RNA–Protein interactions for RNA: YNL335W

DDI3, Transcript of Protein of unknown function, yeast

Gene DDI3, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DDI3	YNL335W	ADE17	P38009	592 aa	Known RBP	4.59	□□□□□ -1.67
DDI3	YNL335W	SEC31	P38968	1273 aa	Known RBP	4.59	□□□□□ -1.67
DDI3	YNL335W	YEL068C	P39977	110 aa		4.59	□□□□□ -1.67
DDI3	YNL335W	TMA108	P40462	946 aa		4.59	□□□□□ -1.67
DDI3	YNL335W	IME4	P41833	600 aa		4.59	□□□□□ -1.67
DDI3	YNL335W	SWP82	P43554	623 aa		4.59	□□□□□ -1.67
DDI3	YNL335W	IDP3	P53982	420 aa	Known RBP	4.59	□□□□□ -1.67
DDI3	YNL335W	ERG13	P54839	491 aa	Known RBP	4.59	□□□□□ -1.67
DDI3	YNL335W	MUB1	Q03162	620 aa		4.59	□□□□□ -1.67
DDI3	YNL335W	VPS72	Q03388	795 aa		4.59	□□□□□ -1.67
DDI3	YNL335W	YBR085C-A	O43137	85 aa		4.58	□□□□□ -1.68
DDI3	YNL335W	UBP13	P38187	747 aa		4.58	□□□□□ -1.68
DDI3	YNL335W	SLZ1	P40167	298 aa		4.58	□□□□□ -1.68
DDI3	YNL335W	ARC1	P46672	376 aa	Known RBP	4.58	□□□□□ -1.68
DDI3	YNL335W	RSC9	Q03124	581 aa		4.58	□□□□□ -1.68
DDI3	YNL335W	RSM28	Q03430	361 aa		4.58	□□□□□ -1.68
DDI3	YNL335W	YDR056C	Q12025	205 aa		4.58	□□□□□ -1.68
DDI3	YNL335W	CDC24	P11433	854 aa	Predicted RBP	4.57	□□□□□ -1.68
DDI3	YNL335W	COQ3	P27680	312 aa		4.57	□□□□□ -1.68
DDI3	YNL335W	MUD2	P36084	527 aa	Known RBP	4.57	□□□□□ -1.68
DDI3	YNL335W	ARN1	P38731	627 aa		4.57	□□□□□ -1.68
DDI3	YNL335W	FMP10	P40098	244 aa		4.57	□□□□□ -1.68
DDI3	YNL335W	LTP1	P40347	161 aa		4.57	□□□□□ -1.68
DDI3	YNL335W	XBP1	P40489	647 aa		4.57	□□□□□ -1.68
DDI3	YNL335W	ULP2	P40537	1034 aa	Predicted RBP	4.57	□□□□□ -1.68
DDI3	YNL335W	CDC1	P40986	491 aa		4.57	□□□□□ -1.68
DDI3	YNL335W	SIP4	P46954	829 aa		4.57	□□□□□ -1.68
DDI3	YNL335W	AAD10	P47182	288 aa		4.57	□□□□□ -1.68
DDI3	YNL335W	YNR061C	P53747	219 aa		4.57	□□□□□ -1.68
DDI3	YNL335W	TMA64	Q04600	565 aa	Known RBP	4.57	□□□□□ -1.68
DDI3	YNL335W	GPN2	Q08726	347 aa	Predicted RBP	4.57	□□□□□ -1.68
DDI3	YNL335W	YLR049C	Q12110	428 aa		4.57	□□□□□ -1.68
DDI3	YNL335W	GET3	Q12154	354 aa	Known RBP	4.57	□□□□□ -1.68
DDI3	YNL335W	ENT1	Q12518	454 aa		4.57	□□□□□ -1.68
DDI3	YNL335W	YOR111W	Q99210	232 aa		4.57	□□□□□ -1.68
DDI3	YNL335W	CDC16	P09798	840 aa		4.56	□□□□□ -1.68
DDI3	YNL335W	ECM10	P39987	644 aa		4.56	□□□□□ -1.68
DDI3	YNL335W	LYS14	P40971	790 aa		4.56	□□□□□ -1.68
DDI3	YNL335W	RPN11	P43588	306 aa	Known RBP	4.56	□□□□□ -1.68
DDI3	YNL335W	IST1	P53843	298 aa	Predicted RBP	4.56	□□□□□ -1.68
DDI3	YNL335W	PDR8	Q06149	701 aa		4.56	□□□□□ -1.68
DDI3	YNL335W	SKG3	Q06315	1026 aa		4.56	□□□□□ -1.68
DDI3	YNL335W	ENT4	Q07872	247 aa		4.56	□□□□□ -1.68
DDI3	YNL335W	MCH4	Q08268	501 aa		4.56	□□□□□ -1.68
DDI3	YNL335W	HXK2	P04807	486 aa	Known RBP	4.55	□□□□□ -1.68
DDI3	YNL335W	YMR085W	P0CF18	432 aa		4.55	□□□□□ -1.68
DDI3	YNL335W	YCR006C	P25350	157 aa		4.55	□□□□□ -1.68
DDI3	YNL335W	PAH1	P32567	862 aa		4.55	□□□□□ -1.68
DDI3	YNL335W	OCT1	P35999	772 aa		4.55	□□□□□ -1.68
DDI3	YNL335W	TPA1	P40032	644 aa	Known RBP	4.55	□□□□□ -1.68
DDI3	YNL335W	SEC24	P40482	926 aa	Known RBP	4.55	□□□□□ -1.68
DDI3	YNL335W	PSA1	P41940	361 aa	Known RBP	4.55	□□□□□ -1.68
DDI3	YNL335W	YJL107C	P42947	387 aa		4.55	□□□□□ -1.68
DDI3	YNL335W	CTK2	P46962	323 aa		4.55	□□□□□ -1.68
DDI3	YNL335W	PIL1	P53252	339 aa	Known RBP	4.55	□□□□□ -1.68
DDI3	YNL335W	YLR455W	Q06188	304 aa		4.55	□□□□□ -1.68
DDI3	YNL335W	PFA4	Q12006	378 aa		4.55	□□□□□ -1.68
DDI3	YNL335W	SPT6	P23615	1451 aa	Known RBP	4.55	□□□□□ -1.68
DDI3	YNL335W	PET111	P08468	800 aa		4.54	□□□□□ -1.68
DDI3	YNL335W	PTP1	P25044	335 aa		4.54	□□□□□ -1.68
DDI3	YNL335W	ESL2	P36168	1195 aa		4.54	□□□□□ -1.68
DDI3	YNL335W	NOP16	P40007	231 aa	Known RBP	4.54	□□□□□ -1.68
DDI3	YNL335W	INN1	P53901	409 aa		4.54	□□□□□ -1.68
DDI3	YNL335W	YSA1	Q01976	231 aa		4.54	□□□□□ -1.68
DDI3	YNL335W	PFA5	Q03289	374 aa		4.54	□□□□□ -1.68
DDI3	YNL335W	RAD30	Q04049	632 aa		4.54	□□□□□ -1.68
DDI3	YNL335W	VIP1	Q06685	1146 aa	Known RBP	4.54	□□□□□ -1.68
DDI3	YNL335W	CRC1	Q12289	327 aa		4.54	□□□□□ -1.68
DDI3	YNL335W	GPA1	P08539	472 aa		4.53	□□□□□ -1.68
DDI3	YNL335W	YAP1	P19880	650 aa	Known RBP	4.53	□□□□□ -1.68
DDI3	YNL335W	SAN1	P22470	610 aa		4.53	□□□□□ -1.68
DDI3	YNL335W	YBL029W	P38201	376 aa		4.53	□□□□□ -1.68
DDI3	YNL335W	RTS1	P38903	757 aa		4.53	□□□□□ -1.68
DDI3	YNL335W	BNA3	P47039	444 aa	Known RBP	4.53	□□□□□ -1.68
DDI3	YNL335W	UBP8	P50102	471 aa		4.53	□□□□□ -1.68
DDI3	YNL335W	COP1	P53622	1201 aa	Known RBP	4.53	□□□□□ -1.68
DDI3	YNL335W	INA17	Q02888	182 aa		4.53	□□□□□ -1.68
DDI3	YNL335W	PSR1	Q07800	427 aa		4.53	□□□□□ -1.68
DDI3	YNL335W	RIX7	Q07844	837 aa	Known RBP	4.53	□□□□□ -1.68
DDI3	YNL335W	TCO89	Q08921	799 aa		4.53	□□□□□ -1.68
DDI3	YNL335W	HUA2	Q12134	243 aa		4.53	□□□□□ -1.68
DDI3	YNL335W	SEM1	O94742	89 aa		4.52	□□□□□ -1.69
DDI3	YNL335W	RPL19A	P0CX82	189 aa	Known RBP	4.52	□□□□□ -1.69
DDI3	YNL335W	RPL19B	P0CX83	189 aa	Predicted RBP	4.52	□□□□□ -1.69
DDI3	YNL335W	PKP1	P40530	394 aa		4.52	□□□□□ -1.69
DDI3	YNL335W	YIL024C	P40543	189 aa		4.52	□□□□□ -1.69
DDI3	YNL335W	YFR020W	P43600	232 aa		4.52	□□□□□ -1.69
DDI3	YNL335W	DPB11	P47027	764 aa	Predicted RBP	4.52	□□□□□ -1.69
DDI3	YNL335W	NET1	P47035	1189 aa		4.52	□□□□□ -1.69
DDI3	YNL335W	YGL036W	P53185	909 aa	Predicted RBP	4.52	□□□□□ -1.69
DDI3	YNL335W	YML122C	Q03207	126 aa		4.52	□□□□□ -1.69
DDI3	YNL335W	PIG1	Q06216	648 aa		4.52	□□□□□ -1.69
DDI3	YNL335W	RRI2	Q12348	645 aa		4.52	□□□□□ -1.69
DDI3	YNL335W	RRI1	Q12468	440 aa		4.52	□□□□□ -1.69
DDI3	YNL335W	YBR126W-A	Q8TGU7	68 aa		4.52	□□□□□ -1.69
DDI3	YNL335W	THO2	P53552	1597 aa	Known RBP	4.52	□□□□□ -1.69
DDI3	YNL335W	HIR3	P47171	1648 aa		4.51	□□□□□ -1.69
DDI3	YNL335W	YER145C-A	A0A023PYF4	145 aa		4.51	□□□□□ -1.69
DDI3	YNL335W	RAP1	P11938	827 aa		4.51	□□□□□ -1.69
DDI3	YNL335W	AAC3	P18238	307 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms