RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W ENT4Q07872 247 aa2.57□□□□□ -2
HRD3YLR207W NUS1Q12063 375 aa2.57□□□□□ -2
HRD3YLR207W ERG27Q12452 347 aaKnown RBP2.57□□□□□ -2
HRD3YLR207W ILS1P09436 1072 aaKnown RBP2.57□□□□□ -2
HRD3YLR207W CBS1P14066 229 aa2.57□□□□□ -2
HRD3YLR207W VMA2P16140 517 aaKnown RBP2.57□□□□□ -2
HRD3YLR207W TUP1P16649 713 aa2.57□□□□□ -2
HRD3YLR207W PWP1P21304 576 aaKnown RBP2.57□□□□□ -2
HRD3YLR207W REC107P21651 314 aa2.57□□□□□ -2
HRD3YLR207W YCK1P23291 538 aa2.57□□□□□ -2
HRD3YLR207W FEN2P25621 512 aaKnown RBP2.57□□□□□ -2
HRD3YLR207W REG2P38232 338 aa2.57□□□□□ -2
HRD3YLR207W CRG1P38892 291 aaRIP-Chip data2.57□□□□□ -2not detected
HRD3YLR207W GET2P40056 285 aa2.57□□□□□ -2
HRD3YLR207W TMN3P40071 706 aa2.57□□□□□ -2
HRD3YLR207W MUP1P50276 574 aa2.57□□□□□ -2
HRD3YLR207W NNF2P53253 936 aa2.57□□□□□ -2
HRD3YLR207W YGR250CP53316 781 aaKnown RBP2.57□□□□□ -2
HRD3YLR207W TRS31Q03337 283 aa2.57□□□□□ -2
HRD3YLR207W PRP42Q03776 544 aaKnown RBP2.57□□□□□ -2
HRD3YLR207W YMR111CQ04461 462 aaPredicted RBP2.57□□□□□ -2
HRD3YLR207W YFT2Q06676 274 aa2.57□□□□□ -2
HRD3YLR207W RLP24Q07915 199 aaKnown RBP2.57□□□□□ -2
HRD3YLR207W ENB1Q08299 606 aa2.57□□□□□ -2
HRD3YLR207W GET3Q12154 354 aaKnown RBP2.57□□□□□ -2
HRD3YLR207W NFI1Q12216 726 aa2.57□□□□□ -2
HRD3YLR207W PDH1Q12428 516 aaKnown RBP2.57□□□□□ -2
HRD3YLR207W PGA3Q12746 312 aaKnown RBP2.57□□□□□ -2
HRD3YLR207W SWI1P09547 1314 aa2.56□□□□□ -2
HRD3YLR207W ATP2P00830 511 aaKnown RBP2.56□□□□□ -2
HRD3YLR207W CDC6P09119 513 aa2.56□□□□□ -2
HRD3YLR207W PET122P10355 254 aa2.56□□□□□ -2
HRD3YLR207W PRP28P23394 588 aa2.56□□□□□ -2
HRD3YLR207W CLB3P24870 427 aa2.56□□□□□ -2
HRD3YLR207W EFT1P32324 842 aaKnown RBP2.56□□□□□ -2
HRD3YLR207W MRP20P32387 263 aa2.56□□□□□ -2
HRD3YLR207W DCG1P32460 244 aa2.56□□□□□ -2
HRD3YLR207W GCS1P35197 352 aa2.56□□□□□ -2
HRD3YLR207W FTH1P38310 465 aa2.56□□□□□ -2
HRD3YLR207W RTS1P38903 757 aa2.56□□□□□ -2
HRD3YLR207W FLC2P39719 783 aa2.56□□□□□ -2
HRD3YLR207W PFK26P40433 827 aaKnown RBP2.56□□□□□ -2
HRD3YLR207W SIP4P46954 829 aa2.56□□□□□ -2
HRD3YLR207W SGF73P53165 657 aa2.56□□□□□ -2
HRD3YLR207W NCS2P53923 493 aaPredicted RBP2.56□□□□□ -2
HRD3YLR207W REG1Q00816 1014 aa2.56□□□□□ -2
HRD3YLR207W OAZ1Q02803 292 aa2.56□□□□□ -2
HRD3YLR207W YDR131CQ03899 556 aa2.56□□□□□ -2
HRD3YLR207W SKG3Q06315 1026 aa2.56□□□□□ -2
HRD3YLR207W ICL2Q12031 575 aa2.56□□□□□ -2
HRD3YLR207W RIM20Q12033 661 aa2.56□□□□□ -2
HRD3YLR207W CHS5Q12114 671 aaKnown RBP2.56□□□□□ -2
HRD3YLR207W NOP58Q12499 511 aaKnown RBP2.56□□□□□ -2
HRD3YLR207W FKS3Q04952 1785 aa2.56□□□□□ -2
HRD3YLR207W RPP0P05317 312 aaKnown RBP2.56□□□□□ -2
HRD3YLR207W RPL19AP0CX82 189 aaKnown RBP2.56□□□□□ -2
HRD3YLR207W RPL19BP0CX83 189 aaPredicted RBP2.56□□□□□ -2
HRD3YLR207W ABF1P14164 731 aa2.56□□□□□ -2
HRD3YLR207W VPS33P20795 691 aa2.56□□□□□ -2
HRD3YLR207W ADK2P26364 225 aa2.56□□□□□ -2
HRD3YLR207W MGM1P32266 881 aa2.56□□□□□ -2
HRD3YLR207W SMI1P32566 505 aa2.56□□□□□ -2
HRD3YLR207W DSS4P32601 143 aa2.56□□□□□ -2
HRD3YLR207W MTC7P32633 139 aa2.56□□□□□ -2
HRD3YLR207W BCS1P32839 456 aa2.56□□□□□ -2
HRD3YLR207W STB6P36085 766 aa2.56□□□□□ -2
HRD3YLR207W EHT1P38295 451 aa2.56□□□□□ -2
HRD3YLR207W ELO3P40319 345 aa2.56□□□□□ -2
HRD3YLR207W ZIM17P42844 174 aa2.56□□□□□ -2
HRD3YLR207W YML119WQ03208 357 aa2.56□□□□□ -2
HRD3YLR207W RCO1Q04779 684 aa2.56□□□□□ -2
HRD3YLR207W TMA10Q06177 86 aa2.56□□□□□ -2
HRD3YLR207W CUE5Q08412 411 aaKnown RBP2.56□□□□□ -2
HRD3YLR207W FRE6Q12473 712 aa2.56□□□□□ -2
HRD3YLR207W TY2A-LR1P0C2J4 438 aa2.55□□□□□ -2
HRD3YLR207W TY2A-FP0CX61 438 aa2.55□□□□□ -2
HRD3YLR207W TY2A-GR2P0CX62 438 aa2.55□□□□□ -2
HRD3YLR207W TY2A-CP25383 438 aa2.55□□□□□ -2
HRD3YLR207W YPT7P32939 208 aa2.55□□□□□ -2
HRD3YLR207W STB5P38699 743 aa2.55□□□□□ -2
HRD3YLR207W FMO1P38866 432 aa2.55□□□□□ -2
HRD3YLR207W LTP1P40347 161 aa2.55□□□□□ -2
HRD3YLR207W RFX1P48743 811 aa2.55□□□□□ -2
HRD3YLR207W MRPS35P53292 345 aa2.55□□□□□ -2
HRD3YLR207W JJJ1P53863 590 aa2.55□□□□□ -2
HRD3YLR207W EOS1P53938 366 aa2.55□□□□□ -2
HRD3YLR207W SSL2Q00578 843 aa2.55□□□□□ -2
HRD3YLR207W ADA2Q02336 434 aa2.55□□□□□ -2
HRD3YLR207W SLU7Q02775 382 aaKnown RBP2.55□□□□□ -2
HRD3YLR207W TY2A-DR2Q03483 438 aa2.55□□□□□ -2
HRD3YLR207W YDR132CQ03900 495 aa2.55□□□□□ -2
HRD3YLR207W ERB1Q04660 807 aaKnown RBP2.55□□□□□ -2
HRD3YLR207W HOF1Q05080 669 aa2.55□□□□□ -2
HRD3YLR207W TY2A-BQ12260 438 aa2.55□□□□□ -2
HRD3YLR207W TY2A-OR2Q12293 438 aa2.55□□□□□ -2
HRD3YLR207W TY2A-DR1Q12392 438 aa2.55□□□□□ -2
HRD3YLR207W TY2A-OR1Q12439 438 aa2.55□□□□□ -2
HRD3YLR207W TY2A-DR3Q99303 438 aa2.55□□□□□ -2
HRD3YLR207W RPC40P07703 335 aaKnown RBP2.54□□□□□ -2
HRD3YLR207W UBP11P36026 717 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms