RNA–Protein interactions for RNA: YPR052C

NHP6A, Transcript of High-mobility group (HMG) protein, yeast

Gene NHP6A, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHP6A	YPR052C	STL1	P39932	569 aa		4.93	□□□□□ -1.62
NHP6A	YPR052C	CDC1	P40986	491 aa		4.93	□□□□□ -1.62
NHP6A	YPR052C	YFL012W	P43580	148 aa		4.93	□□□□□ -1.62
NHP6A	YPR052C	TAF6	P53040	516 aa		4.93	□□□□□ -1.62
NHP6A	YPR052C	PEX31	P53203	462 aa		4.93	□□□□□ -1.62
NHP6A	YPR052C	YGR266W	P53326	701 aa		4.93	□□□□□ -1.62
NHP6A	YPR052C	KTR6	P54070	446 aa		4.93	□□□□□ -1.62
NHP6A	YPR052C	NAM8	Q00539	523 aa	Known RBP	4.93	□□□□□ -1.62
NHP6A	YPR052C	SLT2	Q00772	484 aa		4.93	□□□□□ -1.62
NHP6A	YPR052C	SND1	Q04007	877 aa		4.93	□□□□□ -1.62
NHP6A	YPR052C	YLR456W	Q06199	204 aa		4.93	□□□□□ -1.62
NHP6A	YPR052C	PMT7	Q06644	662 aa		4.93	□□□□□ -1.62
NHP6A	YPR052C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
NHP6A	YPR052C	SLP1	Q12232	587 aa		4.93	□□□□□ -1.62
NHP6A	YPR052C	ERR1	P0CX10	437 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	ERR2	P0CX11	437 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	POL30	P15873	258 aa	Known RBP	4.92	□□□□□ -1.62
NHP6A	YPR052C	AAD3	P25612	363 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	MVD1	P32377	396 aa	Known RBP	4.92	□□□□□ -1.62
NHP6A	YPR052C	PXA2	P34230	853 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	OTU2	P38747	307 aa	Known RBP	4.92	□□□□□ -1.62
NHP6A	YPR052C	YHR078W	P38799	552 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	EXO1	P39875	702 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	ATM1	P40416	690 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	ERR3	P42222	437 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	MNN11	P46985	422 aa	Known RBP	4.92	□□□□□ -1.62
NHP6A	YPR052C	TMA22	P47089	198 aa	Predicted RBP	4.92	□□□□□ -1.62
NHP6A	YPR052C	PAN2	P53010	1115 aa	Predicted RBP	4.92	□□□□□ -1.62
NHP6A	YPR052C	VPS9	P54787	451 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	YPL109C	Q02981	657 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	ADI1	Q03677	179 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	YMR206W	Q03695	313 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	ARA2	Q04212	335 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	SPC24	Q04477	213 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	AIM32	Q04689	311 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	HEL2	Q05580	639 aa	Known RBP	4.92	□□□□□ -1.62
NHP6A	YPR052C	HRD3	Q05787	833 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	ECM38	Q05902	660 aa	Predicted RBP	4.92	□□□□□ -1.62
NHP6A	YPR052C	YLR177W	Q06251	628 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	AAD4	Q07747	329 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	NRT1	Q08485	598 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	EFG1	Q3E705	233 aa	Known RBP	4.92	□□□□□ -1.62
NHP6A	YPR052C	YEL077C	Q3E7X8	1277 aa		4.92	□□□□□ -1.62
NHP6A	YPR052C	GPA2	P10823	449 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	GAL11	P19659	1081 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	CHL1	P22516	861 aa	Predicted RBP	4.91	□□□□□ -1.62
NHP6A	YPR052C	AMS1	P22855	1083 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	BRF1	P29056	596 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	URA10	P30402	227 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	MLS1	P30952	554 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	FSH1	P38777	243 aa	Known RBP	4.91	□□□□□ -1.62
NHP6A	YPR052C	ERP5	P38819	212 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	PRM9	P39551	298 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	YAT2	P40017	923 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	TIF34	P40217	347 aa	Known RBP	4.91	□□□□□ -1.62
NHP6A	YPR052C	YNL144C	P53907	740 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	GTR1	Q00582	310 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	SLU7	Q02775	382 aa	Known RBP	4.91	□□□□□ -1.62
NHP6A	YPR052C	RNY1	Q02933	434 aa	Known RBP	4.91	□□□□□ -1.62
NHP6A	YPR052C	SPG3	Q04398	127 aa	Predicted RBP	4.91	□□□□□ -1.62
NHP6A	YPR052C	ARP9	Q05123	467 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	YDL073W	Q07454	984 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	ALR1	Q08269	859 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	OSW1	Q08692	278 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
NHP6A	YPR052C	ARP7	Q12406	477 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	YPT6	Q99260	215 aa		4.91	□□□□□ -1.62
NHP6A	YPR052C	CCP1	P00431	361 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	MET16	P18408	261 aa	Predicted RBP	4.9	□□□□□ -1.63
NHP6A	YPR052C	ARF2	P19146	181 aa	Known RBP	4.9	□□□□□ -1.63
NHP6A	YPR052C	YCL068C	P25593	260 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	YIH1	P25637	258 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	YJU3	P28321	313 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	RML2	P32611	393 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	YSC84	P32793	468 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	MRE11	P32829	692 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	CYM1	P32898	989 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	SRP101	P32916	621 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	YKL151C	P36059	337 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	LAM1	P38851	1228 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	PFS1	P38872	237 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	YDR089W	P38966	869 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	SSP120	P39931	234 aa	Known RBP	4.9	□□□□□ -1.63
NHP6A	YPR052C	YEL028W	P39989	153 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	PEP8	P40335	379 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	YPS6	P40583	537 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	BST1	P43571	1029 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	RTT101	P47050	842 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	CCT8	P47079	568 aa	Known RBP	4.9	□□□□□ -1.63
NHP6A	YPR052C	PRP24	P49960	444 aa	Known RBP	4.9	□□□□□ -1.63
NHP6A	YPR052C	MNN10	P50108	393 aa	Known RBP	4.9	□□□□□ -1.63
NHP6A	YPR052C	HST2	P53686	357 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	PIR3	Q03180	325 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	AAD15	Q08361	143 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	SLD7	Q08457	257 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	HOS1	Q12214	470 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	SPE4	Q12455	300 aa		4.9	□□□□□ -1.63
NHP6A	YPR052C	TEC1	P18412	486 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	SNF5	P18480	905 aa		4.89	□□□□□ -1.63
NHP6A	YPR052C	VAN1	P23642	535 aa		4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms