RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C VHS3Q08438 674 aa10.53□□□□□ -0.72
SHM2YLR058C CLP1Q08685 445 aaPredicted RBP10.53□□□□□ -0.72
SHM2YLR058C SLP1Q12232 587 aa10.53□□□□□ -0.72
SHM2YLR058C YLR149CQ99296 730 aa10.53□□□□□ -0.72
SHM2YLR058C ATP12P22135 325 aa10.52□□□□□ -0.73
SHM2YLR058C LIP5P32875 414 aa10.52□□□□□ -0.73
SHM2YLR058C DSN1P40568 576 aa10.52□□□□□ -0.73
SHM2YLR058C FLC3P53121 802 aa10.52□□□□□ -0.73
SHM2YLR058C PRM1P53835 661 aa10.52□□□□□ -0.73
SHM2YLR058C MAP1Q01662 387 aaKnown RBP RIP-Chip data10.52□□□□□ -0.73not detected
SHM2YLR058C YLR053CQ12026 108 aa10.52□□□□□ -0.73
SHM2YLR058C FAB1P34756 2278 aa10.52□□□□□ -0.73
SHM2YLR058C MRM1P25270 412 aa10.51□□□□□ -0.73
SHM2YLR058C KIP2P28743 706 aa10.51□□□□□ -0.73
SHM2YLR058C CYM1P32898 989 aa10.51□□□□□ -0.73
SHM2YLR058C RGI2P40188 164 aa10.51□□□□□ -0.73
SHM2YLR058C TES1P41903 349 aaKnown RBP10.51□□□□□ -0.73
SHM2YLR058C REF2P42073 533 aaPredicted RBP10.51□□□□□ -0.73
SHM2YLR058C SIP4P46954 829 aa10.51□□□□□ -0.73
SHM2YLR058C CSN12P47130 423 aa10.51□□□□□ -0.73
SHM2YLR058C COG1P53079 417 aa10.51□□□□□ -0.73
SHM2YLR058C EFM6P53970 246 aa10.51□□□□□ -0.73
SHM2YLR058C YDR132CQ03900 495 aa10.51□□□□□ -0.73
SHM2YLR058C YPR114WQ06107 315 aa10.51□□□□□ -0.73
SHM2YLR058C RSC2Q06488 889 aa10.51□□□□□ -0.73
SHM2YLR058C MPD2Q99316 277 aa10.51□□□□□ -0.73
SHM2YLR058C LEU1P07264 779 aaKnown RBP10.5□□□□□ -0.73
SHM2YLR058C FPR1P20081 114 aaKnown RBP10.5□□□□□ -0.73
SHM2YLR058C SEC14P24280 304 aaKnown RBP10.5□□□□□ -0.73
SHM2YLR058C MNE1P24720 663 aa10.5□□□□□ -0.73
SHM2YLR058C YJU3P28321 313 aa10.5□□□□□ -0.73
SHM2YLR058C BEM1P29366 551 aa10.5□□□□□ -0.73
SHM2YLR058C IMP3P32899 183 aaPredicted RBP10.5□□□□□ -0.73
SHM2YLR058C STE13P33894 931 aa10.5□□□□□ -0.73
SHM2YLR058C SCD5P34758 872 aa10.5□□□□□ -0.73
SHM2YLR058C SSP120P39931 234 aaKnown RBP10.5□□□□□ -0.73
SHM2YLR058C RPL34BP40525 121 aaKnown RBP10.5□□□□□ -0.73
SHM2YLR058C RPN9Q04062 393 aaKnown RBP10.5□□□□□ -0.73
SHM2YLR058C LCB5Q06147 687 aaKnown RBP10.5□□□□□ -0.73
SHM2YLR058C NSE1Q07913 336 aa10.5□□□□□ -0.73
SHM2YLR058C RMD5Q12508 421 aa10.5□□□□□ -0.73
SHM2YLR058C MSF1P08425 469 aa10.5□□□□□ -0.73
SHM2YLR058C PMA2P19657 947 aa10.5□□□□□ -0.73
SHM2YLR058C HRR25P29295 494 aaKnown RBP10.5□□□□□ -0.73
SHM2YLR058C RIM1P32445 135 aaKnown RBP10.5□□□□□ -0.73
SHM2YLR058C BEM3P32873 1128 aa10.5□□□□□ -0.73
SHM2YLR058C CTF13P35203 478 aa10.5□□□□□ -0.73
SHM2YLR058C YBR032WP38223 100 aa10.5□□□□□ -0.73
SHM2YLR058C YIR007WP40566 764 aa10.5□□□□□ -0.73
SHM2YLR058C YJL107CP42947 387 aa10.5□□□□□ -0.73
SHM2YLR058C TRS85P46944 698 aa10.5□□□□□ -0.73
SHM2YLR058C ATH1P48016 1211 aa10.5□□□□□ -0.73
SHM2YLR058C MNT2P53059 558 aa10.5□□□□□ -0.73
SHM2YLR058C EMC4P53073 190 aa10.5□□□□□ -0.73
SHM2YLR058C PEX8P53248 589 aa10.5□□□□□ -0.73
SHM2YLR058C BUD32P53323 261 aa10.5□□□□□ -0.73
SHM2YLR058C PET117Q02771 107 aa10.5□□□□□ -0.73
SHM2YLR058C TFB2Q02939 513 aa10.5□□□□□ -0.73
SHM2YLR058C MCP2Q06567 569 aa10.5□□□□□ -0.73
SHM2YLR058C SYT1Q06836 1226 aa10.5□□□□□ -0.73
SHM2YLR058C KCS1Q12494 1050 aa10.5□□□□□ -0.73
SHM2YLR058C SEC63P14906 663 aa10.49□□□□□ -0.73
SHM2YLR058C NSP1P14907 823 aaKnown RBP10.49□□□□□ -0.73
SHM2YLR058C EMC1P25574 760 aa10.49□□□□□ -0.73
SHM2YLR058C PXA2P34230 853 aa10.49□□□□□ -0.73
SHM2YLR058C VPS41P38959 992 aa10.49□□□□□ -0.73
SHM2YLR058C OAF1P39720 1047 aaPredicted RBP10.49□□□□□ -0.73
SHM2YLR058C OSW5P40219 148 aa10.49□□□□□ -0.73
SHM2YLR058C PEP8P40335 379 aa10.49□□□□□ -0.73
SHM2YLR058C LIA1P47120 325 aaKnown RBP10.49□□□□□ -0.73
SHM2YLR058C RSM7P47150 247 aa10.49□□□□□ -0.73
SHM2YLR058C YJR124CP47159 448 aa10.49□□□□□ -0.73
SHM2YLR058C FAP1P53971 965 aa10.49□□□□□ -0.73
SHM2YLR058C YMR209CQ03648 457 aa10.49□□□□□ -0.73
SHM2YLR058C YDR109CQ04585 715 aa10.49□□□□□ -0.73
SHM2YLR058C GSF2Q04697 403 aaKnown RBP10.49□□□□□ -0.73
SHM2YLR058C ADY3Q07732 790 aa10.49□□□□□ -0.73
SHM2YLR058C IRC10Q08118 586 aa10.49□□□□□ -0.73
SHM2YLR058C YMR030W-AQ3E760 96 aa10.49□□□□□ -0.73
SHM2YLR058C UBR1P19812 1950 aa10.48□□□□□ -0.73
SHM2YLR058C FUS1P11710 512 aa10.48□□□□□ -0.73
SHM2YLR058C GLN4P13188 809 aaKnown RBP10.48□□□□□ -0.73
SHM2YLR058C AMD1P15274 810 aaKnown RBP10.48□□□□□ -0.73
SHM2YLR058C MAK5P38112 773 aaPredicted RBP10.48□□□□□ -0.73
SHM2YLR058C LIN1P38852 340 aaPredicted RBP10.48□□□□□ -0.73
SHM2YLR058C YJL206CP39529 758 aa10.48□□□□□ -0.73
SHM2YLR058C YNR061CP53747 219 aa10.48□□□□□ -0.73
SHM2YLR058C VAC7P53950 1165 aa10.48□□□□□ -0.73
SHM2YLR058C MSH2P25847 964 aa10.47□□□□□ -0.73
SHM2YLR058C PHO11P35842 467 aa10.47□□□□□ -0.73
SHM2YLR058C RRP14P36080 434 aaKnown RBP10.47□□□□□ -0.73
SHM2YLR058C IRS4P36115 615 aaKnown RBP10.47□□□□□ -0.73
SHM2YLR058C PHO12P38693 467 aa10.47□□□□□ -0.73
SHM2YLR058C GND1P38720 489 aaKnown RBP10.47□□□□□ -0.73
SHM2YLR058C MNN1P39106 762 aa10.47□□□□□ -0.73
SHM2YLR058C GLG2P47011 380 aa10.47□□□□□ -0.73
SHM2YLR058C ARH1P48360 493 aa10.47□□□□□ -0.73
SHM2YLR058C SPC105P53148 917 aa10.47□□□□□ -0.73
SHM2YLR058C UBX4P54730 416 aa10.47□□□□□ -0.73
SHM2YLR058C ADE12P80210 433 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms