RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Gm17416Q30KP4 66 aa7.38□□□□□ -1.23
Ssr1-204ENSMUST00000225319 Gm20537G3UYK7 97 aa7.34□□□□□ -1.24
Ssr1-204ENSMUST00000225319 Gm18596A0A1W2P860 280 aa7.33□□□□□ -1.24
Ssr1-204ENSMUST00000225319 Gm9955Q8CEJ8 102 aa7.29□□□□□ -1.24
Ssr1-204ENSMUST00000225319 Sec61bQ9CQS8 96 aaKnown RBP7.28□□□□□ -1.24
Ssr1-204ENSMUST00000225319 Gm17606F6ZL36 78 aa7.26□□□□□ -1.25
Ssr1-204ENSMUST00000225319 Gm3880A0A1B0GSB3 72 aa7.22□□□□□ -1.25
Ssr1-204ENSMUST00000225319 Gm10382Q3V0T5 144 aa7.19□□□□□ -1.26
Ssr1-204ENSMUST00000225319 Herc1E9PZP8 4859 aa7.19□□□□□ -1.26
Ssr1-204ENSMUST00000225319 2210017I01RikA0A0A6YVV1 95 aa7.15□□□□□ -1.27
Ssr1-204ENSMUST00000225319 Gm11563B1AQ90 168 aa7.15□□□□□ -1.27
Ssr1-204ENSMUST00000225319 2310057N15RikQ9D6T8 200 aa7.15□□□□□ -1.27
Ssr1-204ENSMUST00000225319 Krtap4-7Q9D732 168 aa7.15□□□□□ -1.27
Ssr1-204ENSMUST00000225319 A0A1Y7VJH8 109 aa7.11□□□□□ -1.27
Ssr1-204ENSMUST00000225319 Krtap3-1A2A591 98 aa7.11□□□□□ -1.27
Ssr1-204ENSMUST00000225319 Krtap13-1Q8K198 168 aa7.01□□□□□ -1.29
Ssr1-204ENSMUST00000225319 Gm9789Q8BIG3 52 aa7.01□□□□□ -1.29
Ssr1-204ENSMUST00000225319 Krtap16-3Q8C1I6 86 aa7.01□□□□□ -1.29
Ssr1-204ENSMUST00000225319 Prm1P02319 51 aa7□□□□□ -1.29
Ssr1-204ENSMUST00000225319 Krtap19-1Q925H2 87 aa6.98□□□□□ -1.29
Ssr1-204ENSMUST00000225319 Gm12216A0A1W2P827 62 aa6.96□□□□□ -1.3
Ssr1-204ENSMUST00000225319 Krtap1-5A2A590 122 aa6.95□□□□□ -1.3
Ssr1-204ENSMUST00000225319 Romo1P60603 79 aa6.95□□□□□ -1.3
Ssr1-204ENSMUST00000225319 Ush2AQ2QI47 5193 aa6.95□□□□□ -1.3
Ssr1-204ENSMUST00000225319 Fam229aB2KGE5 128 aa6.94□□□□□ -1.3
Ssr1-204ENSMUST00000225319 Gm7735D3YX18 52 aa6.93□□□□□ -1.3
Ssr1-204ENSMUST00000225319 Krtap19-3Q925H6 87 aa6.92□□□□□ -1.3
Ssr1-204ENSMUST00000225319 Gm11555B1AQ89 175 aa6.91□□□□□ -1.3
Ssr1-204ENSMUST00000225319 Hmcn2A2AJ76 5100 aa6.89□□□□□ -1.31
Ssr1-204ENSMUST00000225319 Crct1Q6PAI5 102 aa6.87□□□□□ -1.31
Ssr1-204ENSMUST00000225319 Krtap1-3A2A588 173 aa6.86□□□□□ -1.31
Ssr1-204ENSMUST00000225319 BC029722A0A0N4SW31 51 aa6.83□□□□□ -1.32
Ssr1-204ENSMUST00000225319 CriptO70333 101 aa6.79□□□□□ -1.32
Ssr1-204ENSMUST00000225319 B930094E09RikQ8C4T2 136 aa6.78□□□□□ -1.32
Ssr1-204ENSMUST00000225319 Krtap28-10A0A1Y7VP58 119 aa6.77□□□□□ -1.33
Ssr1-204ENSMUST00000225319 Gm19402J3QJV4 266 aa6.77□□□□□ -1.33
Ssr1-204ENSMUST00000225319 4932415D10RikA0A1W2P6U8 4986 aa6.77□□□□□ -1.33
Ssr1-204ENSMUST00000225319 Gm19426M0QWC7 77 aa6.75□□□□□ -1.33
Ssr1-204ENSMUST00000225319 Ubr4A2AN08 5180 aa6.73□□□□□ -1.33
Ssr1-204ENSMUST00000225319 Gm10318A0A1W2P728 225 aa6.73□□□□□ -1.33
Ssr1-204ENSMUST00000225319 Gm17402F6Z0L5 76 aa6.73□□□□□ -1.33
Ssr1-204ENSMUST00000225319 Krtap1-4Q3V2D6 188 aa6.69□□□□□ -1.34
Ssr1-204ENSMUST00000225319 ZanO88799 5376 aa6.69□□□□□ -1.34
Ssr1-204ENSMUST00000225319 Krtap4-2B1AQ85 167 aa6.68□□□□□ -1.34
Ssr1-204ENSMUST00000225319 Gm21887J3QQ04 176 aa6.67□□□□□ -1.34
Ssr1-204ENSMUST00000225319 LorP18165 486 aa6.61□□□□□ -1.35
Ssr1-204ENSMUST00000225319 Rnf213E9Q555 5152 aaKnown RBP6.55□□□□□ -1.36
Ssr1-204ENSMUST00000225319 A0A1Y7VLE6 161 aa6.54□□□□□ -1.36
Ssr1-204ENSMUST00000225319 Mp68P56379 58 aa6.51□□□□□ -1.37
Ssr1-204ENSMUST00000225319 Fat4Q2PZL6 4981 aa6.51□□□□□ -1.37
Ssr1-204ENSMUST00000225319 Sprr2a3Q4KL71 83 aa6.49□□□□□ -1.37
Ssr1-204ENSMUST00000225319 Sprr2a1Q9CQK8 83 aa6.49□□□□□ -1.37
Ssr1-204ENSMUST00000225319 Gm20538F6Z9R1 75 aa6.47□□□□□ -1.37
Ssr1-204ENSMUST00000225319 Krtap28-13A0A087WQP5 138 aa6.43□□□□□ -1.38
Ssr1-204ENSMUST00000225319 Spink7Q6IE32 76 aa6.41□□□□□ -1.38
Ssr1-204ENSMUST00000225319 Krtap7-1Q9D3I6 87 aa6.37□□□□□ -1.39
Ssr1-204ENSMUST00000225319 Gm40193A0A1B0GT39 78 aa6.36□□□□□ -1.39
Ssr1-204ENSMUST00000225319 Krtap12-1Q9Z287 130 aa6.33□□□□□ -1.4
Ssr1-204ENSMUST00000225319 Lce1jD3YUU5 139 aa6.32□□□□□ -1.4
Ssr1-204ENSMUST00000225319 SspoQ8CG65 4998 aa6.31□□□□□ -1.4
Ssr1-204ENSMUST00000225319 A030005L19RikA0A1Y7VIU2 113 aa6.31□□□□□ -1.4
Ssr1-204ENSMUST00000225319 Krtap17-1A2A5X6 109 aa6.28□□□□□ -1.4
Ssr1-204ENSMUST00000225319 Krtap19-9aF8WH65 55 aa6.26□□□□□ -1.41
Ssr1-204ENSMUST00000225319 Gm10061D3Z714 54 aa6.23□□□□□ -1.41
Ssr1-204ENSMUST00000225319 A030005K14RikA0A1Y7VNY1 122 aa6.21□□□□□ -1.42
Ssr1-204ENSMUST00000225319 Camk2n1Q6QWF9 78 aa6.17□□□□□ -1.42
Ssr1-204ENSMUST00000225319 Gm7544A0A1Y7VJ58 118 aa6.17□□□□□ -1.42
Ssr1-204ENSMUST00000225319 Krtap19-2Q925I0 141 aa6.17□□□□□ -1.42
Ssr1-204ENSMUST00000225319 Prm2P07978 107 aa6.12□□□□□ -1.43
Ssr1-204ENSMUST00000225319 Gm11562A0PK51 136 aa6.1□□□□□ -1.43
Ssr1-204ENSMUST00000225319 Krtap9-5A2A5X3 358 aa6.1□□□□□ -1.43
Ssr1-204ENSMUST00000225319 Gm19668J3QMD1 248 aa6.07□□□□□ -1.44
Ssr1-204ENSMUST00000225319 Ndufaf8A2AMZ4 74 aa6.03□□□□□ -1.44
Ssr1-204ENSMUST00000225319 Lce1iQ9D6P5 149 aa5.94□□□□□ -1.46
Ssr1-204ENSMUST00000225319 Gm11569B1AQB1 180 aa5.92□□□□□ -1.46
Ssr1-204ENSMUST00000225319 Krtap31-2Q8CAY5 177 aa5.88□□□□□ -1.47
Ssr1-204ENSMUST00000225319 Lce1a2Q9D1K4 149 aa5.86□□□□□ -1.47
Ssr1-204ENSMUST00000225319 Muc5bE9Q5I3 4800 aa5.84□□□□□ -1.47
Ssr1-204ENSMUST00000225319 Gm6358A0A087WPH4 74 aa5.82□□□□□ -1.48
Ssr1-204ENSMUST00000225319 Tnp1P10856 55 aa5.82□□□□□ -1.48
Ssr1-204ENSMUST00000225319 Lce1gQ9D195 139 aa5.81□□□□□ -1.48
Ssr1-204ENSMUST00000225319 Krtap8-1O08633 61 aa5.75□□□□□ -1.49
Ssr1-204ENSMUST00000225319 Krtap19-9bQ99NG9 58 aa5.69□□□□□ -1.5
Ssr1-204ENSMUST00000225319 Mt2P02798 61 aa5.67□□□□□ -1.5
Ssr1-204ENSMUST00000225319 A0A1Y7VJ07 166 aa5.59□□□□□ -1.51
Ssr1-204ENSMUST00000225319 Gm11596B1AQB0 205 aa5.59□□□□□ -1.52
Ssr1-204ENSMUST00000225319 Krtap31-1Q9D644 177 aa5.58□□□□□ -1.52
Ssr1-204ENSMUST00000225319 Syne2Q6ZWQ0 6874 aaKnown RBP5.55□□□□□ -1.52
Ssr1-204ENSMUST00000225319 2310046K23RikA0A0A6YVW6 87 aa5.54□□□□□ -1.52
Ssr1-204ENSMUST00000225319 A030003K21RikA0A1Y7VIM3 128 aa5.5□□□□□ -1.53
Ssr1-204ENSMUST00000225319 Krtap4-6Q3V4B7 195 aa5.48□□□□□ -1.53
Ssr1-204ENSMUST00000225319 Lce1hQ9D6R3 140 aa5.48□□□□□ -1.53
Ssr1-204ENSMUST00000225319 Gm9112A2AI92 75 aa5.4□□□□□ -1.55
Ssr1-204ENSMUST00000225319 Lce1bQ9D149 137 aa5.38□□□□□ -1.55
Ssr1-204ENSMUST00000225319 Krtap22-2J3QNX6 67 aa5.37□□□□□ -1.55
Ssr1-204ENSMUST00000225319 Mdn1A2ANY6 5589 aaKnown RBP5.37□□□□□ -1.55
Ssr1-204ENSMUST00000225319 Gm38119A0A0A6YX29 146 aa5.36□□□□□ -1.55
Ssr1-204ENSMUST00000225319 Krtap9-3Q3V2C1 136 aa5.32□□□□□ -1.56
Ssr1-204ENSMUST00000225319 A030014E15RikA0A1Y7VJV2 120 aa5.28□□□□□ -1.56
Ssr1-204ENSMUST00000225319 Gm11564A2A4L9 201 aa5.26□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 8 ms