RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL1	YPL008W	THI21	Q08975	551 aa		4.11	□□□□□ -1.75
CHL1	YPL008W	YMR085W	P0CF18	432 aa		4.11	□□□□□ -1.75
CHL1	YPL008W	FUS1	P11710	512 aa		4.11	□□□□□ -1.75
CHL1	YPL008W	VPS3	P23643	1011 aa		4.11	□□□□□ -1.75
CHL1	YPL008W	PRR1	P28708	518 aa		4.11	□□□□□ -1.75
CHL1	YPL008W	SFP1	P32432	683 aa		4.11	□□□□□ -1.75
CHL1	YPL008W	RIM1	P32445	135 aa	Known RBP	4.11	□□□□□ -1.75
CHL1	YPL008W	PDB1	P32473	366 aa	Known RBP	4.11	□□□□□ -1.75
CHL1	YPL008W	BCS1	P32839	456 aa		4.11	□□□□□ -1.75
CHL1	YPL008W	CBR1	P38626	284 aa	Known RBP	4.11	□□□□□ -1.75
CHL1	YPL008W	HXT6	P39003	570 aa	Known RBP	4.11	□□□□□ -1.75
CHL1	YPL008W	HXT7	P39004	570 aa		4.11	□□□□□ -1.75
CHL1	YPL008W	YER186C	P40101	306 aa		4.11	□□□□□ -1.75
CHL1	YPL008W	TAF1	P46677	1066 aa		4.11	□□□□□ -1.75
CHL1	YPL008W	YJL045W	P47052	634 aa		4.11	□□□□□ -1.75
CHL1	YPL008W	HXT16	P47185	567 aa		4.11	□□□□□ -1.75
CHL1	YPL008W	RFX1	P48743	811 aa		4.11	□□□□□ -1.75
CHL1	YPL008W	YNL134C	P53912	376 aa	Known RBP	4.11	□□□□□ -1.75
CHL1	YPL008W	VPS9	P54787	451 aa		4.11	□□□□□ -1.75
CHL1	YPL008W	CEG1	Q01159	459 aa	Predicted RBP	4.11	□□□□□ -1.75
CHL1	YPL008W	YOR059C	Q08448	450 aa	Known RBP	4.11	□□□□□ -1.75
CHL1	YPL008W	GPN2	Q08726	347 aa	Predicted RBP	4.11	□□□□□ -1.75
CHL1	YPL008W	YPR071W	Q12346	211 aa		4.11	□□□□□ -1.75
CHL1	YPL008W	RTP1	Q12751	981 aa		4.11	□□□□□ -1.75
CHL1	YPL008W	RAD10	P06838	210 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	RPS21A	P0C0V8	87 aa	Known RBP	4.1	□□□□□ -1.75
CHL1	YPL008W	DBF20	P32328	564 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	FLR1	P38124	548 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	KSP1	P38691	1029 aa	Known RBP	4.1	□□□□□ -1.75
CHL1	YPL008W	SMF2	P38778	549 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	FLC2	P39719	783 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	SAW1	P39735	261 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	SSP120	P39931	234 aa	Known RBP	4.1	□□□□□ -1.75
CHL1	YPL008W	ALD5	P40047	520 aa	Known RBP	4.1	□□□□□ -1.75
CHL1	YPL008W	FAF1	P40546	346 aa	Predicted RBP	4.1	□□□□□ -1.75
CHL1	YPL008W	INP51	P40559	946 aa	Known RBP	4.1	□□□□□ -1.75
CHL1	YPL008W	ALA1	P40825	983 aa	Known RBP	4.1	□□□□□ -1.75
CHL1	YPL008W	TMA22	P47089	198 aa	Predicted RBP	4.1	□□□□□ -1.75
CHL1	YPL008W	DAK1	P54838	584 aa	Known RBP	4.1	□□□□□ -1.75
CHL1	YPL008W	RKM2	Q03942	479 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	CUE5	Q08412	411 aa	Known RBP	4.1	□□□□□ -1.75
CHL1	YPL008W	SPE4	Q12455	300 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	ZPS1	Q12512	249 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	ATG11	Q12527	1178 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	CHS1	P08004	1131 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	SAT4	P25333	603 aa	Known RBP	4.1	□□□□□ -1.75
CHL1	YPL008W	HEM12	P32347	362 aa	Predicted RBP	4.1	□□□□□ -1.75
CHL1	YPL008W	YBR032W	P38223	100 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	YFL054C	P43549	646 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	YJL132W	P47014	750 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	YML131W	Q03102	365 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	RCF1	Q03713	159 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	YDR278C	Q05612	105 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	GRX8	Q05926	109 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	THI20	Q08224	551 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	AAD15	Q08361	143 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	RRP36	Q12481	300 aa	Predicted RBP	4.1	□□□□□ -1.75
CHL1	YPL008W	CTF3	Q12748	733 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	YPT6	Q99260	215 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	IZH4	Q99393	312 aa		4.1	□□□□□ -1.75
CHL1	YPL008W	COX4	P04037	155 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	PRP4	P20053	465 aa	Known RBP	4.09	□□□□□ -1.75
CHL1	YPL008W	ARG1	P22768	420 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	RAD51	P25454	400 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	FUB1	P25659	250 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	FRE1	P32791	686 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	YBR062C	P38239	180 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	AIM18	P38884	321 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	AIR1	P40507	360 aa	Known RBP	4.09	□□□□□ -1.75
CHL1	YPL008W	SEC28	P40509	296 aa	Known RBP	4.09	□□□□□ -1.75
CHL1	YPL008W	AAD14	P42884	376 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	CNN1	P43618	361 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	PPT1	P53043	513 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	YGR283C	P53336	341 aa	Predicted RBP	4.09	□□□□□ -1.75
CHL1	YPL008W	ECM9	Q02202	377 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	ENT2	Q05785	613 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	ADY3	Q07732	790 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	DIS3	Q08162	1001 aa	Known RBP	4.09	□□□□□ -1.75
CHL1	YPL008W	YIG1	Q08956	461 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
CHL1	YPL008W	SSC1	P0CS90	654 aa	Known RBP	4.09	□□□□□ -1.75
CHL1	YPL008W	EXO70	P19658	623 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	AMS1	P22855	1083 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	GAC1	P28006	793 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	URA10	P30402	227 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	MVD1	P32377	396 aa	Known RBP	4.09	□□□□□ -1.75
CHL1	YPL008W	SSE1	P32589	693 aa	Known RBP	4.09	□□□□□ -1.75
CHL1	YPL008W	STE13	P33894	931 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	ETR1	P38071	380 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	DSS1	P39112	969 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	PRM9	P39551	298 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	LSB6	P42951	607 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	BFA1	P47113	574 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	AIM14	P53109	570 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	NNF2	P53253	936 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	TAF11	Q04226	346 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	ADE13	Q05911	482 aa	Known RBP	4.09	□□□□□ -1.75
CHL1	YPL008W	YLR257W	Q06146	321 aa	Known RBP	4.09	□□□□□ -1.75
CHL1	YPL008W	AAD4	Q07747	329 aa		4.09	□□□□□ -1.75
CHL1	YPL008W	PEX15	Q08215	383 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms