RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Ryr2E9Q401 4966 aaKnown RBP8.69□□□□□ -1.02
Ckap4-202ENSMUST00000167671 Gm21887J3QQ04 176 aa8.69□□□□□ -1.02
Ckap4-202ENSMUST00000167671 Gm17416Q30KP4 66 aa8.67□□□□□ -1.02
Ckap4-202ENSMUST00000167671 2210017I01RikA0A0A6YVV1 95 aa8.55□□□□□ -1.04
Ckap4-202ENSMUST00000167671 Gm19426M0QWC7 77 aa8.53□□□□□ -1.04
Ckap4-202ENSMUST00000167671 B930094E09RikQ8C4T2 136 aa8.48□□□□□ -1.05
Ckap4-202ENSMUST00000167671 Ryr1E9PZQ0 5035 aa8.48□□□□□ -1.05
Ckap4-202ENSMUST00000167671 2310057N15RikQ9D6T8 200 aa8.46□□□□□ -1.05
Ckap4-202ENSMUST00000167671 BC029722A0A0N4SW31 51 aa8.4□□□□□ -1.07
Ckap4-202ENSMUST00000167671 Krtap13-1Q8K198 168 aa8.38□□□□□ -1.07
Ckap4-202ENSMUST00000167671 Kiaa1109A2AAE1 5005 aa8.29□□□□□ -1.08
Ckap4-202ENSMUST00000167671 HydinQ80W93 5154 aa8.28□□□□□ -1.08
Ckap4-202ENSMUST00000167671 Gm19402J3QJV4 266 aa8.24□□□□□ -1.09
Ckap4-202ENSMUST00000167671 Ndufaf8A2AMZ4 74 aa8.22□□□□□ -1.09
Ckap4-202ENSMUST00000167671 Krtap7-1Q9D3I6 87 aa8.22□□□□□ -1.09
Ckap4-202ENSMUST00000167671 Lrp2A2ARV4 4660 aa8.21□□□□□ -1.09
Ckap4-202ENSMUST00000167671 Herc2Q4U2R1 4836 aa8.21□□□□□ -1.1
Ckap4-202ENSMUST00000167671 Dnhd1D3Z2X2 4750 aa8.14□□□□□ -1.11
Ckap4-202ENSMUST00000167671 Gm10318A0A1W2P728 225 aa8.13□□□□□ -1.11
Ckap4-202ENSMUST00000167671 Gm17402F6Z0L5 76 aa8.08□□□□□ -1.12
Ckap4-202ENSMUST00000167671 Krtap1-5A2A590 122 aa8.07□□□□□ -1.12
Ckap4-202ENSMUST00000167671 Spink7Q6IE32 76 aa8.06□□□□□ -1.12
Ckap4-202ENSMUST00000167671 Gm19668J3QMD1 248 aa8.04□□□□□ -1.12
Ckap4-202ENSMUST00000167671 Sec61bQ9CQS8 96 aaKnown RBP8.03□□□□□ -1.12
Ckap4-202ENSMUST00000167671 Crct1Q6PAI5 102 aa8.01□□□□□ -1.13
Ckap4-202ENSMUST00000167671 Fam229aB2KGE5 128 aa8□□□□□ -1.13
Ckap4-202ENSMUST00000167671 Birc6O88738 4882 aa7.97□□□□□ -1.13
Ckap4-202ENSMUST00000167671 Prm2P07978 107 aa7.95□□□□□ -1.14
Ckap4-202ENSMUST00000167671 Sprr2a3Q4KL71 83 aa7.95□□□□□ -1.14
Ckap4-202ENSMUST00000167671 Sprr2a1Q9CQK8 83 aa7.95□□□□□ -1.14
Ckap4-202ENSMUST00000167671 Gm40193A0A1B0GT39 78 aa7.9□□□□□ -1.15
Ckap4-202ENSMUST00000167671 PcloQ9QYX7 5068 aa7.89□□□□□ -1.15
Ckap4-202ENSMUST00000167671 Krtap16-3Q8C1I6 86 aa7.85□□□□□ -1.15
Ckap4-202ENSMUST00000167671 Camk2n1Q6QWF9 78 aa7.74□□□□□ -1.17
Ckap4-202ENSMUST00000167671 Krtap19-1Q925H2 87 aa7.69□□□□□ -1.18
Ckap4-202ENSMUST00000167671 Krtap19-3Q925H6 87 aa7.65□□□□□ -1.18
Ckap4-202ENSMUST00000167671 Krtap1-4Q3V2D6 188 aa7.59□□□□□ -1.19
Ckap4-202ENSMUST00000167671 Ubr4A2AN08 5180 aa7.53□□□□□ -1.2
Ckap4-202ENSMUST00000167671 Herc1E9PZP8 4859 aa7.52□□□□□ -1.21
Ckap4-202ENSMUST00000167671 ZanO88799 5376 aa7.49□□□□□ -1.21
Ckap4-202ENSMUST00000167671 4932415D10RikA0A1W2P6U8 4986 aa7.45□□□□□ -1.22
Ckap4-202ENSMUST00000167671 Fat4Q2PZL6 4981 aa7.44□□□□□ -1.22
Ckap4-202ENSMUST00000167671 Gm9112A2AI92 75 aa7.44□□□□□ -1.22
Ckap4-202ENSMUST00000167671 Lce1jD3YUU5 139 aa7.37□□□□□ -1.23
Ckap4-202ENSMUST00000167671 Tnp1P10856 55 aa7.28□□□□□ -1.24
Ckap4-202ENSMUST00000167671 Krtap12-1Q9Z287 130 aa7.21□□□□□ -1.26
Ckap4-202ENSMUST00000167671 Ush2AQ2QI47 5193 aa7.21□□□□□ -1.26
Ckap4-202ENSMUST00000167671 Hmcn2A2AJ76 5100 aa7.19□□□□□ -1.26
Ckap4-202ENSMUST00000167671 Krtap19-9aF8WH65 55 aa7.18□□□□□ -1.26
Ckap4-202ENSMUST00000167671 Krtap1-3A2A588 173 aa7.18□□□□□ -1.26
Ckap4-202ENSMUST00000167671 Lce1mQ9CR91 182 aa7.16□□□□□ -1.26
Ckap4-202ENSMUST00000167671 LorP18165 486 aa7.15□□□□□ -1.26
Ckap4-202ENSMUST00000167671 Krtap17-1A2A5X6 109 aa7.09□□□□□ -1.27
Ckap4-202ENSMUST00000167671 Rnf213E9Q555 5152 aaKnown RBP7.06□□□□□ -1.28
Ckap4-202ENSMUST00000167671 Krtap8-1O08633 61 aa6.93□□□□□ -1.3
Ckap4-202ENSMUST00000167671 Lce1iQ9D6P5 149 aa6.89□□□□□ -1.31
Ckap4-202ENSMUST00000167671 Gm18596A0A1W2P860 280 aa6.86□□□□□ -1.31
Ckap4-202ENSMUST00000167671 Lce1a2Q9D1K4 149 aa6.86□□□□□ -1.31
Ckap4-202ENSMUST00000167671 Krtap19-9bQ99NG9 58 aa6.83□□□□□ -1.32
Ckap4-202ENSMUST00000167671 2310046K23RikA0A0A6YVW6 87 aa6.81□□□□□ -1.32
Ckap4-202ENSMUST00000167671 Krtap9-3Q3V2C1 136 aa6.8□□□□□ -1.32
Ckap4-202ENSMUST00000167671 Gm9789Q8BIG3 52 aa6.75□□□□□ -1.33
Ckap4-202ENSMUST00000167671 Krtap9-5A2A5X3 358 aa6.74□□□□□ -1.33
Ckap4-202ENSMUST00000167671 Krtap19-2Q925I0 141 aa6.74□□□□□ -1.33
Ckap4-202ENSMUST00000167671 Lce1hQ9D6R3 140 aa6.68□□□□□ -1.34
Ckap4-202ENSMUST00000167671 Prm1P02319 51 aa6.66□□□□□ -1.34
Ckap4-202ENSMUST00000167671 Gm7735D3YX18 52 aa6.64□□□□□ -1.35
Ckap4-202ENSMUST00000167671 SspoQ8CG65 4998 aa6.58□□□□□ -1.36
Ckap4-202ENSMUST00000167671 Lce1dQ9D731 133 aa6.4□□□□□ -1.39
Ckap4-202ENSMUST00000167671 Mt2P02798 61 aa6.36□□□□□ -1.39
Ckap4-202ENSMUST00000167671 Gm6358A0A087WPH4 74 aa6.3□□□□□ -1.4
Ckap4-202ENSMUST00000167671 Muc5bE9Q5I3 4800 aa6.24□□□□□ -1.41
Ckap4-202ENSMUST00000167671 Gm10061D3Z714 54 aa6.17□□□□□ -1.42
Ckap4-202ENSMUST00000167671 Lce1eQ9D139 143 aa6.16□□□□□ -1.42
Ckap4-202ENSMUST00000167671 Sprr2gO70558 76 aa6.12□□□□□ -1.43
Ckap4-202ENSMUST00000167671 4933428G20RikQ9D3X4 101 aa6.07□□□□□ -1.44
Ckap4-202ENSMUST00000167671 Gm10272F7CZ33 110 aa6.06□□□□□ -1.44
Ckap4-202ENSMUST00000167671 Gm11938Q9D3H4 131 aa6.05□□□□□ -1.44
Ckap4-202ENSMUST00000167671 Krtap4-1Q3UUY3 169 aa6.02□□□□□ -1.45
Ckap4-202ENSMUST00000167671 Sprr2dO70555 85 aa5.95□□□□□ -1.46
Ckap4-202ENSMUST00000167671 Krtap22-2J3QNX6 67 aa5.93□□□□□ -1.46
Ckap4-202ENSMUST00000167671 Mdn1A2ANY6 5589 aaKnown RBP5.9□□□□□ -1.47
Ckap4-202ENSMUST00000167671 Lce1cQ9D1C5 147 aa5.87□□□□□ -1.47
Ckap4-202ENSMUST00000167671 Gm11569B1AQB1 180 aa5.74□□□□□ -1.49
Ckap4-202ENSMUST00000167671 Gm11562A0PK51 136 aa5.69□□□□□ -1.5
Ckap4-202ENSMUST00000167671 Gm10100J3QK64 120 aa5.67□□□□□ -1.5
Ckap4-202ENSMUST00000167671 Lce1fB9EJP6 147 aa5.66□□□□□ -1.5
Ckap4-202ENSMUST00000167671 Lce1a1Q9CQH5 143 aa5.66□□□□□ -1.5
Ckap4-202ENSMUST00000167671 Lce3bQ9CQM7 98 aa5.64□□□□□ -1.51
Ckap4-202ENSMUST00000167671 Gm11563B1AQ90 168 aa5.63□□□□□ -1.51
Ckap4-202ENSMUST00000167671 Krtap4-7Q9D732 168 aa5.63□□□□□ -1.51
Ckap4-202ENSMUST00000167671 Syne1Q6ZWR6 8799 aa5.56□□□□□ -1.52
Ckap4-202ENSMUST00000167671 Gm10142J3KMP7 120 aa5.55□□□□□ -1.52
Ckap4-202ENSMUST00000167671 Krtap19-4Q925H7 84 aa5.54□□□□□ -1.52
Ckap4-202ENSMUST00000167671 Gm11555B1AQ89 175 aa5.46□□□□□ -1.54
Ckap4-202ENSMUST00000167671 Lce3cQ91V05 98 aa5.42□□□□□ -1.54
Ckap4-202ENSMUST00000167671 Lce3dE9Q8V1 98 aa5.38□□□□□ -1.55
Ckap4-202ENSMUST00000167671 Sprr2iO70560 76 aa5.32□□□□□ -1.56
Ckap4-202ENSMUST00000167671 Sprr2hO70559 108 aa5.28□□□□□ -1.56
Ckap4-202ENSMUST00000167671 Lce3eF8VQJ0 98 aa5.25□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms