RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W VPS45P38932 577 aa3.88□□□□□ -1.79
UBP12YJL197W PKP1P40530 394 aa3.88□□□□□ -1.79
UBP12YJL197W FET5P43561 622 aa3.88□□□□□ -1.79
UBP12YJL197W YGR111WP53265 400 aa3.88□□□□□ -1.79
UBP12YJL197W PRO2P54885 456 aaKnown RBP3.88□□□□□ -1.79
UBP12YJL197W MAK10Q02197 733 aa3.88□□□□□ -1.79
UBP12YJL197W FIN1Q03898 291 aa3.88□□□□□ -1.79
UBP12YJL197W DON1Q05610 365 aa3.88□□□□□ -1.79
UBP12YJL197W SEC39Q12745 709 aa3.88□□□□□ -1.79
UBP12YJL197W MSB1P21339 1137 aaKnown RBP3.88□□□□□ -1.79
UBP12YJL197W PDE1P22434 369 aa3.88□□□□□ -1.79
UBP12YJL197W ERG6P25087 383 aaKnown RBP3.88□□□□□ -1.79
UBP12YJL197W LOT5P34234 306 aa3.88□□□□□ -1.79
UBP12YJL197W DEF1P35732 738 aaKnown RBP3.88□□□□□ -1.79
UBP12YJL197W COS111P38308 924 aa3.88□□□□□ -1.79
UBP12YJL197W PIG2P40187 538 aa3.88□□□□□ -1.79
UBP12YJL197W MKT1P40850 830 aaKnown RBP3.88□□□□□ -1.79
UBP12YJL197W RAD33Q04231 177 aa3.88□□□□□ -1.79
UBP12YJL197W GAL10P04397 699 aa3.87□□□□□ -1.79
UBP12YJL197W RPL6BP05739 176 aaKnown RBP3.87□□□□□ -1.79
UBP12YJL197W YML003WP0CF16 290 aa3.87□□□□□ -1.79
UBP12YJL197W YGR054WP53235 642 aaKnown RBP3.87□□□□□ -1.79
UBP12YJL197W PDR16P53860 351 aaKnown RBP3.87□□□□□ -1.79
UBP12YJL197W RPL6AQ02326 176 aaKnown RBP3.87□□□□□ -1.79
UBP12YJL197W YDR239CQ03780 787 aa3.87□□□□□ -1.79
UBP12YJL197W YOR019WQ99248 730 aa3.87□□□□□ -1.79
UBP12YJL197W RPL1AP0CX43 217 aaKnown RBP3.87□□□□□ -1.79
UBP12YJL197W RPL1BP0CX44 217 aaKnown RBP3.87□□□□□ -1.79
UBP12YJL197W OM45P16547 393 aa3.87□□□□□ -1.79
UBP12YJL197W EMC1P25574 760 aa3.87□□□□□ -1.79
UBP12YJL197W ERV1P27882 189 aa3.87□□□□□ -1.79
UBP12YJL197W VPS41P38959 992 aa3.87□□□□□ -1.79
UBP12YJL197W HXT14P42833 540 aa3.87□□□□□ -1.79
UBP12YJL197W CTK2P46962 323 aa3.87□□□□□ -1.79
UBP12YJL197W PET130P47065 347 aa3.87□□□□□ -1.79
UBP12YJL197W SHE4P51534 789 aa3.87□□□□□ -1.79
UBP12YJL197W RIA1P53893 1110 aa3.87□□□□□ -1.79
UBP12YJL197W YDR444WQ04093 687 aa3.87□□□□□ -1.79
UBP12YJL197W DBP9Q06218 594 aaKnown RBP3.87□□□□□ -1.79
UBP12YJL197W CHS2P14180 963 aa3.87□□□□□ -1.79
UBP12YJL197W SUR1P33300 382 aa3.87□□□□□ -1.79
UBP12YJL197W YIL077CP40508 320 aa3.87□□□□□ -1.79
UBP12YJL197W DOT5P40553 215 aa3.87□□□□□ -1.79
UBP12YJL197W BAP3P41815 604 aa3.87□□□□□ -1.79
UBP12YJL197W MLC1P53141 149 aa3.87□□□□□ -1.79
UBP12YJL197W SPC98P53540 846 aa3.87□□□□□ -1.79
UBP12YJL197W YNR068CP53754 272 aa3.87□□□□□ -1.79
UBP12YJL197W ORC3P54790 616 aa3.87□□□□□ -1.79
UBP12YJL197W PEX19Q07418 342 aa3.87□□□□□ -1.79
UBP12YJL197W BAG7Q12128 409 aa3.87□□□□□ -1.79
UBP12YJL197W FEN2P25621 512 aaKnown RBP3.86□□□□□ -1.79
UBP12YJL197W PIM1P36775 1133 aa3.86□□□□□ -1.79
UBP12YJL197W ADH5P38113 351 aaKnown RBP3.86□□□□□ -1.79
UBP12YJL197W PCH2P38126 564 aa3.86□□□□□ -1.79
UBP12YJL197W RPP1P38786 293 aa3.86□□□□□ -1.79
UBP12YJL197W CHS6P40955 746 aa3.86□□□□□ -1.79
UBP12YJL197W LSB3P43603 459 aaKnown RBP3.86□□□□□ -1.79
UBP12YJL197W CRF1Q04930 467 aa3.86□□□□□ -1.79
UBP12YJL197W FMP40Q08968 688 aaPredicted RBP3.86□□□□□ -1.79
UBP12YJL197W SGT2Q12118 346 aaKnown RBP3.86□□□□□ -1.79
UBP12YJL197W APN1P22936 367 aa3.86□□□□□ -1.79
UBP12YJL197W WBP1P33767 430 aaKnown RBP3.86□□□□□ -1.79
UBP12YJL197W SRB2P34162 210 aa3.86□□□□□ -1.79
UBP12YJL197W SEF1P34228 1148 aa3.86□□□□□ -1.79
UBP12YJL197W TOS1P38288 455 aa3.86□□□□□ -1.79
UBP12YJL197W YHR097CP38809 366 aaKnown RBP3.86□□□□□ -1.79
UBP12YJL197W SEC24P40482 926 aaKnown RBP3.86□□□□□ -1.79
UBP12YJL197W APT1P49435 187 aaKnown RBP3.86□□□□□ -1.79
UBP12YJL197W YGL036WP53185 909 aaPredicted RBP3.86□□□□□ -1.79
UBP12YJL197W SSY1Q03770 852 aa3.86□□□□□ -1.79
UBP12YJL197W RNH1Q04740 348 aa3.86□□□□□ -1.79
UBP12YJL197W HOF1Q05080 669 aa3.86□□□□□ -1.79
UBP12YJL197W YLR456WQ06199 204 aa3.86□□□□□ -1.79
UBP12YJL197W CDC45Q08032 650 aa3.86□□□□□ -1.79
UBP12YJL197W CHS5Q12114 671 aaKnown RBP3.86□□□□□ -1.79
UBP12YJL197W MDY2Q12285 212 aa3.86□□□□□ -1.79
UBP12YJL197W NTH1P32356 751 aa3.86□□□□□ -1.79
UBP12YJL197W RRT2P38332 387 aa3.86□□□□□ -1.79
UBP12YJL197W MRX1P40050 688 aa3.86□□□□□ -1.79
UBP12YJL197W LYS4P49367 693 aaPredicted RBP3.86□□□□□ -1.79
UBP12YJL197W DCI1Q08558 271 aa3.86□□□□□ -1.79
UBP12YJL197W CYC1P00044 109 aaPredicted RBP3.85□□□□□ -1.79
UBP12YJL197W VMA16P23968 213 aa3.85□□□□□ -1.79
UBP12YJL197W PRD1P25375 712 aa3.85□□□□□ -1.79
UBP12YJL197W MET22P32179 357 aa3.85□□□□□ -1.79
UBP12YJL197W SDH8P38345 138 aa3.85□□□□□ -1.79
UBP12YJL197W SAF1P38352 637 aa3.85□□□□□ -1.79
UBP12YJL197W TMN3P40071 706 aa3.85□□□□□ -1.79
UBP12YJL197W RPN11P43588 306 aaKnown RBP3.85□□□□□ -1.79
UBP12YJL197W STU2P46675 888 aa3.85□□□□□ -1.79
UBP12YJL197W ALT2P52892 507 aa3.85□□□□□ -1.79
UBP12YJL197W SWA2Q06677 668 aa3.85□□□□□ -1.79
UBP12YJL197W PRS5Q12265 496 aaKnown RBP3.85□□□□□ -1.79
UBP12YJL197W NBL1Q3E7Y6 73 aa3.85□□□□□ -1.79
UBP12YJL197W ARD1P07347 238 aaPredicted RBP3.85□□□□□ -1.79
UBP12YJL197W KGD2P19262 463 aaPredicted RBP3.85□□□□□ -1.79
UBP12YJL197W ADH7P25377 361 aa3.85□□□□□ -1.79
UBP12YJL197W PMT1P33775 817 aa3.85□□□□□ -1.79
UBP12YJL197W HCS1P34243 683 aa3.85□□□□□ -1.79
UBP12YJL197W BFR1P38934 470 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms