RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W RAD26P40352 1085 aa7.89□□□□□ -1.15
SHC1YER096W PAN6P40459 309 aa7.89□□□□□ -1.15
SHC1YER096W BUD13P46947 266 aaPredicted RBP7.89□□□□□ -1.15
SHC1YER096W VEL1P53058 206 aa7.89□□□□□ -1.15
SHC1YER096W LEE1Q02799 301 aaKnown RBP7.89□□□□□ -1.15
SHC1YER096W NSE5Q03718 556 aa7.89□□□□□ -1.15
SHC1YER096W SEG1Q04279 960 aa7.89□□□□□ -1.15
SHC1YER096W VHS3Q08438 674 aa7.89□□□□□ -1.15
SHC1YER096W STB3Q12427 513 aa7.89□□□□□ -1.15
SHC1YER096W PEX11Q12462 236 aa7.89□□□□□ -1.15
SHC1YER096W KCS1Q12494 1050 aa7.89□□□□□ -1.15
SHC1YER096W AMD1P15274 810 aaKnown RBP7.88□□□□□ -1.15
SHC1YER096W ATP12P22135 325 aa7.88□□□□□ -1.15
SHC1YER096W CDC10P25342 322 aaKnown RBP7.88□□□□□ -1.15
SHC1YER096W SWE1P32944 819 aa7.88□□□□□ -1.15
SHC1YER096W MRPL40P36534 297 aa7.88□□□□□ -1.15
SHC1YER096W RDH54P38086 958 aa7.88□□□□□ -1.15
SHC1YER096W MRP21P38175 177 aa7.88□□□□□ -1.15
SHC1YER096W GND1P38720 489 aaKnown RBP7.88□□□□□ -1.15
SHC1YER096W HEM14P40012 539 aa7.88□□□□□ -1.15
SHC1YER096W SAP4P53036 818 aa7.88□□□□□ -1.15
SHC1YER096W TOF2Q02208 771 aa7.88□□□□□ -1.15
SHC1YER096W LDB18Q07887 179 aa7.88□□□□□ -1.15
SHC1YER096W RGS2Q99188 309 aa7.88□□□□□ -1.15
SHC1YER096W GCY1P14065 312 aaKnown RBP RIP-Chip data7.88□□□□□ -1.15not detected
SHC1YER096W DCC1P25559 380 aa7.88□□□□□ -1.15
SHC1YER096W AEP1P32493 518 aa7.88□□□□□ -1.15
SHC1YER096W IRS4P36115 615 aaKnown RBP7.88□□□□□ -1.15
SHC1YER096W RIM2P38127 377 aa7.88□□□□□ -1.15
SHC1YER096W YSW1P38280 609 aa7.88□□□□□ -1.15
SHC1YER096W YHL041WP38730 149 aa7.88□□□□□ -1.15
SHC1YER096W CRP1P38845 465 aaKnown RBP7.88□□□□□ -1.15
SHC1YER096W HOS4P40480 1083 aa7.88□□□□□ -1.15
SHC1YER096W RPL34BP40525 121 aaKnown RBP7.88□□□□□ -1.15
SHC1YER096W REF2P42073 533 aaPredicted RBP7.88□□□□□ -1.15
SHC1YER096W CSN12P47130 423 aa7.88□□□□□ -1.15
SHC1YER096W COG1P53079 417 aa7.88□□□□□ -1.15
SHC1YER096W SHE9Q04172 456 aa7.88□□□□□ -1.15
SHC1YER096W SYT1Q06836 1226 aa7.88□□□□□ -1.15
SHC1YER096W NOB1Q08444 459 aaKnown RBP7.88□□□□□ -1.15
SHC1YER096W SPE4Q12455 300 aa7.88□□□□□ -1.15
SHC1YER096W YPR117WQ06116 2489 aa7.87□□□□□ -1.15
SHC1YER096W SPS1P08458 490 aa7.87□□□□□ -1.15
SHC1YER096W SCH9P11792 824 aaKnown RBP7.87□□□□□ -1.15
SHC1YER096W NSP1P14907 823 aaKnown RBP7.87□□□□□ -1.15
SHC1YER096W PRP16P15938 1071 aaPredicted RBP7.87□□□□□ -1.15
SHC1YER096W DAL81P21657 970 aa7.87□□□□□ -1.15
SHC1YER096W RAM1P22007 431 aa7.87□□□□□ -1.15
SHC1YER096W MIH1P23748 554 aa7.87□□□□□ -1.15
SHC1YER096W PHO3P24031 467 aa7.87□□□□□ -1.15
SHC1YER096W MSH2P25847 964 aa7.87□□□□□ -1.15
SHC1YER096W HRR25P29295 494 aaKnown RBP7.87□□□□□ -1.15
SHC1YER096W DEP1P31385 405 aa7.87□□□□□ -1.15
SHC1YER096W COY1P34237 679 aa7.87□□□□□ -1.15
SHC1YER096W PHO11P35842 467 aa7.87□□□□□ -1.15
SHC1YER096W RRN3P36070 627 aa7.87□□□□□ -1.15
SHC1YER096W PHO12P38693 467 aa7.87□□□□□ -1.15
SHC1YER096W EXO1P39875 702 aa7.87□□□□□ -1.15
SHC1YER096W YIR007WP40566 764 aa7.87□□□□□ -1.15
SHC1YER096W ERG10P41338 398 aaKnown RBP7.87□□□□□ -1.15
SHC1YER096W LSB6P42951 607 aa7.87□□□□□ -1.15
SHC1YER096W MAD3P47074 515 aa7.87□□□□□ -1.15
SHC1YER096W IPI3P53877 555 aa7.87□□□□□ -1.15
SHC1YER096W VAC7P53950 1165 aa7.87□□□□□ -1.15
SHC1YER096W SUB1P54000 292 aaKnown RBP7.87□□□□□ -1.15
SHC1YER096W YVH1Q02256 364 aaKnown RBP7.87□□□□□ -1.15
SHC1YER096W TFB2Q02939 513 aa7.87□□□□□ -1.15
SHC1YER096W YDR344CQ05510 147 aa7.87□□□□□ -1.15
SHC1YER096W UPC2Q12151 913 aa7.87□□□□□ -1.15
SHC1YER096W SST2P11972 698 aaKnown RBP7.86□□□□□ -1.15
SHC1YER096W SEC63P14906 663 aa7.86□□□□□ -1.15
SHC1YER096W YSP3P25036 478 aa7.86□□□□□ -1.15
SHC1YER096W MLS1P30952 554 aa7.86□□□□□ -1.15
SHC1YER096W MRPL9P31334 269 aa7.86□□□□□ -1.15
SHC1YER096W RIM1P32445 135 aaKnown RBP7.86□□□□□ -1.15
SHC1YER096W PHA2P32452 334 aa7.86□□□□□ -1.15
SHC1YER096W GCD11P32481 527 aaKnown RBP7.86□□□□□ -1.15
SHC1YER096W STE5P32917 917 aa7.86□□□□□ -1.15
SHC1YER096W SCD5P34758 872 aa7.86□□□□□ -1.15
SHC1YER096W HSM3P38348 480 aa7.86□□□□□ -1.15
SHC1YER096W YHR131CP38835 850 aa7.86□□□□□ -1.15
SHC1YER096W PEX8P53248 589 aa7.86□□□□□ -1.15
SHC1YER096W TUB4P53378 473 aa7.86□□□□□ -1.15
SHC1YER096W PET117Q02771 107 aa7.86□□□□□ -1.15
SHC1YER096W CSN9Q03981 162 aa7.86□□□□□ -1.15
SHC1YER096W RSB1Q08417 382 aa7.86□□□□□ -1.15
SHC1YER096W TMA46Q12000 345 aaKnown RBP7.86□□□□□ -1.15
SHC1YER096W CHS5Q12114 671 aaKnown RBP7.86□□□□□ -1.15
SHC1YER096W PER33Q12144 273 aa7.86□□□□□ -1.15
SHC1YER096W NOT5Q12514 560 aaPredicted RBP7.86□□□□□ -1.15
SHC1YER096W STE2D6VTK4 431 aa7.85□□□□□ -1.15
SHC1YER096W LEU1P07264 779 aaKnown RBP7.85□□□□□ -1.15
SHC1YER096W MPH2P0CD99 609 aa7.85□□□□□ -1.15
SHC1YER096W AMD2P22580 549 aa7.85□□□□□ -1.15
SHC1YER096W YCR099CP25657 155 aa7.85□□□□□ -1.15
SHC1YER096W NIP1P32497 812 aaKnown RBP7.85□□□□□ -1.15
SHC1YER096W IMP3P32899 183 aaPredicted RBP7.85□□□□□ -1.15
SHC1YER096W YKL097CP34245 136 aa7.85□□□□□ -1.15
SHC1YER096W SQT1P35184 431 aa7.85□□□□□ -1.15
SHC1YER096W TFA2P36145 328 aa7.85□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms