RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC9	YGR009C	OSW2	Q12202	724 aa		4.93	□□□□□ -1.62
SEC9	YGR009C	RPO31	P04051	1460 aa		4.92	□□□□□ -1.62
SEC9	YGR009C	RPS6A	P0CX37	236 aa	Known RBP	4.92	□□□□□ -1.62
SEC9	YGR009C	RPS6B	P0CX38	236 aa	Predicted RBP	4.92	□□□□□ -1.62
SEC9	YGR009C	ADP1	P25371	1049 aa		4.92	□□□□□ -1.62
SEC9	YGR009C	SEC1	P30619	724 aa	Known RBP	4.92	□□□□□ -1.62
SEC9	YGR009C	RAD5	P32849	1169 aa	Predicted RBP	4.92	□□□□□ -1.62
SEC9	YGR009C	YBR184W	P38299	523 aa		4.92	□□□□□ -1.62
SEC9	YGR009C	FCY21	P40039	528 aa		4.92	□□□□□ -1.62
SEC9	YGR009C	SIP5	P40210	489 aa	Known RBP	4.92	□□□□□ -1.62
SEC9	YGR009C	THI6	P41835	540 aa		4.92	□□□□□ -1.62
SEC9	YGR009C	SGF73	P53165	657 aa		4.92	□□□□□ -1.62
SEC9	YGR009C	MAK10	Q02197	733 aa		4.92	□□□□□ -1.62
SEC9	YGR009C	FCP1	Q03254	732 aa		4.92	□□□□□ -1.62
SEC9	YGR009C	RCO1	Q04779	684 aa		4.92	□□□□□ -1.62
SEC9	YGR009C	YLR173W	Q06247	608 aa		4.92	□□□□□ -1.62
SEC9	YGR009C	YLR413W	Q06689	675 aa		4.92	□□□□□ -1.62
SEC9	YGR009C	SAM3	Q08986	587 aa		4.92	□□□□□ -1.62
SEC9	YGR009C	RTR2	Q12378	196 aa		4.92	□□□□□ -1.62
SEC9	YGR009C	PNS1	Q12412	539 aa		4.92	□□□□□ -1.62
SEC9	YGR009C	ARD1	P07347	238 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	RPL35A	P0CX84	120 aa	Known RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	RPL35B	P0CX85	120 aa	Known RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	APE1	P14904	514 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	PFK1	P16861	987 aa	Known RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
SEC9	YGR009C	PHO3	P24031	467 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	MSP1	P28737	362 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	MLS1	P30952	554 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	RPD3	P32561	433 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	RTG1	P32607	177 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	CTF13	P35203	478 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	GLG1	P36143	616 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	GPT2	P36148	743 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	RFT1	P38206	574 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	SDH8	P38345	138 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	PZF1	P39933	429 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	ATM1	P40416	690 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	CAB2	P40506	365 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	STB1	P42845	420 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	ALK1	P43633	760 aa	Known RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	HSV2	P50079	448 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	TIM21	P53220	239 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	RRN9	P53437	365 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	MPP6	P53725	186 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	FIN1	Q03898	291 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	ATC1	Q04005	294 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	BUD22	Q04347	519 aa	Known RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	ARG7	Q04728	441 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	YLR456W	Q06199	204 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	DXO1	Q06349	442 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	YPR147C	Q06522	304 aa	Known RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	SMC5	Q08204	1093 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	YPL216W	Q08964	1102 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
SEC9	YGR009C	TIP41	Q12199	356 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	IES3	Q12345	250 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	RTN2	Q12443	393 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	CMR1	Q12510	522 aa	Known RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	MYO4	P32492	1471 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	PHO5	P00635	467 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	STE12	P13574	688 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	YCR101C	P25607	182 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	IMG2	P25642	146 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	CRM1	P30822	1084 aa	Known RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	ATP11	P32453	318 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	DUT1	P33317	147 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	MCD4	P36051	919 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	ADH5	P38113	351 aa	Known RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	FHL1	P39521	936 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	HPM1	P40481	377 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	RSM26	P47141	266 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	RBL2	P48606	106 aa	Known RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	GNP1	P48813	663 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	PRP31	P49704	494 aa	Predicted RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	PEX29	Q03370	554 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	YDR514C	Q04408	483 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	AIM32	Q04689	311 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	HCR1	Q05775	265 aa	Known RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	HBT1	Q07653	1046 aa	Known RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	DIS3	Q08162	1001 aa	Known RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	NGL1	Q08213	363 aa	Known RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	MUM3	Q08750	479 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	ULA1	Q12059	462 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	HFI1	Q12060	488 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	VAM3	Q12241	283 aa		4.91	□□□□□ -1.62
SEC9	YGR009C	MDM20	Q12387	796 aa	Known RBP	4.91	□□□□□ -1.62
SEC9	YGR009C	GAL4	P04386	881 aa		4.9	□□□□□ -1.63
SEC9	YGR009C	TPK1	P06244	397 aa		4.9	□□□□□ -1.63
SEC9	YGR009C	OLE1	P21147	510 aa	Known RBP	4.9	□□□□□ -1.63
SEC9	YGR009C	SPE2	P21182	396 aa		4.9	□□□□□ -1.63
SEC9	YGR009C	RNR1	P21524	888 aa	Known RBP	4.9	□□□□□ -1.63
SEC9	YGR009C	CTR86	P25355	563 aa		4.9	□□□□□ -1.63
SEC9	YGR009C	SYP1	P25623	870 aa	Known RBP	4.9	□□□□□ -1.63
SEC9	YGR009C	IMG1	P25626	169 aa		4.9	□□□□□ -1.63
SEC9	YGR009C	BUD23	P25627	275 aa	Predicted RBP	4.9	□□□□□ -1.63
SEC9	YGR009C	MKK2	P32491	506 aa		4.9	□□□□□ -1.63
SEC9	YGR009C	DBP7	P36120	742 aa	Known RBP	4.9	□□□□□ -1.63
SEC9	YGR009C	SSH1	P38353	490 aa	Known RBP	4.9	□□□□□ -1.63
SEC9	YGR009C	PCM1	P38628	557 aa	Known RBP	4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms