RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C TRS130Q03660 1102 aa5.06□□□□□ -1.6
CCS1YMR038C MTQ2Q03920 221 aaPredicted RBP5.06□□□□□ -1.6
CCS1YMR038C ECM7Q06200 448 aa5.06□□□□□ -1.6
CCS1YMR038C SHS1Q07657 551 aa5.06□□□□□ -1.6
CCS1YMR038C YOL073CQ08232 322 aa5.06□□□□□ -1.6
CCS1YMR038C MPD2Q99316 277 aa5.06□□□□□ -1.6
CCS1YMR038C LAT1P12695 482 aaKnown RBP5.05□□□□□ -1.6
CCS1YMR038C SIR1P21691 654 aa5.05□□□□□ -1.6
CCS1YMR038C PRP19P32523 503 aaKnown RBP5.05□□□□□ -1.6
CCS1YMR038C SSZ1P38788 538 aaKnown RBP5.05□□□□□ -1.6
CCS1YMR038C HOS4P40480 1083 aa5.05□□□□□ -1.6
CCS1YMR038C VTC2P43585 828 aa5.05□□□□□ -1.6
CCS1YMR038C AMA1P50082 593 aa5.05□□□□□ -1.6
CCS1YMR038C ORC5P50874 479 aa5.05□□□□□ -1.6
CCS1YMR038C TOF1P53840 1238 aa5.05□□□□□ -1.6
CCS1YMR038C HMO1Q03973 246 aaKnown RBP5.05□□□□□ -1.6
CCS1YMR038C NBL1Q3E7Y6 73 aa5.05□□□□□ -1.6
CCS1YMR038C PPR1P07272 904 aaPredicted RBP5.04□□□□□ -1.6
CCS1YMR038C ALG1P16661 449 aa5.04□□□□□ -1.6
CCS1YMR038C ERG6P25087 383 aaKnown RBP5.04□□□□□ -1.6
CCS1YMR038C YHL017WP38745 532 aa5.04□□□□□ -1.6
CCS1YMR038C PCF11P39081 626 aaPredicted RBP5.04□□□□□ -1.6
CCS1YMR038C BAP3P41815 604 aa5.04□□□□□ -1.6
CCS1YMR038C PSP1P50896 841 aaKnown RBP5.04□□□□□ -1.6
CCS1YMR038C SPC98P53540 846 aa5.04□□□□□ -1.6
CCS1YMR038C VTC3Q02725 835 aa5.04□□□□□ -1.6
CCS1YMR038C SNU56Q03782 492 aaKnown RBP5.04□□□□□ -1.6
CCS1YMR038C TMN2Q04562 672 aa5.04□□□□□ -1.6
CCS1YMR038C GAD1Q04792 585 aa5.04□□□□□ -1.6
CCS1YMR038C MCM21Q06675 368 aa5.04□□□□□ -1.6
CCS1YMR038C YDL057WQ07379 328 aa5.04□□□□□ -1.6
CCS1YMR038C IRC13Q08630 104 aa5.04□□□□□ -1.6
CCS1YMR038C HRP1Q99383 534 aaKnown RBP5.04□□□□□ -1.6
CCS1YMR038C VPS3P23643 1011 aa5.03□□□□□ -1.6
CCS1YMR038C RPC53P25441 422 aa5.03□□□□□ -1.6
CCS1YMR038C YSC83P32792 385 aa5.03□□□□□ -1.6
CCS1YMR038C TCD2P36101 447 aaKnown RBP5.03□□□□□ -1.6
CCS1YMR038C DUG2P38149 878 aa5.03□□□□□ -1.6
CCS1YMR038C LYS9P38999 446 aa5.03□□□□□ -1.6
CCS1YMR038C CHS6P40955 746 aa5.03□□□□□ -1.6
CCS1YMR038C GPP1P41277 250 aaKnown RBP5.03□□□□□ -1.6
CCS1YMR038C RET2P43621 546 aa5.03□□□□□ -1.6
CCS1YMR038C SET2P46995 733 aaKnown RBP5.03□□□□□ -1.6
CCS1YMR038C YJL163CP46996 555 aa5.03□□□□□ -1.6
CCS1YMR038C YGR237CP50089 785 aa5.03□□□□□ -1.6
CCS1YMR038C UBA2P52488 636 aa5.03□□□□□ -1.6
CCS1YMR038C SLG1P54867 378 aa5.03□□□□□ -1.6
CCS1YMR038C ADA2Q02336 434 aa5.03□□□□□ -1.6
CCS1YMR038C CDD1Q06549 142 aa5.03□□□□□ -1.6
CCS1YMR038C LEA1Q08963 238 aaPredicted RBP5.03□□□□□ -1.6
CCS1YMR038C RNR2P09938 399 aaKnown RBP5.02□□□□□ -1.61
CCS1YMR038C CKA2P19454 339 aa5.02□□□□□ -1.61
CCS1YMR038C ISY1P21374 235 aaPredicted RBP5.02□□□□□ -1.61
CCS1YMR038C GPI10P30777 616 aa5.02□□□□□ -1.61
CCS1YMR038C PPS1P38148 807 aa5.02□□□□□ -1.61
CCS1YMR038C MMS4P38257 691 aa5.02□□□□□ -1.61
CCS1YMR038C SIF2P38262 535 aa5.02□□□□□ -1.61
CCS1YMR038C BEM4P39011 633 aa5.02□□□□□ -1.61
CCS1YMR038C SCD6P45978 349 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
CCS1YMR038C VPS25P47142 202 aa5.02□□□□□ -1.61
CCS1YMR038C NMA2P53204 395 aa5.02□□□□□ -1.61
CCS1YMR038C MTL1P53214 551 aa5.02□□□□□ -1.61
CCS1YMR038C PIL1P53252 339 aaKnown RBP5.02□□□□□ -1.61
CCS1YMR038C RGC1Q06108 1083 aaKnown RBP5.02□□□□□ -1.61
CCS1YMR038C PSK2Q08217 1101 aa5.02□□□□□ -1.61
CCS1YMR038C GCN1P33892 2672 aaKnown RBP5.01□□□□□ -1.61
CCS1YMR038C CPA2P03965 1118 aaKnown RBP5.01□□□□□ -1.61
CCS1YMR038C GAC1P28006 793 aa5.01□□□□□ -1.61
CCS1YMR038C TRZ1P36159 838 aaPredicted RBP5.01□□□□□ -1.61
CCS1YMR038C APT2P36973 181 aa5.01□□□□□ -1.61
CCS1YMR038C TDA3P38758 523 aa5.01□□□□□ -1.61
CCS1YMR038C BCD1P38772 366 aa5.01□□□□□ -1.61
CCS1YMR038C GET2P40056 285 aa5.01□□□□□ -1.61
CCS1YMR038C YNL195CP40168 261 aa5.01□□□□□ -1.61
CCS1YMR038C CCT5P40413 562 aaKnown RBP5.01□□□□□ -1.61
CCS1YMR038C SDS3P40505 327 aa5.01□□□□□ -1.61
CCS1YMR038C THI6P41835 540 aa5.01□□□□□ -1.61
CCS1YMR038C POL31P46957 487 aa5.01□□□□□ -1.61
CCS1YMR038C ASN1P49089 572 aaKnown RBP5.01□□□□□ -1.61
CCS1YMR038C ECM9Q02202 377 aa5.01□□□□□ -1.61
CCS1YMR038C TAF10Q12030 206 aa5.01□□□□□ -1.61
CCS1YMR038C SPE3Q12074 293 aaKnown RBP5.01□□□□□ -1.61
CCS1YMR038C CTF3Q12748 733 aa5.01□□□□□ -1.61
CCS1YMR038C APM4Q99186 491 aa5.01□□□□□ -1.61
CCS1YMR038C GAL80P04387 435 aa5□□□□□ -1.61
CCS1YMR038C RPL19AP0CX82 189 aaKnown RBP5□□□□□ -1.61
CCS1YMR038C RPL19BP0CX83 189 aaPredicted RBP5□□□□□ -1.61
CCS1YMR038C PYC1P11154 1178 aaKnown RBP5□□□□□ -1.61
CCS1YMR038C RNR1P21524 888 aaKnown RBP5□□□□□ -1.61
CCS1YMR038C PDR3P33200 976 aa5□□□□□ -1.61
CCS1YMR038C YBR056WP38081 501 aa5□□□□□ -1.61
CCS1YMR038C UBP13P38187 747 aa5□□□□□ -1.61
CCS1YMR038C HXT6P39003 570 aaKnown RBP5□□□□□ -1.61
CCS1YMR038C HXT7P39004 570 aa5□□□□□ -1.61
CCS1YMR038C OAF1P39720 1047 aaPredicted RBP5□□□□□ -1.61
CCS1YMR038C YEN1P40028 759 aa5□□□□□ -1.61
CCS1YMR038C BTT1P40314 149 aaPredicted RBP5□□□□□ -1.61
CCS1YMR038C GZF3P42944 551 aaKnown RBP5□□□□□ -1.61
CCS1YMR038C IES1P43579 692 aa5□□□□□ -1.61
CCS1YMR038C FYV8P46949 817 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 54.6 ms