RNA–Protein interactions for RNA: YER021W

RPN3, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN3, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN3YER021W YPL108WQ02872 168 aaPredicted RBP3.37□□□□□ -1.87
RPN3YER021W RMT2Q03305 412 aa3.37□□□□□ -1.87
RPN3YER021W RAD34Q06665 692 aa3.37□□□□□ -1.87
RPN3YER021W NCP1P16603 691 aaKnown RBP3.36□□□□□ -1.87
RPN3YER021W MAK32P23060 363 aa3.36□□□□□ -1.87
RPN3YER021W CIR1P42940 261 aa3.36□□□□□ -1.87
RPN3YER021W YFR016CP43597 1233 aaKnown RBP3.36□□□□□ -1.87
RPN3YER021W NPA3P47122 385 aa3.36□□□□□ -1.87
RPN3YER021W BPL1P48445 690 aaPredicted RBP3.36□□□□□ -1.87
RPN3YER021W VPS4P52917 437 aa3.36□□□□□ -1.87
RPN3YER021W RBA50Q04418 439 aa3.36□□□□□ -1.87
RPN3YER021W BI2P03873 423 aa3.35□□□□□ -1.87
RPN3YER021W PET122P10355 254 aa3.35□□□□□ -1.87
RPN3YER021W CLB4P24871 460 aa3.35□□□□□ -1.87
RPN3YER021W URK1P27515 501 aa3.35□□□□□ -1.87
RPN3YER021W SIP1P32578 815 aa3.35□□□□□ -1.87
RPN3YER021W BEM3P32873 1128 aa3.35□□□□□ -1.87
RPN3YER021W RPF2P36160 344 aaKnown RBP3.35□□□□□ -1.87
RPN3YER021W FTH1P38310 465 aa3.35□□□□□ -1.87
RPN3YER021W VBA2P38358 474 aaKnown RBP3.35□□□□□ -1.87
RPN3YER021W IMD2P38697 523 aaKnown RBP3.35□□□□□ -1.87
RPN3YER021W FSH1P38777 243 aaKnown RBP3.35□□□□□ -1.87
RPN3YER021W XBP1P40489 647 aa3.35□□□□□ -1.87
RPN3YER021W NMD5P46970 1048 aa3.35□□□□□ -1.87
RPN3YER021W BNA3P47039 444 aaKnown RBP3.35□□□□□ -1.87
RPN3YER021W IMD3P50095 523 aaKnown RBP3.35□□□□□ -1.87
RPN3YER021W ORM2Q06144 216 aa3.35□□□□□ -1.87
RPN3YER021W YPL191CQ08930 360 aa3.35□□□□□ -1.87
RPN3YER021W YPR117WQ06116 2489 aa3.35□□□□□ -1.87
RPN3YER021W HSP104P31539 908 aaKnown RBP3.34□□□□□ -1.87
RPN3YER021W BUD16P39988 312 aa3.34□□□□□ -1.87
RPN3YER021W ERR3P42222 437 aa3.34□□□□□ -1.87
RPN3YER021W YGR079WP53249 370 aa3.34□□□□□ -1.87
RPN3YER021W ARC35P53731 342 aaKnown RBP3.34□□□□□ -1.87
RPN3YER021W YAT1P80235 687 aa3.34□□□□□ -1.87
RPN3YER021W YPL071CQ02864 156 aa3.34□□□□□ -1.87
RPN3YER021W TPO3Q06451 622 aa3.34□□□□□ -1.87
RPN3YER021W PRS5Q12265 496 aaKnown RBP3.34□□□□□ -1.87
RPN3YER021W DBF20P32328 564 aa3.34□□□□□ -1.88
RPN3YER021W STV1P37296 890 aa3.34□□□□□ -1.88
RPN3YER021W IES5P40060 125 aa3.34□□□□□ -1.88
RPN3YER021W LTP1P40347 161 aa3.34□□□□□ -1.88
RPN3YER021W UBP7P40453 1071 aa3.34□□□□□ -1.88
RPN3YER021W AAT1Q01802 451 aa3.34□□□□□ -1.88
RPN3YER021W RSC9Q03124 581 aa3.34□□□□□ -1.88
RPN3YER021W TRS130Q03660 1102 aa3.34□□□□□ -1.88
RPN3YER021W GTB1Q04924 702 aa3.34□□□□□ -1.88
RPN3YER021W LYS21Q12122 440 aaKnown RBP3.34□□□□□ -1.88
RPN3YER021W RVB2Q12464 471 aaKnown RBP3.34□□□□□ -1.88
RPN3YER021W LYS2P07702 1392 aa3.33□□□□□ -1.88
RPN3YER021W CET1O13297 549 aaPredicted RBP3.33□□□□□ -1.88
RPN3YER021W COX1P00401 534 aa3.33□□□□□ -1.88
RPN3YER021W URE2P23202 354 aaKnown RBP3.33□□□□□ -1.88
RPN3YER021W YCL049CP25577 312 aa3.33□□□□□ -1.88
RPN3YER021W SWC3P31376 625 aa3.33□□□□□ -1.88
RPN3YER021W GSH1P32477 678 aa3.33□□□□□ -1.88
RPN3YER021W HES1P35843 434 aa3.33□□□□□ -1.88
RPN3YER021W ERV46P39727 415 aa3.33□□□□□ -1.88
RPN3YER021W ULP2P40537 1034 aaPredicted RBP3.33□□□□□ -1.88
RPN3YER021W CIN1P40987 1014 aa3.33□□□□□ -1.88
RPN3YER021W ZAP1P47043 880 aa3.33□□□□□ -1.88
RPN3YER021W YGL082WP53155 381 aa3.33□□□□□ -1.88
RPN3YER021W RTS3P53289 263 aa3.33□□□□□ -1.88
RPN3YER021W YNL058CP53947 316 aa3.33□□□□□ -1.88
RPN3YER021W STP3Q05937 343 aa3.33□□□□□ -1.88
RPN3YER021W AUS1Q08409 1394 aa3.33□□□□□ -1.88
RPN3YER021W LAC1P28496 418 aa3.32□□□□□ -1.88
RPN3YER021W FUN12P39730 1002 aaKnown RBP3.32□□□□□ -1.88
RPN3YER021W SNO3P43544 222 aa3.32□□□□□ -1.88
RPN3YER021W IDP3P53982 420 aaKnown RBP3.32□□□□□ -1.88
RPN3YER021W MTG1Q03151 367 aaPredicted RBP3.32□□□□□ -1.88
RPN3YER021W SNU56Q03782 492 aaKnown RBP3.32□□□□□ -1.88
RPN3YER021W BLS1Q06071 122 aa3.32□□□□□ -1.88
RPN3YER021W VAM6Q07468 1049 aa3.32□□□□□ -1.88
RPN3YER021W YOR389WQ08912 624 aa3.32□□□□□ -1.88
RPN3YER021W RRG1Q12167 365 aaPredicted RBP3.32□□□□□ -1.88
RPN3YER021W CBP1P07252 654 aa3.31□□□□□ -1.88
RPN3YER021W YMR085WP0CF18 432 aa3.31□□□□□ -1.88
RPN3YER021W MTF2P10849 440 aa3.31□□□□□ -1.88
RPN3YER021W PTC6P25646 442 aa3.31□□□□□ -1.88
RPN3YER021W GCD7P32502 381 aaPredicted RBP3.31□□□□□ -1.88
RPN3YER021W PSF2P40359 213 aa3.31□□□□□ -1.88
RPN3YER021W SKP2P42843 763 aa3.31□□□□□ -1.88
RPN3YER021W IRC7P43623 340 aa3.31□□□□□ -1.88
RPN3YER021W SYF1Q04048 859 aaPredicted RBP3.31□□□□□ -1.88
RPN3YER021W TFC6Q06339 672 aa3.31□□□□□ -1.88
RPN3YER021W FLO1P32768 1537 aa3.31□□□□□ -1.88
RPN3YER021W ILV2P07342 687 aaKnown RBP3.3□□□□□ -1.88
RPN3YER021W YML003WP0CF16 290 aa3.3□□□□□ -1.88
RPN3YER021W PTP1P25044 335 aa3.3□□□□□ -1.88
RPN3YER021W SSK22P25390 1331 aaPredicted RBP3.3□□□□□ -1.88
RPN3YER021W VPS24P36095 224 aaKnown RBP3.3□□□□□ -1.88
RPN3YER021W GEX2P36173 615 aa3.3□□□□□ -1.88
RPN3YER021W IFA38P38286 347 aa3.3□□□□□ -1.88
RPN3YER021W NPR3P38742 1146 aa3.3□□□□□ -1.88
RPN3YER021W FAF1P40546 346 aaPredicted RBP3.3□□□□□ -1.88
RPN3YER021W SAP185P40856 1058 aa3.3□□□□□ -1.88
RPN3YER021W PSA1P41940 361 aaKnown RBP3.3□□□□□ -1.88
RPN3YER021W NET1P47035 1189 aa3.3□□□□□ -1.88
RPN3YER021W MSY1P48527 492 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms