RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W ECM22Q05958 814 aaPredicted RBP2.51□□□□□ -2.01
VPS52YDR484W PIG1Q06216 648 aa2.51□□□□□ -2.01
VPS52YDR484W TFC6Q06339 672 aa2.51□□□□□ -2.01
VPS52YDR484W NUS1Q12063 375 aa2.51□□□□□ -2.01
VPS52YDR484W PCD1Q12524 340 aa2.51□□□□□ -2.01
VPS52YDR484W GAL4P04386 881 aa2.5□□□□□ -2.01
VPS52YDR484W SRP54P20424 541 aaKnown RBP2.5□□□□□ -2.01
VPS52YDR484W SLC1P33333 303 aa2.5□□□□□ -2.01
VPS52YDR484W ADE17P38009 592 aaKnown RBP2.5□□□□□ -2.01
VPS52YDR484W SEC31P38968 1273 aaKnown RBP2.5□□□□□ -2.01
VPS52YDR484W PFK26P40433 827 aaKnown RBP2.5□□□□□ -2.01
VPS52YDR484W ECM16Q04217 1267 aaKnown RBP2.5□□□□□ -2.01
VPS52YDR484W TDA9Q04545 1251 aa2.5□□□□□ -2.01
VPS52YDR484W YLR455WQ06188 304 aa2.5□□□□□ -2.01
VPS52YDR484W GEP3Q08622 556 aa2.5□□□□□ -2.01
VPS52YDR484W HER1Q12276 1246 aa2.5□□□□□ -2.01
VPS52YDR484W YLR302CO13544 120 aa2.5□□□□□ -2.01
VPS52YDR484W SNF1P06782 633 aaKnown RBP2.5□□□□□ -2.01
VPS52YDR484W AIM17P23180 465 aaKnown RBP2.5□□□□□ -2.01
VPS52YDR484W NTR2P36118 322 aaPredicted RBP2.5□□□□□ -2.01
VPS52YDR484W MEP2P41948 499 aa2.5□□□□□ -2.01
VPS52YDR484W RPN11P43588 306 aaKnown RBP2.5□□□□□ -2.01
VPS52YDR484W VPS25P47142 202 aa2.5□□□□□ -2.01
VPS52YDR484W YPT11P48559 417 aa2.5□□□□□ -2.01
VPS52YDR484W VPS4P52917 437 aa2.5□□□□□ -2.01
VPS52YDR484W RPL15BP54780 204 aaPredicted RBP2.5□□□□□ -2.01
VPS52YDR484W VID22Q05934 901 aa2.5□□□□□ -2.01
VPS52YDR484W NBP2Q12163 236 aa2.5□□□□□ -2.01
VPS52YDR484W NOP1P15646 327 aaKnown RBP2.49□□□□□ -2.01
VPS52YDR484W TRX2P22803 104 aaKnown RBP2.49□□□□□ -2.01
VPS52YDR484W UBP13P38187 747 aa2.49□□□□□ -2.01
VPS52YDR484W YIR016WP40572 265 aa2.49□□□□□ -2.01
VPS52YDR484W MDV1P47025 714 aa2.49□□□□□ -2.01
VPS52YDR484W EAF7P53911 425 aaKnown RBP2.49□□□□□ -2.01
VPS52YDR484W REG1Q00816 1014 aa2.49□□□□□ -2.01
VPS52YDR484W RSM28Q03430 361 aa2.49□□□□□ -2.01
VPS52YDR484W TRM8Q12009 286 aa2.49□□□□□ -2.01
VPS52YDR484W VCX1Q99385 411 aa2.49□□□□□ -2.01
VPS52YDR484W GPA1P08539 472 aa2.48□□□□□ -2.01
VPS52YDR484W VPS41P38959 992 aa2.48□□□□□ -2.01
VPS52YDR484W SWP82P43554 623 aa2.48□□□□□ -2.01
VPS52YDR484W CTK2P46962 323 aa2.48□□□□□ -2.01
VPS52YDR484W BNA1P47096 177 aa2.48□□□□□ -2.01
VPS52YDR484W RRT6P53117 311 aaPredicted RBP2.48□□□□□ -2.01
VPS52YDR484W IST1P53843 298 aaPredicted RBP2.48□□□□□ -2.01
VPS52YDR484W BOP3P53958 396 aa2.48□□□□□ -2.01
VPS52YDR484W YPL068CQ02749 293 aa2.48□□□□□ -2.01
VPS52YDR484W YML131WQ03102 365 aa2.48□□□□□ -2.01
VPS52YDR484W NEW1Q08972 1196 aaKnown RBP2.48□□□□□ -2.01
VPS52YDR484W UBX3Q12229 455 aa2.48□□□□□ -2.01
VPS52YDR484W ERG8P24521 451 aa2.48□□□□□ -2.01
VPS52YDR484W YCP4P25349 247 aaKnown RBP2.48□□□□□ -2.01
VPS52YDR484W RER1P25560 188 aa2.48□□□□□ -2.01
VPS52YDR484W RRN3P36070 627 aa2.48□□□□□ -2.01
VPS52YDR484W ECM10P39987 644 aa2.48□□□□□ -2.01
VPS52YDR484W YER010CP40011 234 aa2.48□□□□□ -2.01
VPS52YDR484W PFA5Q03289 374 aa2.48□□□□□ -2.01
VPS52YDR484W RCO1Q04779 684 aa2.48□□□□□ -2.01
VPS52YDR484W POS5Q06892 414 aa2.48□□□□□ -2.01
VPS52YDR484W GSH2Q08220 491 aa2.48□□□□□ -2.01
VPS52YDR484W FRE3Q08905 711 aa2.48□□□□□ -2.01
VPS52YDR484W HXK2P04807 486 aaKnown RBP2.47□□□□□ -2.01
VPS52YDR484W PET111P08468 800 aa2.47□□□□□ -2.01
VPS52YDR484W RAP1P11938 827 aa2.47□□□□□ -2.01
VPS52YDR484W PXL1P36166 706 aa2.47□□□□□ -2.01
VPS52YDR484W IRC8P47046 822 aa2.47□□□□□ -2.01
VPS52YDR484W YGL036WP53185 909 aaPredicted RBP2.47□□□□□ -2.01
VPS52YDR484W CAC2Q04199 468 aa2.47□□□□□ -2.01
VPS52YDR484W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
VPS52YDR484W YER145C-AA0A023PYF4 145 aa2.46□□□□□ -2.02
VPS52YDR484W RPB2P08518 1224 aaKnown RBP2.46□□□□□ -2.02
VPS52YDR484W KRS1P15180 591 aaKnown RBP2.46□□□□□ -2.02
VPS52YDR484W GUK1P15454 187 aaKnown RBP2.46□□□□□ -2.02
VPS52YDR484W TKL1P23254 680 aaKnown RBP2.46□□□□□ -2.02
VPS52YDR484W STE50P25344 346 aa2.46□□□□□ -2.02
VPS52YDR484W SAC1P32368 623 aaKnown RBP2.46□□□□□ -2.02
VPS52YDR484W ESL2P36168 1195 aa2.46□□□□□ -2.02
VPS52YDR484W IME4P41833 600 aa2.46□□□□□ -2.02
VPS52YDR484W MUB1Q03162 620 aa2.46□□□□□ -2.02
VPS52YDR484W ECI1Q05871 280 aa2.46□□□□□ -2.02
VPS52YDR484W PSK2Q08217 1101 aa2.46□□□□□ -2.02
VPS52YDR484W YOR019WQ99248 730 aa2.46□□□□□ -2.02
VPS52YDR484W YBR085C-AO43137 85 aa2.46□□□□□ -2.02
VPS52YDR484W YPT1P01123 206 aaKnown RBP2.46□□□□□ -2.02
VPS52YDR484W CHO1P08456 276 aa2.46□□□□□ -2.02
VPS52YDR484W SSH4P32343 579 aa2.46□□□□□ -2.02
VPS52YDR484W MRP20P32387 263 aa2.46□□□□□ -2.02
VPS52YDR484W CBF2P32504 956 aa2.46□□□□□ -2.02
VPS52YDR484W ATO2P32907 282 aa2.46□□□□□ -2.02
VPS52YDR484W GND1P38720 489 aaKnown RBP2.46□□□□□ -2.02
VPS52YDR484W AXL2P38928 823 aa2.46□□□□□ -2.02
VPS52YDR484W PSD1P39006 500 aa2.46□□□□□ -2.02
VPS52YDR484W PKP1P40530 394 aa2.46□□□□□ -2.02
VPS52YDR484W SMC3P47037 1230 aa2.46□□□□□ -2.02
VPS52YDR484W LYS20P48570 428 aaKnown RBP2.46□□□□□ -2.02
VPS52YDR484W YMR018WQ04364 514 aa2.46□□□□□ -2.02
VPS52YDR484W SNO4Q04902 237 aa2.46□□□□□ -2.02
VPS52YDR484W OPY2Q06810 360 aa2.46□□□□□ -2.02
VPS52YDR484W SSP2Q08646 371 aa2.46□□□□□ -2.02
VPS52YDR484W GPN2Q08726 347 aaPredicted RBP2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms