RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C STB4P50104 949 aa3.61□□□□□ -1.83
SSM4YIL030C ALT2P52892 507 aa3.61□□□□□ -1.83
SSM4YIL030C BIO4P53630 237 aa3.61□□□□□ -1.83
SSM4YIL030C YNL146WP53906 100 aa3.61□□□□□ -1.83
SSM4YIL030C YML020WQ03722 664 aa3.61□□□□□ -1.83
SSM4YIL030C MCM21Q06675 368 aa3.61□□□□□ -1.83
SSM4YIL030C MRPL35Q06678 367 aa3.61□□□□□ -1.83
SSM4YIL030C YOL159C-AQ3E769 90 aa3.61□□□□□ -1.83
SSM4YIL030C ADE4P04046 510 aaKnown RBP3.61□□□□□ -1.83
SSM4YIL030C MSS18P08593 268 aa3.61□□□□□ -1.83
SSM4YIL030C HSF1P10961 833 aa3.61□□□□□ -1.83
SSM4YIL030C SPO16P17122 198 aa3.61□□□□□ -1.83
SSM4YIL030C SAM2P19358 384 aaKnown RBP3.61□□□□□ -1.83
SSM4YIL030C YSP3P25036 478 aa3.61□□□□□ -1.83
SSM4YIL030C SPB1P25582 841 aaPredicted RBP3.61□□□□□ -1.83
SSM4YIL030C SEC66P33754 206 aa3.61□□□□□ -1.83
SSM4YIL030C MUP3P38734 546 aa3.61□□□□□ -1.83
SSM4YIL030C CCT6P39079 546 aa3.61□□□□□ -1.83
SSM4YIL030C PCL6P40038 420 aa3.61□□□□□ -1.83
SSM4YIL030C YNL095CP53932 642 aa3.61□□□□□ -1.83
SSM4YIL030C REX2P54964 269 aaKnown RBP3.61□□□□□ -1.83
SSM4YIL030C GPB1Q08886 897 aa3.61□□□□□ -1.83
SSM4YIL030C RAD18P10862 487 aa3.6□□□□□ -1.83
SSM4YIL030C KIN2P13186 1147 aaKnown RBP3.6□□□□□ -1.83
SSM4YIL030C RPL8AP17076 256 aaKnown RBP3.6□□□□□ -1.83
SSM4YIL030C RGR1P19263 1082 aa3.6□□□□□ -1.83
SSM4YIL030C DAL2P25335 343 aa3.6□□□□□ -1.83
SSM4YIL030C TAH1P25638 111 aaPredicted RBP3.6□□□□□ -1.83
SSM4YIL030C MRE11P32829 692 aa3.6□□□□□ -1.83
SSM4YIL030C YBR139WP38109 508 aa3.6□□□□□ -1.83
SSM4YIL030C PPE1P38796 400 aa3.6□□□□□ -1.83
SSM4YIL030C SFB3P38810 929 aa3.6□□□□□ -1.83
SSM4YIL030C AXL2P38928 823 aa3.6□□□□□ -1.83
SSM4YIL030C RRP8P38961 392 aaKnown RBP3.6□□□□□ -1.83
SSM4YIL030C NPT1P39683 429 aaKnown RBP3.6□□□□□ -1.83
SSM4YIL030C FLC2P39719 783 aa3.6□□□□□ -1.83
SSM4YIL030C ISC1P40015 477 aaKnown RBP3.6□□□□□ -1.83
SSM4YIL030C ELO3P40319 345 aa3.6□□□□□ -1.83
SSM4YIL030C MPM1P40364 252 aa3.6□□□□□ -1.83
SSM4YIL030C ALY2P47029 1046 aa3.6□□□□□ -1.83
SSM4YIL030C JHD2P47156 728 aaPredicted RBP3.6□□□□□ -1.83
SSM4YIL030C TLG1Q03322 224 aa3.6□□□□□ -1.83
SSM4YIL030C DML1Q03652 475 aa3.6□□□□□ -1.83
SSM4YIL030C URC2Q04411 772 aa3.6□□□□□ -1.83
SSM4YIL030C HSP42Q12329 375 aa3.6□□□□□ -1.83
SSM4YIL030C ERP3Q12403 225 aa3.6□□□□□ -1.83
SSM4YIL030C TDH1P00360 332 aaKnown RBP3.6□□□□□ -1.83
SSM4YIL030C MST1P07236 462 aa3.6□□□□□ -1.83
SSM4YIL030C SNF4P12904 322 aa3.6□□□□□ -1.83
SSM4YIL030C GLN3P18494 730 aa3.6□□□□□ -1.83
SSM4YIL030C HSP60P19882 572 aaKnown RBP3.6□□□□□ -1.83
SSM4YIL030C YKL023WP36103 277 aaKnown RBP3.6□□□□□ -1.83
SSM4YIL030C CAF4P36130 643 aa3.6□□□□□ -1.83
SSM4YIL030C YLF2P38746 405 aa3.6□□□□□ -1.83
SSM4YIL030C YHL008CP38750 627 aa3.6□□□□□ -1.83
SSM4YIL030C YHR218WP38899 603 aa3.6□□□□□ -1.83
SSM4YIL030C MTW1P39731 289 aa3.6□□□□□ -1.83
SSM4YIL030C HMF1P40037 129 aaKnown RBP3.6□□□□□ -1.83
SSM4YIL030C SER3P40054 469 aa3.6□□□□□ -1.83
SSM4YIL030C NTA1P40354 457 aa3.6□□□□□ -1.83
SSM4YIL030C YRB1P41920 201 aaKnown RBP3.6□□□□□ -1.83
SSM4YIL030C EMC2P47133 292 aaKnown RBP3.6□□□□□ -1.83
SSM4YIL030C ECL1P48235 211 aa3.6□□□□□ -1.83
SSM4YIL030C MND1P53102 219 aa3.6□□□□□ -1.83
SSM4YIL030C MET13P53128 600 aa3.6□□□□□ -1.83
SSM4YIL030C RTT102P53330 157 aa3.6□□□□□ -1.83
SSM4YIL030C YLR446WQ06204 433 aa3.6□□□□□ -1.83
SSM4YIL030C EMG1Q06287 252 aaKnown RBP3.6□□□□□ -1.83
SSM4YIL030C YPR097WQ06839 1073 aa3.6□□□□□ -1.83
SSM4YIL030C IWR1Q07532 353 aaPredicted RBP3.6□□□□□ -1.83
SSM4YIL030C YPR027CQ12079 277 aa3.6□□□□□ -1.83
SSM4YIL030C AAD3P25612 363 aa3.6□□□□□ -1.83
SSM4YIL030C SSE1P32589 693 aaKnown RBP3.6□□□□□ -1.83
SSM4YIL030C YKU70P32807 602 aa3.6□□□□□ -1.83
SSM4YIL030C MDJ1P35191 511 aa3.6□□□□□ -1.83
SSM4YIL030C YKL222CP35995 705 aa3.6□□□□□ -1.83
SSM4YIL030C MNN2P38069 597 aa3.6□□□□□ -1.83
SSM4YIL030C MBA1P38300 278 aa3.6□□□□□ -1.83
SSM4YIL030C SAW1P39735 261 aa3.6□□□□□ -1.83
SSM4YIL030C MEP1P40260 492 aa3.6□□□□□ -1.83
SSM4YIL030C FET5P43561 622 aa3.6□□□□□ -1.83
SSM4YIL030C VMA10P48836 114 aaKnown RBP3.6□□□□□ -1.83
SSM4YIL030C MRM2P53123 320 aa3.6□□□□□ -1.83
SSM4YIL030C DIP5P53388 608 aa3.6□□□□□ -1.83
SSM4YIL030C RKM1Q08961 583 aaPredicted RBP3.6□□□□□ -1.83
SSM4YIL030C SPE3Q12074 293 aaKnown RBP3.6□□□□□ -1.83
SSM4YIL030C YLL056CQ12177 298 aa3.6□□□□□ -1.83
SSM4YIL030C RGS2Q99188 309 aa3.6□□□□□ -1.83
SSM4YIL030C NHA1Q99271 985 aa3.6□□□□□ -1.83
SSM4YIL030C YLR149CQ99296 730 aa3.6□□□□□ -1.83
SSM4YIL030C QCR7P00128 127 aa3.59□□□□□ -1.83
SSM4YIL030C AI3P03877 415 aa3.59□□□□□ -1.83
SSM4YIL030C SEC63P14906 663 aa3.59□□□□□ -1.83
SSM4YIL030C TRX1P22217 103 aaKnown RBP3.59□□□□□ -1.83
SSM4YIL030C BUD2P33314 1104 aa3.59□□□□□ -1.83
SSM4YIL030C YBR284WP38150 797 aa3.59□□□□□ -1.83
SSM4YIL030C TPA1P40032 644 aaKnown RBP3.59□□□□□ -1.83
SSM4YIL030C PEA2P40091 420 aa3.59□□□□□ -1.83
SSM4YIL030C MRK1P50873 501 aa3.59□□□□□ -1.83
SSM4YIL030C LSB1P53281 241 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms