1.88
LCB4YOR171C VPS20Q04272 221 aa3.31□□□□□ -1.88
LCB4YOR171C HLR1Q04429 423 aa3.31□□□□□ -1.88
LCB4YOR171C UFO1Q04511 668 aa3.31□□□□□ -1.88
LCB4YOR171C ECM18Q04623 453 aa3.31□□□□□ -1.88
LCB4YOR171C DON1Q05610 365 aa3.31□□□□□ -1.88
LCB4YOR171C YLR456WQ06199 204 aa3.31□□□□□ -1.88
LCB4YOR171C YFT2Q06676 274 aa3.31□□□□□ -1.88
LCB4YOR171C SLK19Q08581 821 aaKnown RBP3.31□□□□□ -1.88
LCB4YOR171C PUS9Q12069 462 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms