RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Lce1mQ9CR91 182 aa4.47□□□□□ -1.69
Scn8a-208ENSMUST00000200963 Dnah17Q69Z23 4481 aa4.45□□□□□ -1.7
Scn8a-208ENSMUST00000200963 Muc4Q8JZM8 3443 aa4.44□□□□□ -1.7
Scn8a-208ENSMUST00000200963 Krtap9-5A2A5X3 358 aa4.44□□□□□ -1.7
Scn8a-208ENSMUST00000200963 Gm10272F7CZ33 110 aa4.43□□□□□ -1.7
Scn8a-208ENSMUST00000200963 Gm10100J3QK64 120 aa4.41□□□□□ -1.7
Scn8a-208ENSMUST00000200963 Csmd3Q80T79 3707 aa4.35□□□□□ -1.71
Scn8a-208ENSMUST00000200963 Lce3eF8VQJ0 98 aa4.34□□□□□ -1.71
Scn8a-208ENSMUST00000200963 Lce3fQ6PAI4 98 aa4.34□□□□□ -1.71
Scn8a-208ENSMUST00000200963 2310046K23RikA0A0A6YVW6 87 aa4.33□□□□□ -1.72
Scn8a-208ENSMUST00000200963 Dnah11E9Q7N9 4488 aa4.32□□□□□ -1.72
Scn8a-208ENSMUST00000200963 Lce3dE9Q8V1 98 aa4.32□□□□□ -1.72
Scn8a-208ENSMUST00000200963 Dnah2P0C6F1 4456 aa4.31□□□□□ -1.72
Scn8a-208ENSMUST00000200963 Dync2h1Q45VK7 4306 aa4.31□□□□□ -1.72
Scn8a-208ENSMUST00000200963 Gm10142J3KMP7 120 aa4.31□□□□□ -1.72
Scn8a-208ENSMUST00000200963 Krtap19-3Q925H6 87 aa4.31□□□□□ -1.72
Scn8a-208ENSMUST00000200963 Krtap16-3Q8C1I6 86 aa4.31□□□□□ -1.72
Scn8a-208ENSMUST00000200963 ApobE9Q414 4505 aa4.3□□□□□ -1.72
Scn8a-208ENSMUST00000200963 BsnO88737 3942 aa4.3□□□□□ -1.72
Scn8a-208ENSMUST00000200963 Hspg2Q05793 3707 aaKnown RBP4.3□□□□□ -1.72
Scn8a-208ENSMUST00000200963 Dnah1E9Q8T7 4250 aa4.29□□□□□ -1.72
Scn8a-208ENSMUST00000200963 Sprr2iO70560 76 aa4.28□□□□□ -1.72
Scn8a-208ENSMUST00000200963 Gm38119A0A0A6YX29 146 aa4.27□□□□□ -1.73
Scn8a-208ENSMUST00000200963 SacsQ9JLC8 4582 aa4.26□□□□□ -1.73
Scn8a-208ENSMUST00000200963 Fat1A0A1L1SQU7 4645 aa4.26□□□□□ -1.73
Scn8a-208ENSMUST00000200963 Dync1h1Q9JHU4 4644 aaKnown RBP4.25□□□□□ -1.73
Scn8a-208ENSMUST00000200963 Dnah3Q8BW94 4083 aa4.25□□□□□ -1.73
Scn8a-208ENSMUST00000200963 Lce3aQ497I5 98 aa4.23□□□□□ -1.73
Scn8a-208ENSMUST00000200963 Krtap22-2J3QNX6 67 aa4.21□□□□□ -1.73
Scn8a-208ENSMUST00000200963 Dnah7bL7N1Y0 4068 aa4.21□□□□□ -1.74
Scn8a-208ENSMUST00000200963 CubnQ9JLB4 3623 aa4.2□□□□□ -1.74
Scn8a-208ENSMUST00000200963 Lce1jD3YUU5 139 aa4.19□□□□□ -1.74
Scn8a-208ENSMUST00000200963 Lce1gQ9D195 139 aa4.19□□□□□ -1.74
Scn8a-208ENSMUST00000200963 Lce1iQ9D6P5 149 aa4.19□□□□□ -1.74
Scn8a-208ENSMUST00000200963 Lce1hQ9D6R3 140 aa4.19□□□□□ -1.74
Scn8a-208ENSMUST00000200963 Mt2P02798 61 aa4.19□□□□□ -1.74
Scn8a-208ENSMUST00000200963 Dnah9B1AR51 4484 aa4.19□□□□□ -1.74
Scn8a-208ENSMUST00000200963 Xirp2Q4U4S6 3784 aa4.16□□□□□ -1.74
Scn8a-208ENSMUST00000200963 Pkd1O08852 4293 aa4.15□□□□□ -1.74
Scn8a-208ENSMUST00000200963 TnxbO35452 4006 aa4.15□□□□□ -1.74
Scn8a-208ENSMUST00000200963 Krtap19-1Q925H2 87 aa4.15□□□□□ -1.74
Scn8a-208ENSMUST00000200963 Prm1P02319 51 aa4.15□□□□□ -1.75
Scn8a-208ENSMUST00000200963 Lrp1bQ9JI18 4599 aa4.12□□□□□ -1.75
Scn8a-208ENSMUST00000200963 PrkdcP97313 4128 aa4.12□□□□□ -1.75
Scn8a-208ENSMUST00000200963 Gm10024A0A0A0MQA4 119 aa4.07□□□□□ -1.76
Scn8a-208ENSMUST00000200963 Mycbp2Q7TPH6 4711 aa4.07□□□□□ -1.76
Scn8a-208ENSMUST00000200963 Sprr2fO70557 76 aa4.06□□□□□ -1.76
Scn8a-208ENSMUST00000200963 Ryr1E9PZQ0 5035 aa4.06□□□□□ -1.76
Scn8a-208ENSMUST00000200963 Dnah8Q91XQ0 4731 aa4.06□□□□□ -1.76
Scn8a-208ENSMUST00000200963 Lce1fB9EJP6 147 aa4.05□□□□□ -1.76
Scn8a-208ENSMUST00000200963 Lce1cQ9D1C5 147 aa4.05□□□□□ -1.76
Scn8a-208ENSMUST00000200963 Lce1lQ9D1G7 135 aa4.05□□□□□ -1.76
Scn8a-208ENSMUST00000200963 Lce1dQ9D731 133 aa4.05□□□□□ -1.76
Scn8a-208ENSMUST00000200963 Krtap19-2Q925I0 141 aa4.04□□□□□ -1.76
Scn8a-208ENSMUST00000200963 Lce1bQ9D149 137 aa4.03□□□□□ -1.77
Scn8a-208ENSMUST00000200963 Sprr2eO70556 76 aa4.02□□□□□ -1.77
Scn8a-208ENSMUST00000200963 Fras1Q80T14 4010 aa4□□□□□ -1.77
Scn8a-208ENSMUST00000200963 Dnah6E9Q0B6 4144 aa3.99□□□□□ -1.77
Scn8a-208ENSMUST00000200963 Lce1eQ9D139 143 aa3.98□□□□□ -1.77
Scn8a-208ENSMUST00000200963 Dnhd1D3Z2X2 4750 aa3.97□□□□□ -1.77
Scn8a-208ENSMUST00000200963 Kmt2aP55200 3966 aa3.97□□□□□ -1.77
Scn8a-208ENSMUST00000200963 Hectd4E9Q2E4 4418 aa3.96□□□□□ -1.77
Scn8a-208ENSMUST00000200963 Krtap1-3A2A588 173 aa3.96□□□□□ -1.78
Scn8a-208ENSMUST00000200963 Fat3Q8BNA6 4555 aa3.95□□□□□ -1.78
Scn8a-208ENSMUST00000200963 Gm7735D3YX18 52 aa3.94□□□□□ -1.78
Scn8a-208ENSMUST00000200963 Lrp1Q91ZX7 4545 aaKnown RBP3.93□□□□□ -1.78
Scn8a-208ENSMUST00000200963 Dnah7cA0A087WR13 4024 aa3.93□□□□□ -1.78
Scn8a-208ENSMUST00000200963 Dnah7aE9Q0T8 4024 aa3.88□□□□□ -1.79
Scn8a-208ENSMUST00000200963 Gm9789Q8BIG3 52 aa3.86□□□□□ -1.79
Scn8a-208ENSMUST00000200963 Herc1E9PZP8 4859 aa3.85□□□□□ -1.79
Scn8a-208ENSMUST00000200963 Gm11569B1AQB1 180 aa3.84□□□□□ -1.79
Scn8a-208ENSMUST00000200963 Krtap19-4Q925H7 84 aa3.83□□□□□ -1.8
Scn8a-208ENSMUST00000200963 Krtap9-3Q3V2C1 136 aa3.83□□□□□ -1.8
Scn8a-208ENSMUST00000200963 Gm10061D3Z714 54 aa3.82□□□□□ -1.8
Scn8a-208ENSMUST00000200963 Ryr2E9Q401 4966 aaKnown RBP3.79□□□□□ -1.8
Scn8a-208ENSMUST00000200963 Mt4P47945 62 aa3.78□□□□□ -1.8
Scn8a-208ENSMUST00000200963 Vps13bQ80TY5 3993 aa3.76□□□□□ -1.81
Scn8a-208ENSMUST00000200963 Fat2Q5F226 4351 aa3.75□□□□□ -1.81
Scn8a-208ENSMUST00000200963 Ryr3A2AGL3 4863 aa3.68□□□□□ -1.82
Scn8a-208ENSMUST00000200963 Herc2Q4U2R1 4836 aa3.67□□□□□ -1.82
Scn8a-208ENSMUST00000200963 Krtap4-2B1AQ85 167 aa3.67□□□□□ -1.82
Scn8a-208ENSMUST00000200963 Krtap4-6Q3V4B7 195 aa3.64□□□□□ -1.83
Scn8a-208ENSMUST00000200963 Lrp2A2ARV4 4660 aa3.61□□□□□ -1.83
Scn8a-208ENSMUST00000200963 PcloQ9QYX7 5068 aa3.58□□□□□ -1.84
Scn8a-208ENSMUST00000200963 HydinQ80W93 5154 aa3.57□□□□□ -1.84
Scn8a-208ENSMUST00000200963 Kmt2cQ8BRH4 4903 aa3.57□□□□□ -1.84
Scn8a-208ENSMUST00000200963 Kiaa1109A2AAE1 5005 aa3.56□□□□□ -1.84
Scn8a-208ENSMUST00000200963 Pkhd1E9PZ36 4059 aa3.56□□□□□ -1.84
Scn8a-208ENSMUST00000200963 Lce1a2Q9D1K4 149 aa3.55□□□□□ -1.84
Scn8a-208ENSMUST00000200963 Krtap31-1Q9D644 177 aa3.53□□□□□ -1.84
Scn8a-208ENSMUST00000200963 Sprr2hO70559 108 aa3.48□□□□□ -1.85
Scn8a-208ENSMUST00000200963 Krtap4-1Q3UUY3 169 aa3.48□□□□□ -1.85
Scn8a-208ENSMUST00000200963 Gm11562A0PK51 136 aa3.46□□□□□ -1.86
Scn8a-208ENSMUST00000200963 2300003K06RikA2A4M0 262 aa3.46□□□□□ -1.86
Scn8a-208ENSMUST00000200963 Pkhd1l1Q80ZA4 4249 aa3.45□□□□□ -1.86
Scn8a-208ENSMUST00000200963 Gm11596B1AQB0 205 aa3.41□□□□□ -1.86
Scn8a-208ENSMUST00000200963 Sprr2dO70555 85 aa3.41□□□□□ -1.86
Scn8a-208ENSMUST00000200963 Krtap4-7Q9D732 168 aa3.41□□□□□ -1.86
Scn8a-208ENSMUST00000200963 Birc6O88738 4882 aa3.41□□□□□ -1.86
Scn8a-208ENSMUST00000200963 Gm11564A2A4L9 201 aa3.4□□□□□ -1.86
Retrieved 100 of 22,080 RNA–protein pairs in 81.6 ms