RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W YIR042CP40586 236 aa3.4□□□□□ -1.87
SIZ1YDR409W STB1P42845 420 aa3.4□□□□□ -1.87
SIZ1YDR409W YFL064CP43540 174 aa3.4□□□□□ -1.87
SIZ1YDR409W YGR266WP53326 701 aa3.4□□□□□ -1.87
SIZ1YDR409W SNF12P53628 566 aa3.4□□□□□ -1.87
SIZ1YDR409W IST1P53843 298 aaPredicted RBP3.4□□□□□ -1.87
SIZ1YDR409W UBP2Q01476 1272 aa3.4□□□□□ -1.87
SIZ1YDR409W OSH6Q02201 448 aa3.4□□□□□ -1.87
SIZ1YDR409W RPM2Q02773 1202 aa3.4□□□□□ -1.87
SIZ1YDR409W PML39Q03760 334 aa3.4□□□□□ -1.87
SIZ1YDR409W HMO1Q03973 246 aaKnown RBP3.4□□□□□ -1.87
SIZ1YDR409W PHO92Q06390 306 aa3.4□□□□□ -1.87
SIZ1YDR409W YPR172WQ06608 200 aa3.4□□□□□ -1.87
SIZ1YDR409W PML1Q07930 204 aaPredicted RBP3.4□□□□□ -1.87
SIZ1YDR409W YBL111CQ3E7Y5 667 aa3.4□□□□□ -1.87
SIZ1YDR409W YPT6Q99260 215 aa3.4□□□□□ -1.87
SIZ1YDR409W PHR1P05066 565 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
SIZ1YDR409W CKA1P15790 372 aa3.39□□□□□ -1.87
SIZ1YDR409W URA4P20051 364 aa3.39□□□□□ -1.87
SIZ1YDR409W MSB1P21339 1137 aaKnown RBP3.39□□□□□ -1.87
SIZ1YDR409W MRPL25P23369 157 aa3.39□□□□□ -1.87
SIZ1YDR409W SGF29P25554 259 aa3.39□□□□□ -1.87
SIZ1YDR409W PRO3P32263 286 aaKnown RBP3.39□□□□□ -1.87
SIZ1YDR409W UTR2P32623 467 aa3.39□□□□□ -1.87
SIZ1YDR409W BCK2P33306 851 aa3.39□□□□□ -1.87
SIZ1YDR409W SEG2P34250 1132 aa3.39□□□□□ -1.87
SIZ1YDR409W LDH1P38139 375 aa3.39□□□□□ -1.87
SIZ1YDR409W YBL086CP38177 466 aa3.39□□□□□ -1.87
SIZ1YDR409W GIP1P38229 639 aa3.39□□□□□ -1.87
SIZ1YDR409W TIF5P38431 405 aaKnown RBP3.39□□□□□ -1.87
SIZ1YDR409W UTP7P40055 554 aaKnown RBP3.39□□□□□ -1.87
SIZ1YDR409W YFL054CP43549 646 aa3.39□□□□□ -1.87
SIZ1YDR409W FMP33P46998 180 aa3.39□□□□□ -1.87
SIZ1YDR409W CCT8P47079 568 aaKnown RBP3.39□□□□□ -1.87
SIZ1YDR409W RBL2P48606 106 aaKnown RBP3.39□□□□□ -1.87
SIZ1YDR409W TAF6P53040 516 aa3.39□□□□□ -1.87
SIZ1YDR409W YKR005CQ02203 525 aa3.39□□□□□ -1.87
SIZ1YDR409W LGE1Q02796 332 aaKnown RBP3.39□□□□□ -1.87
SIZ1YDR409W FMN1Q03778 218 aa3.39□□□□□ -1.87
SIZ1YDR409W ATG17Q06410 417 aa3.39□□□□□ -1.87
SIZ1YDR409W TRM11Q12463 433 aa3.39□□□□□ -1.87
SIZ1YDR409W RAD61Q99359 647 aa3.39□□□□□ -1.87
SIZ1YDR409W FLO1P32768 1537 aa3.39□□□□□ -1.87
SIZ1YDR409W SUI3P09064 285 aaKnown RBP3.39□□□□□ -1.87
SIZ1YDR409W YML002WP0CF17 737 aa3.39□□□□□ -1.87
SIZ1YDR409W YAK1P14680 807 aa3.39□□□□□ -1.87
SIZ1YDR409W SYP1P25623 870 aaKnown RBP3.39□□□□□ -1.87
SIZ1YDR409W TRK2P28584 889 aa3.39□□□□□ -1.87
SIZ1YDR409W CYS3P31373 394 aaKnown RBP3.39□□□□□ -1.87
SIZ1YDR409W CDC12P32468 407 aaKnown RBP3.39□□□□□ -1.87
SIZ1YDR409W YKU70P32807 602 aa3.39□□□□□ -1.87
SIZ1YDR409W NCL1P38205 684 aaKnown RBP3.39□□□□□ -1.87
SIZ1YDR409W YRB1P41920 201 aaKnown RBP3.39□□□□□ -1.87
SIZ1YDR409W AGX1P43567 385 aa3.39□□□□□ -1.87
SIZ1YDR409W ASE1P50275 885 aa3.39□□□□□ -1.87
SIZ1YDR409W PPM1Q04081 328 aa3.39□□□□□ -1.87
SIZ1YDR409W DON1Q05610 365 aa3.39□□□□□ -1.87
SIZ1YDR409W YDR278CQ05612 105 aa3.39□□□□□ -1.87
SIZ1YDR409W THI3Q07471 609 aa3.39□□□□□ -1.87
SIZ1YDR409W NSE1Q07913 336 aa3.39□□□□□ -1.87
SIZ1YDR409W DSE3Q08729 430 aa3.39□□□□□ -1.87
SIZ1YDR409W YOR389WQ08912 624 aa3.39□□□□□ -1.87
SIZ1YDR409W GUP2Q08929 609 aa3.39□□□□□ -1.87
SIZ1YDR409W ACM1Q08981 209 aa3.39□□□□□ -1.87
SIZ1YDR409W IOC2Q12072 812 aa3.39□□□□□ -1.87
SIZ1YDR409W CHS5Q12114 671 aaKnown RBP3.39□□□□□ -1.87
SIZ1YDR409W MSH5Q12175 901 aa3.39□□□□□ -1.87
SIZ1YDR409W RTN2Q12443 393 aa3.39□□□□□ -1.87
SIZ1YDR409W MRP10O75012 95 aa3.38□□□□□ -1.87
SIZ1YDR409W RPL24AP04449 155 aaKnown RBP3.38□□□□□ -1.87
SIZ1YDR409W RPS9BP05755 195 aaKnown RBP3.38□□□□□ -1.87
SIZ1YDR409W CBF1P17106 351 aa3.38□□□□□ -1.87
SIZ1YDR409W MGM1P32266 881 aa3.38□□□□□ -1.87
SIZ1YDR409W MF(ALPHA)2P32435 120 aa3.38□□□□□ -1.87
SIZ1YDR409W MRT4P33201 236 aaKnown RBP3.38□□□□□ -1.87
SIZ1YDR409W RPC37P36121 282 aa3.38□□□□□ -1.87
SIZ1YDR409W PPS1P38148 807 aa3.38□□□□□ -1.87
SIZ1YDR409W UBP13P38187 747 aa3.38□□□□□ -1.87
SIZ1YDR409W TSL1P38427 1098 aaKnown RBP3.38□□□□□ -1.87
SIZ1YDR409W DYS1P38791 387 aa3.38□□□□□ -1.87
SIZ1YDR409W END3P39013 349 aa3.38□□□□□ -1.87
SIZ1YDR409W SWD1P39706 426 aa3.38□□□□□ -1.87
SIZ1YDR409W GEM1P39722 662 aa3.38□□□□□ -1.87
SIZ1YDR409W IML2P47031 731 aa3.38□□□□□ -1.87
SIZ1YDR409W MRX6P48564 524 aa3.38□□□□□ -1.87
SIZ1YDR409W UBP15P50101 1230 aa3.38□□□□□ -1.87
SIZ1YDR409W UBC9P50623 157 aaPredicted RBP3.38□□□□□ -1.87
SIZ1YDR409W MIG2P53035 382 aa3.38□□□□□ -1.87
SIZ1YDR409W GUP1P53154 560 aa3.38□□□□□ -1.87
SIZ1YDR409W YNL247WP53852 767 aaKnown RBP3.38□□□□□ -1.87
SIZ1YDR409W YDR179W-AQ03983 463 aa3.38□□□□□ -1.87
SIZ1YDR409W SNO4Q04902 237 aa3.38□□□□□ -1.87
SIZ1YDR409W DBP9Q06218 594 aaKnown RBP3.38□□□□□ -1.87
SIZ1YDR409W GUD1Q07729 489 aa3.38□□□□□ -1.87
SIZ1YDR409W HSP33Q08914 237 aaKnown RBP3.38□□□□□ -1.87
SIZ1YDR409W HSP32Q08992 237 aa3.38□□□□□ -1.87
SIZ1YDR409W GLO4Q12320 285 aa3.38□□□□□ -1.87
SIZ1YDR409W YBR182C-AQ8TGU6 64 aa3.38□□□□□ -1.87
SIZ1YDR409W FLO11P08640 1367 aa3.38□□□□□ -1.87
SIZ1YDR409W ARG3P05150 338 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms