RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	TFC3	P34111	1160 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	TPA1	P40032	644 aa	Known RBP	2.43	□□□□□ -2.02
NCL1	YBL024W	SEC24	P40482	926 aa	Known RBP	2.43	□□□□□ -2.02
NCL1	YBL024W	RMD8	P43620	662 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	UBX6	P47049	396 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	MRX6	P48564	524 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	TAF11	Q04226	346 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	SWA2	Q06677	668 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	BAG7	Q12128	409 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	NMD4	Q12129	218 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	RPL7B	Q12213	244 aa	Known RBP	2.43	□□□□□ -2.02
NCL1	YBL024W	SRP54	P20424	541 aa	Known RBP	2.43	□□□□□ -2.02
NCL1	YBL024W	AAD3	P25612	363 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	YMC1	P32331	307 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	NOP4	P37838	685 aa	Known RBP	2.43	□□□□□ -2.02
NCL1	YBL024W	RTS1	P38903	757 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	EXO1	P39875	702 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	TDA10	P42938	290 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	SGM1	P47166	707 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	VPS75	P53853	264 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	MRPL19	P53875	158 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	FCP1	Q03254	732 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	SEG1	Q04279	960 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	SKG3	Q06315	1026 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	YPL191C	Q08930	360 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	ULA1	Q12059	462 aa		2.43	□□□□□ -2.02
NCL1	YBL024W	RTC1	Q08281	1341 aa		2.42	□□□□□ -2.02
NCL1	YBL024W	YBR085C-A	O43137	85 aa		2.42	□□□□□ -2.02
NCL1	YBL024W	SEC53	P07283	254 aa	Known RBP	2.42	□□□□□ -2.02
NCL1	YBL024W	ERG11	P10614	530 aa		2.42	□□□□□ -2.02
NCL1	YBL024W	PRE8	P23639	250 aa		2.42	□□□□□ -2.02
NCL1	YBL024W	POL4	P25615	582 aa		2.42	□□□□□ -2.02
NCL1	YBL024W	NTR2	P36118	322 aa	Predicted RBP	2.42	□□□□□ -2.02
NCL1	YBL024W	MAL33	P38157	468 aa		2.42	□□□□□ -2.02
NCL1	YBL024W	YBL029W	P38201	376 aa		2.42	□□□□□ -2.02
NCL1	YBL024W	FLC2	P39719	783 aa		2.42	□□□□□ -2.02
NCL1	YBL024W	LCL3	P53153	274 aa		2.42	□□□□□ -2.02
NCL1	YBL024W	YAT1	P80235	687 aa		2.42	□□□□□ -2.02
NCL1	YBL024W	RIM13	Q03792	727 aa		2.42	□□□□□ -2.02
NCL1	YBL024W	ARP9	Q05123	467 aa		2.42	□□□□□ -2.02
NCL1	YBL024W	CYK3	Q07533	885 aa		2.42	□□□□□ -2.02
NCL1	YBL024W	OSW1	Q08692	278 aa		2.42	□□□□□ -2.02
NCL1	YBL024W	CTI6	Q08923	506 aa		2.42	□□□□□ -2.02
NCL1	YBL024W	NOP58	Q12499	511 aa	Known RBP	2.42	□□□□□ -2.02
NCL1	YBL024W	GCN4	P03069	281 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	ARG3	P05150	338 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	KES1	P35844	434 aa	Known RBP	2.41	□□□□□ -2.02
NCL1	YBL024W	UTP21	Q06078	939 aa	Predicted RBP	2.41	□□□□□ -2.02
NCL1	YBL024W	ERP4	Q12450	207 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	SPE4	Q12455	300 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	HSH49	Q99181	213 aa	Predicted RBP	2.41	□□□□□ -2.02
NCL1	YBL024W	AQY1	P0CD91	305 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	PTP1	P25044	335 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	PGS1	P25578	521 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	PTC6	P25646	442 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	GSH1	P32477	678 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	AUR1	P36107	401 aa	Predicted RBP	2.41	□□□□□ -2.02
NCL1	YBL024W	AAP1	P37898	856 aa	Known RBP	2.41	□□□□□ -2.02
NCL1	YBL024W	UBP13	P38187	747 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	RKM3	P38222	552 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	SPO22	P40511	975 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	VTC2	P43585	828 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	GLO1	P50107	326 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	DCP2	P53550	970 aa	Known RBP	2.41	□□□□□ -2.02
NCL1	YBL024W	SEC5	P89102	971 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	YPL071C	Q02864	156 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	INA17	Q02888	182 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	YLR287C	Q05881	355 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	RAD34	Q06665	692 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	YPL272C	Q08984	517 aa		2.41	□□□□□ -2.02
NCL1	YBL024W	PGA3	Q12746	312 aa	Known RBP	2.41	□□□□□ -2.02
NCL1	YBL024W	MET17	P06106	444 aa		2.4	□□□□□ -2.02
NCL1	YBL024W	CKA1	P15790	372 aa		2.4	□□□□□ -2.02
NCL1	YBL024W	NUP1	P20676	1076 aa		2.4	□□□□□ -2.02
NCL1	YBL024W	CDC15	P27636	974 aa		2.4	□□□□□ -2.02
NCL1	YBL024W	PEP3	P27801	918 aa		2.4	□□□□□ -2.02
NCL1	YBL024W	ADE17	P38009	592 aa	Known RBP	2.4	□□□□□ -2.02
NCL1	YBL024W	MNN2	P38069	597 aa		2.4	□□□□□ -2.02
NCL1	YBL024W	SEC31	P38968	1273 aa	Known RBP	2.4	□□□□□ -2.02
NCL1	YBL024W	PHM8	P40025	321 aa		2.4	□□□□□ -2.02
NCL1	YBL024W	RGI2	P40188	164 aa		2.4	□□□□□ -2.02
NCL1	YBL024W	OPT1	P40897	799 aa		2.4	□□□□□ -2.02
NCL1	YBL024W	SAE2	P46946	345 aa		2.4	□□□□□ -2.02
NCL1	YBL024W	YRB30	P53107	440 aa	Predicted RBP	2.4	□□□□□ -2.02
NCL1	YBL024W	YPR003C	P53394	754 aa		2.4	□□□□□ -2.02
NCL1	YBL024W	AAT1	Q01802	451 aa		2.4	□□□□□ -2.02
NCL1	YBL024W	RSM28	Q03430	361 aa		2.4	□□□□□ -2.02
NCL1	YBL024W	SYF1	Q04048	859 aa	Predicted RBP	2.4	□□□□□ -2.02
NCL1	YBL024W	TCO89	Q08921	799 aa		2.4	□□□□□ -2.02
NCL1	YBL024W	LEA1	Q08963	238 aa	Predicted RBP	2.4	□□□□□ -2.02
NCL1	YBL024W	RCN2	Q12044	265 aa		2.4	□□□□□ -2.02
NCL1	YBL024W	LYS21	Q12122	440 aa	Known RBP	2.4	□□□□□ -2.02
NCL1	YBL024W	SCM3	Q12334	223 aa		2.4	□□□□□ -2.02
NCL1	YBL024W	YMR084W	A2P2R3	262 aa		2.4	□□□□□ -2.03
NCL1	YBL024W	ILV2	P07342	687 aa	Known RBP	2.4	□□□□□ -2.03
NCL1	YBL024W	PET111	P08468	800 aa		2.4	□□□□□ -2.03
NCL1	YBL024W	HEM1	P09950	548 aa	Predicted RBP	2.4	□□□□□ -2.03
NCL1	YBL024W	CBS1	P14066	229 aa		2.4	□□□□□ -2.03
NCL1	YBL024W	PWP1	P21304	576 aa	Known RBP	2.4	□□□□□ -2.03
NCL1	YBL024W	PDB1	P32473	366 aa	Known RBP	2.4	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms