RNA–Protein interactions for RNA: YDL117W

CYK3, Transcript of SH3-domain protein located in the bud neck and cytokinetic actin ring, yeast

Gene CYK3, Length 2,658 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CYK3	YDL117W	RUB1	Q03919	77 aa		5.2	□□□□□ -1.58
CYK3	YDL117W	GPI17	Q04080	534 aa		5.2	□□□□□ -1.58
CYK3	YDL117W	SMF3	Q12078	473 aa	Predicted RBP	5.2	□□□□□ -1.58
CYK3	YDL117W	MRP2	P10663	115 aa	Predicted RBP	5.19	□□□□□ -1.58
CYK3	YDL117W	WHI2	P12611	486 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	ATP12	P22135	325 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	PRD1	P25375	712 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	FUN30	P31380	1131 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	PMT2	P31382	759 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	MVD1	P32377	396 aa	Known RBP	5.19	□□□□□ -1.58
CYK3	YDL117W	PHO11	P35842	467 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	PHO12	P38693	467 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	VMA7	P39111	118 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	HXT13	P39924	564 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	GIM4	P40005	111 aa	Known RBP	5.19	□□□□□ -1.58
CYK3	YDL117W	ALG5	P40350	334 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	FMP32	P43557	207 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	YDL183C	P48569	320 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	YBP2	P53169	641 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	YPL034W	Q03083	165 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	WAR1	Q03631	944 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	SWF1	Q04629	336 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	REH1	Q06709	432 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	NUR1	Q12066	484 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	TUB1	P09733	447 aa	Known RBP	5.19	□□□□□ -1.58
CYK3	YDL117W	MBR1	P23493	339 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	TFC1	P32367	649 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	MOT2	P34909	587 aa	Known RBP	5.19	□□□□□ -1.58
CYK3	YDL117W	ANR2	P36090	516 aa	Predicted RBP	5.19	□□□□□ -1.58
CYK3	YDL117W	EDS1	P38073	919 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	PFF1	P38244	976 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	YBR238C	P38330	731 aa	Known RBP	5.19	□□□□□ -1.58
CYK3	YDL117W	SRP72	P38688	640 aa	Known RBP	5.19	□□□□□ -1.58
CYK3	YDL117W	RIM4	P38741	713 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	YHR054C	P38780	354 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	BOL3	P39724	118 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	CAB2	P40506	365 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	TDA10	P42938	290 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	GTO1	P48239	356 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	YML6	P51998	286 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	TMA20	P89886	181 aa	Predicted RBP	5.19	□□□□□ -1.58
CYK3	YDL117W	EAR1	Q03212	550 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	VHS1	Q03785	461 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	HRK1	Q08732	759 aa	Known RBP	5.19	□□□□□ -1.58
CYK3	YDL117W	ATG34	Q12292	412 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	RAD61	Q99359	647 aa		5.19	□□□□□ -1.58
CYK3	YDL117W	LEU4	P06208	619 aa	Known RBP	5.18	□□□□□ -1.58
CYK3	YDL117W	PRP2	P20095	876 aa	Predicted RBP	5.18	□□□□□ -1.58
CYK3	YDL117W	AMD2	P22580	549 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	RPI1	P23250	407 aa	Known RBP	5.18	□□□□□ -1.58
CYK3	YDL117W	SUR1	P33300	382 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	CDS1	P38221	457 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	SUL1	P38359	859 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	MNL1	P38888	796 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	BUD16	P39988	312 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
CYK3	YDL117W	TFG2	P41896	400 aa	Predicted RBP	5.18	□□□□□ -1.58
CYK3	YDL117W	RPN14	P53196	417 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	YGR012W	P53206	393 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	CAF40	P53829	373 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	CBK1	P53894	756 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	YMR027W	Q04371	470 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	GSF2	Q04697	403 aa	Known RBP	5.18	□□□□□ -1.58
CYK3	YDL117W	SPH1	Q06160	661 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	GYP1	Q08484	637 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	ADR1	P07248	1323 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	GCN4	P03069	281 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	PYC1	P11154	1178 aa	Known RBP	5.18	□□□□□ -1.58
CYK3	YDL117W	UTR1	P21373	530 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	GIT1	P25346	518 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	CHS3	P29465	1165 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	IMP2'	P32351	346 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	YBL055C	P34220	418 aa	Predicted RBP	5.18	□□□□□ -1.58
CYK3	YDL117W	NAT2	P37293	288 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	POL12	P38121	705 aa	Predicted RBP	5.18	□□□□□ -1.58
CYK3	YDL117W	PRS2	P38620	318 aa	Known RBP	5.18	□□□□□ -1.58
CYK3	YDL117W	UBP9	P39967	754 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	IDS2	P46958	469 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	NMD5	P46970	1048 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	BPL1	P48445	690 aa	Predicted RBP	5.18	□□□□□ -1.58
CYK3	YDL117W	YNR068C	P53754	272 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	YML131W	Q03102	365 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	MRPS17	Q03246	237 aa	Predicted RBP	5.18	□□□□□ -1.58
CYK3	YDL117W	YMR279C	Q03263	540 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	SNX41	Q04053	625 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	HCR1	Q05775	265 aa	Known RBP	5.18	□□□□□ -1.58
CYK3	YDL117W	CRR1	Q05790	422 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	YLR345W	Q06137	509 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	LUC7	Q07508	261 aa	Predicted RBP	5.18	□□□□□ -1.58
CYK3	YDL117W	CUE5	Q08412	411 aa	Known RBP	5.18	□□□□□ -1.58
CYK3	YDL117W	ESA1	Q08649	445 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	DCN1	Q12395	269 aa		5.18	□□□□□ -1.58
CYK3	YDL117W	PDR15	Q04182	1529 aa	Known RBP	5.17	□□□□□ -1.58
CYK3	YDL117W	PDC1	P06169	563 aa	Known RBP	5.17	□□□□□ -1.58
CYK3	YDL117W	PCK1	P10963	549 aa		5.17	□□□□□ -1.58
CYK3	YDL117W	PRI2	P20457	528 aa		5.17	□□□□□ -1.58
CYK3	YDL117W	SUI1	P32911	108 aa	Known RBP	5.17	□□□□□ -1.58
CYK3	YDL117W	YDR089W	P38966	869 aa		5.17	□□□□□ -1.58
CYK3	YDL117W	SKP2	P42843	763 aa		5.17	□□□□□ -1.58
CYK3	YDL117W	RPS7B	P48164	190 aa	Known RBP	5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 44.9 ms