RNA–Protein interactions for RNA: ENSMUST00000172775.3

Msx3-202, Transcript of Homeobox protein MSX-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msx3, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-202ENSMUST00000172775 Krtap3-1A2A591 98 aa10.42□□□□□ -0.74
Msx3-202ENSMUST00000172775 2310057N15RikQ9D6T8 200 aa10.4□□□□□ -0.74
Msx3-202ENSMUST00000172775 Ndufs5Q99LY9 106 aa10.39□□□□□ -0.75
Msx3-202ENSMUST00000172775 Gm10382Q3V0T5 144 aa10.38□□□□□ -0.75
Msx3-202ENSMUST00000172775 Lce1mQ9CR91 182 aa10.35□□□□□ -0.75
Msx3-202ENSMUST00000172775 Gm9955Q8CEJ8 102 aa10.32□□□□□ -0.76
Msx3-202ENSMUST00000172775 Krtap13-1Q8K198 168 aa10.27□□□□□ -0.77
Msx3-202ENSMUST00000172775 Gm11563B1AQ90 168 aa10.26□□□□□ -0.77
Msx3-202ENSMUST00000172775 Krtap4-7Q9D732 168 aa10.26□□□□□ -0.77
Msx3-202ENSMUST00000172775 Gm11555B1AQ89 175 aa10.24□□□□□ -0.77
Msx3-202ENSMUST00000172775 Gm20537G3UYK7 97 aa10.23□□□□□ -0.77
Msx3-202ENSMUST00000172775 Fam229aB2KGE5 128 aa10.18□□□□□ -0.78
Msx3-202ENSMUST00000172775 Herc1E9PZP8 4859 aa10.13□□□□□ -0.79
Msx3-202ENSMUST00000172775 Krtap1-5A2A590 122 aa10.11□□□□□ -0.79
Msx3-202ENSMUST00000172775 BC029722A0A0N4SW31 51 aa10.08□□□□□ -0.8
Msx3-202ENSMUST00000172775 Pla2g10Q9QXX3 151 aa10.06□□□□□ -0.8
Msx3-202ENSMUST00000172775 Krtap16-3Q8C1I6 86 aa10.06□□□□□ -0.8
Msx3-202ENSMUST00000172775 Gm3880A0A1B0GSB3 72 aa9.98□□□□□ -0.81
Msx3-202ENSMUST00000172775 1700042G07RikB1AUF7 90 aa9.98□□□□□ -0.81
Msx3-202ENSMUST00000172775 Krtap19-1Q925H2 87 aa9.97□□□□□ -0.81
Msx3-202ENSMUST00000172775 Crct1Q6PAI5 102 aa9.92□□□□□ -0.82
Msx3-202ENSMUST00000172775 Krtap19-3Q925H6 87 aa9.91□□□□□ -0.82
Msx3-202ENSMUST00000172775 Gm18596A0A1W2P860 280 aa9.84□□□□□ -0.83
Msx3-202ENSMUST00000172775 Ush2AQ2QI47 5193 aa9.81□□□□□ -0.84
Msx3-202ENSMUST00000172775 Gm10318A0A1W2P728 225 aa9.81□□□□□ -0.84
Msx3-202ENSMUST00000172775 Gm9789Q8BIG3 52 aa9.77□□□□□ -0.85
Msx3-202ENSMUST00000172775 Gm19426M0QWC7 77 aa9.75□□□□□ -0.85
Msx3-202ENSMUST00000172775 Hmcn2A2AJ76 5100 aa9.75□□□□□ -0.85
Msx3-202ENSMUST00000172775 Gm17402F6Z0L5 76 aa9.75□□□□□ -0.85
Msx3-202ENSMUST00000172775 Prm1P02319 51 aa9.74□□□□□ -0.85
Msx3-202ENSMUST00000172775 Krtap1-3A2A588 173 aa9.72□□□□□ -0.85
Msx3-202ENSMUST00000172775 Gm19402J3QJV4 266 aa9.72□□□□□ -0.85
Msx3-202ENSMUST00000172775 B930094E09RikQ8C4T2 136 aa9.69□□□□□ -0.86
Msx3-202ENSMUST00000172775 Gm12216A0A1W2P827 62 aa9.67□□□□□ -0.86
Msx3-202ENSMUST00000172775 Gm7735D3YX18 52 aa9.63□□□□□ -0.87
Msx3-202ENSMUST00000172775 Romo1P60603 79 aa9.57□□□□□ -0.88
Msx3-202ENSMUST00000172775 Spink7Q6IE32 76 aa9.56□□□□□ -0.88
Msx3-202ENSMUST00000172775 Ubr4A2AN08 5180 aa9.56□□□□□ -0.88
Msx3-202ENSMUST00000172775 ZanO88799 5376 aa9.55□□□□□ -0.88
Msx3-202ENSMUST00000172775 CriptO70333 101 aa9.52□□□□□ -0.88
Msx3-202ENSMUST00000172775 4932415D10RikA0A1W2P6U8 4986 aa9.52□□□□□ -0.89
Msx3-202ENSMUST00000172775 Krtap1-4Q3V2D6 188 aa9.51□□□□□ -0.89
Msx3-202ENSMUST00000172775 Sprr2a3Q4KL71 83 aa9.46□□□□□ -0.89
Msx3-202ENSMUST00000172775 Sprr2a1Q9CQK8 83 aa9.46□□□□□ -0.89
Msx3-202ENSMUST00000172775 LorP18165 486 aa9.45□□□□□ -0.9
Msx3-202ENSMUST00000172775 Rnf213E9Q555 5152 aaKnown RBP9.32□□□□□ -0.92
Msx3-202ENSMUST00000172775 Gm21887J3QQ04 176 aa9.28□□□□□ -0.92
Msx3-202ENSMUST00000172775 Krtap4-2B1AQ85 167 aa9.25□□□□□ -0.93
Msx3-202ENSMUST00000172775 Fat4Q2PZL6 4981 aa9.23□□□□□ -0.93
Msx3-202ENSMUST00000172775 Krtap12-1Q9Z287 130 aa9.17□□□□□ -0.94
Msx3-202ENSMUST00000172775 Lce1jD3YUU5 139 aa9.13□□□□□ -0.95
Msx3-202ENSMUST00000172775 Krtap19-9aF8WH65 55 aa9.12□□□□□ -0.95
Msx3-202ENSMUST00000172775 Gm19668J3QMD1 248 aa8.97□□□□□ -0.97
Msx3-202ENSMUST00000172775 Camk2n1Q6QWF9 78 aa8.96□□□□□ -0.97
Msx3-202ENSMUST00000172775 SspoQ8CG65 4998 aa8.93□□□□□ -0.98
Msx3-202ENSMUST00000172775 Prm2P07978 107 aa8.88□□□□□ -0.99
Msx3-202ENSMUST00000172775 Krtap19-2Q925I0 141 aa8.81□□□□□ -1
Msx3-202ENSMUST00000172775 A0A1Y7VJH8 109 aa8.79□□□□□ -1
Msx3-202ENSMUST00000172775 Krtap9-5A2A5X3 358 aa8.76□□□□□ -1.01
Msx3-202ENSMUST00000172775 Gm10061D3Z714 54 aa8.76□□□□□ -1.01
Msx3-202ENSMUST00000172775 Gm40193A0A1B0GT39 78 aa8.71□□□□□ -1.02
Msx3-202ENSMUST00000172775 Krtap17-1A2A5X6 109 aa8.71□□□□□ -1.02
Msx3-202ENSMUST00000172775 Krtap7-1Q9D3I6 87 aa8.69□□□□□ -1.02
Msx3-202ENSMUST00000172775 Mp68P56379 58 aa8.6□□□□□ -1.03
Msx3-202ENSMUST00000172775 Lce1iQ9D6P5 149 aa8.58□□□□□ -1.04
Msx3-202ENSMUST00000172775 A0A1Y7VLE6 161 aa8.53□□□□□ -1.04
Msx3-202ENSMUST00000172775 Krtap28-13A0A087WQP5 138 aa8.49□□□□□ -1.05
Msx3-202ENSMUST00000172775 Krtap28-10A0A1Y7VP58 119 aa8.48□□□□□ -1.05
Msx3-202ENSMUST00000172775 Lce1a2Q9D1K4 149 aa8.48□□□□□ -1.05
Msx3-202ENSMUST00000172775 Krtap8-1O08633 61 aa8.45□□□□□ -1.06
Msx3-202ENSMUST00000172775 Krtap19-9bQ99NG9 58 aa8.38□□□□□ -1.07
Msx3-202ENSMUST00000172775 A030005K14RikA0A1Y7VNY1 122 aa8.36□□□□□ -1.07
Msx3-202ENSMUST00000172775 Muc5bE9Q5I3 4800 aa8.36□□□□□ -1.07
Msx3-202ENSMUST00000172775 Gm6358A0A087WPH4 74 aa8.31□□□□□ -1.08
Msx3-202ENSMUST00000172775 Tnp1P10856 55 aa8.26□□□□□ -1.09
Msx3-202ENSMUST00000172775 Gm11569B1AQB1 180 aa8.25□□□□□ -1.09
Msx3-202ENSMUST00000172775 Mt2P02798 61 aa8.18□□□□□ -1.1
Msx3-202ENSMUST00000172775 Gm20538F6Z9R1 75 aa8□□□□□ -1.13
Msx3-202ENSMUST00000172775 Krtap9-3Q3V2C1 136 aa7.82□□□□□ -1.16
Msx3-202ENSMUST00000172775 2310046K23RikA0A0A6YVW6 87 aa7.8□□□□□ -1.16
Msx3-202ENSMUST00000172775 Lce1hQ9D6R3 140 aa7.77□□□□□ -1.17
Msx3-202ENSMUST00000172775 Krtap22-2J3QNX6 67 aa7.75□□□□□ -1.17
Msx3-202ENSMUST00000172775 Ndufaf8A2AMZ4 74 aa7.71□□□□□ -1.18
Msx3-202ENSMUST00000172775 A0A1Y7VJ07 166 aa7.67□□□□□ -1.18
Msx3-202ENSMUST00000172775 Mdn1A2ANY6 5589 aaKnown RBP7.61□□□□□ -1.19
Msx3-202ENSMUST00000172775 A030005L19RikA0A1Y7VIU2 113 aa7.61□□□□□ -1.19
Msx3-202ENSMUST00000172775 A030014E15RikA0A1Y7VJV2 120 aa7.58□□□□□ -1.2
Msx3-202ENSMUST00000172775 Gm7544A0A1Y7VJ58 118 aa7.55□□□□□ -1.2
Msx3-202ENSMUST00000172775 Gm38119A0A0A6YX29 146 aa7.53□□□□□ -1.2
Msx3-202ENSMUST00000172775 Krtap4-6Q3V4B7 195 aa7.49□□□□□ -1.21
Msx3-202ENSMUST00000172775 Lce1gQ9D195 139 aa7.49□□□□□ -1.21
Msx3-202ENSMUST00000172775 Gm11562A0PK51 136 aa7.32□□□□□ -1.24
Msx3-202ENSMUST00000172775 Gm11596B1AQB0 205 aa7.28□□□□□ -1.24
Msx3-202ENSMUST00000172775 Gm10272F7CZ33 110 aa7.24□□□□□ -1.25
Msx3-202ENSMUST00000172775 Lce1a1Q9CQH5 143 aa7.2□□□□□ -1.26
Msx3-202ENSMUST00000172775 Syne2Q6ZWQ0 6874 aaKnown RBP7.19□□□□□ -1.26
Msx3-202ENSMUST00000172775 Gm11564A2A4L9 201 aa7.13□□□□□ -1.27
Msx3-202ENSMUST00000172775 Gm11595B1AQA7 289 aa7.13□□□□□ -1.27
Msx3-202ENSMUST00000172775 Krtap4-8B1AQA8 209 aa7.13□□□□□ -1.27
Msx3-202ENSMUST00000172775 Lce1dQ9D731 133 aa7.03□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 51.2 ms