RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C LCB4Q12246 624 aa2.46□□□□□ -2.02
UBP11YKR098C TAF3Q12297 353 aa2.46□□□□□ -2.02
UBP11YKR098C ZPS1Q12512 249 aa2.46□□□□□ -2.02
UBP11YKR098C HSH49Q99181 213 aaPredicted RBP2.46□□□□□ -2.02
UBP11YKR098C COX1P00401 534 aa2.46□□□□□ -2.02
UBP11YKR098C GCN4P03069 281 aa2.46□□□□□ -2.02
UBP11YKR098C CPA2P03965 1118 aaKnown RBP2.46□□□□□ -2.02
UBP11YKR098C PRE8P23639 250 aa2.46□□□□□ -2.02
UBP11YKR098C GDA1P32621 518 aa2.46□□□□□ -2.02
UBP11YKR098C TFC3P34111 1160 aa2.46□□□□□ -2.02
UBP11YKR098C KTR3P38130 404 aaPredicted RBP2.46□□□□□ -2.02
UBP11YKR098C FLC2P39719 783 aa2.46□□□□□ -2.02
UBP11YKR098C DJP1P40564 432 aa2.46□□□□□ -2.02
UBP11YKR098C IME4P41833 600 aa2.46□□□□□ -2.02
UBP11YKR098C MSY1P48527 492 aa2.46□□□□□ -2.02
UBP11YKR098C DSD1P53095 428 aa2.46□□□□□ -2.02
UBP11YKR098C COQ6P53318 479 aa2.46□□□□□ -2.02
UBP11YKR098C BAG7Q12128 409 aa2.46□□□□□ -2.02
UBP11YKR098C ACF2Q12168 779 aa2.46□□□□□ -2.02
UBP11YKR098C MDM20Q12387 796 aaKnown RBP2.46□□□□□ -2.02
UBP11YKR098C NOP58Q12499 511 aaKnown RBP2.46□□□□□ -2.02
UBP11YKR098C PGA3Q12746 312 aaKnown RBP2.46□□□□□ -2.02
UBP11YKR098C AI5_ALPHAQ9ZZX1 630 aa2.46□□□□□ -2.02
UBP11YKR098C SIP1P32578 815 aa2.45□□□□□ -2.02
UBP11YKR098C NPL6P32832 435 aa2.45□□□□□ -2.02
UBP11YKR098C RPF2P36160 344 aaKnown RBP2.45□□□□□ -2.02
UBP11YKR098C CHS7P38843 316 aa2.45□□□□□ -2.02
UBP11YKR098C MTG2P38860 518 aa2.45□□□□□ -2.02
UBP11YKR098C RTS1P38903 757 aa2.45□□□□□ -2.02
UBP11YKR098C FUN12P39730 1002 aaKnown RBP2.45□□□□□ -2.02
UBP11YKR098C JHD1P40034 492 aa2.45□□□□□ -2.02
UBP11YKR098C MSE1P48525 536 aa2.45□□□□□ -2.02
UBP11YKR098C STB4P50104 949 aa2.45□□□□□ -2.02
UBP11YKR098C YGL117WP53133 265 aa2.45□□□□□ -2.02
UBP11YKR098C YGL036WP53185 909 aaPredicted RBP2.45□□□□□ -2.02
UBP11YKR098C MDG1P53885 366 aa2.45□□□□□ -2.02
UBP11YKR098C YPL071CQ02864 156 aa2.45□□□□□ -2.02
UBP11YKR098C FCP1Q03254 732 aa2.45□□□□□ -2.02
UBP11YKR098C RAD33Q04231 177 aa2.45□□□□□ -2.02
UBP11YKR098C YML053CQ04978 212 aa2.45□□□□□ -2.02
UBP11YKR098C ARP9Q05123 467 aa2.45□□□□□ -2.02
UBP11YKR098C HBT1Q07653 1046 aaKnown RBP2.45□□□□□ -2.02
UBP11YKR098C GPN2Q08726 347 aaPredicted RBP2.45□□□□□ -2.02
UBP11YKR098C PCL8Q08966 492 aa2.45□□□□□ -2.02
UBP11YKR098C RRG1Q12167 365 aaPredicted RBP2.45□□□□□ -2.02
UBP11YKR098C ARG3P05150 338 aa2.44□□□□□ -2.02
UBP11YKR098C PCT1P13259 424 aa2.44□□□□□ -2.02
UBP11YKR098C CKA1P15790 372 aa2.44□□□□□ -2.02
UBP11YKR098C AUR1P36107 401 aaPredicted RBP2.44□□□□□ -2.02
UBP11YKR098C UBP13P38187 747 aa2.44□□□□□ -2.02
UBP11YKR098C GIP4P39732 760 aa2.44□□□□□ -2.02
UBP11YKR098C LAS21P40367 830 aa2.44□□□□□ -2.02
UBP11YKR098C SEC24P40482 926 aaKnown RBP2.44□□□□□ -2.02
UBP11YKR098C SPO22P40511 975 aa2.44□□□□□ -2.02
UBP11YKR098C SWP82P43554 623 aa2.44□□□□□ -2.02
UBP11YKR098C LYS4P49367 693 aaPredicted RBP2.44□□□□□ -2.02
UBP11YKR098C COG2P53271 262 aa2.44□□□□□ -2.02
UBP11YKR098C SYF1Q04048 859 aaPredicted RBP2.44□□□□□ -2.02
UBP11YKR098C YDR109CQ04585 715 aa2.44□□□□□ -2.02
UBP11YKR098C GFD1Q04839 188 aaKnown RBP2.44□□□□□ -2.02
UBP11YKR098C SKG3Q06315 1026 aa2.44□□□□□ -2.02
UBP11YKR098C CRN1Q06440 651 aa2.44□□□□□ -2.02
UBP11YKR098C SWA2Q06677 668 aa2.44□□□□□ -2.02
UBP11YKR098C YPL191CQ08930 360 aa2.44□□□□□ -2.02
UBP11YKR098C RCN2Q12044 265 aa2.44□□□□□ -2.02
UBP11YKR098C SPE4Q12455 300 aa2.44□□□□□ -2.02
UBP11YKR098C MET17P06106 444 aa2.44□□□□□ -2.02
UBP11YKR098C SES1P07284 462 aaKnown RBP2.44□□□□□ -2.02
UBP11YKR098C CBS1P14066 229 aa2.44□□□□□ -2.02
UBP11YKR098C FUR1P18562 216 aaKnown RBP2.44□□□□□ -2.02
UBP11YKR098C SRP54P20424 541 aaKnown RBP2.44□□□□□ -2.02
UBP11YKR098C RRP43P25359 394 aaPredicted RBP2.44□□□□□ -2.02
UBP11YKR098C LAC1P28496 418 aa2.44□□□□□ -2.02
UBP11YKR098C MRPL9P31334 269 aa2.44□□□□□ -2.02
UBP11YKR098C ERG3P32353 365 aa2.44□□□□□ -2.02
UBP11YKR098C SDS3P40505 327 aa2.44□□□□□ -2.02
UBP11YKR098C ARF3P40994 183 aaRIP-Chip data2.44□□□□□ -2.02not detected
UBP11YKR098C YFL015CP43578 164 aa2.44□□□□□ -2.02
UBP11YKR098C CPR8P53728 308 aa2.44□□□□□ -2.02
UBP11YKR098C YAT1P80235 687 aa2.44□□□□□ -2.02
UBP11YKR098C RPT6Q01939 405 aaKnown RBP2.44□□□□□ -2.02
UBP11YKR098C INA17Q02888 182 aa2.44□□□□□ -2.02
UBP11YKR098C WAR1Q03631 944 aa2.44□□□□□ -2.02
UBP11YKR098C PLM2Q04383 521 aa2.44□□□□□ -2.02
UBP11YKR098C SPN1Q06505 410 aaPredicted RBP2.44□□□□□ -2.02
UBP11YKR098C YPL272CQ08984 517 aa2.44□□□□□ -2.02
UBP11YKR098C PUS9Q12069 462 aa2.44□□□□□ -2.02
UBP11YKR098C YBR085C-AO43137 85 aa2.43□□□□□ -2.02
UBP11YKR098C TPK2P06245 380 aa2.43□□□□□ -2.02
UBP11YKR098C RED1P14291 827 aa2.43□□□□□ -2.02
UBP11YKR098C ROX1P25042 368 aa2.43□□□□□ -2.02
UBP11YKR098C POL4P25615 582 aa2.43□□□□□ -2.02
UBP11YKR098C CDC15P27636 974 aa2.43□□□□□ -2.02
UBP11YKR098C MAL33P38157 468 aa2.43□□□□□ -2.02
UBP11YKR098C VBA2P38358 474 aaKnown RBP2.43□□□□□ -2.02
UBP11YKR098C SAP1P39955 897 aaKnown RBP2.43□□□□□ -2.02
UBP11YKR098C TDA10P42938 290 aa2.43□□□□□ -2.02
UBP11YKR098C CIR1P42940 261 aa2.43□□□□□ -2.02
UBP11YKR098C UBX6P47049 396 aa2.43□□□□□ -2.02
UBP11YKR098C ASN1P49089 572 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 161.9 ms