RNA–Protein interactions for RNA: ENSMUST00000113542.8

Scfd2-203, Transcript of Sec1 family domain-containing protein 2, mousemouse

TSL 1 (best) BASIC

Gene Scfd2, Length 2,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd2-203ENSMUST00000113542 Krtap3-1A2A591 98 aa6.95□□□□□ -1.3
Scfd2-203ENSMUST00000113542 Romo1P60603 79 aa6.91□□□□□ -1.3
Scfd2-203ENSMUST00000113542 Dnhd1D3Z2X2 4750 aa6.86□□□□□ -1.31
Scfd2-203ENSMUST00000113542 2210017I01RikA0A0A6YVV1 95 aa6.85□□□□□ -1.31
Scfd2-203ENSMUST00000113542 Kiaa1109A2AAE1 5005 aa6.82□□□□□ -1.32
Scfd2-203ENSMUST00000113542 Herc2Q4U2R1 4836 aa6.81□□□□□ -1.32
Scfd2-203ENSMUST00000113542 HydinQ80W93 5154 aa6.77□□□□□ -1.33
Scfd2-203ENSMUST00000113542 Birc6O88738 4882 aa6.74□□□□□ -1.33
Scfd2-203ENSMUST00000113542 CriptO70333 101 aa6.72□□□□□ -1.33
Scfd2-203ENSMUST00000113542 Krtap13-1Q8K198 168 aa6.67□□□□□ -1.34
Scfd2-203ENSMUST00000113542 Lrp2A2ARV4 4660 aa6.67□□□□□ -1.34
Scfd2-203ENSMUST00000113542 2310057N15RikQ9D6T8 200 aa6.62□□□□□ -1.35
Scfd2-203ENSMUST00000113542 BC029722A0A0N4SW31 51 aa6.59□□□□□ -1.35
Scfd2-203ENSMUST00000113542 Prm2P07978 107 aa6.59□□□□□ -1.36
Scfd2-203ENSMUST00000113542 B930094E09RikQ8C4T2 136 aa6.57□□□□□ -1.36
Scfd2-203ENSMUST00000113542 Gm21887J3QQ04 176 aa6.55□□□□□ -1.36
Scfd2-203ENSMUST00000113542 Sec61bQ9CQS8 96 aaKnown RBP6.54□□□□□ -1.36
Scfd2-203ENSMUST00000113542 Krtap1-5A2A590 122 aa6.53□□□□□ -1.36
Scfd2-203ENSMUST00000113542 Gm19426M0QWC7 77 aa6.52□□□□□ -1.37
Scfd2-203ENSMUST00000113542 PcloQ9QYX7 5068 aa6.5□□□□□ -1.37
Scfd2-203ENSMUST00000113542 Gm17402F6Z0L5 76 aa6.45□□□□□ -1.38
Scfd2-203ENSMUST00000113542 Krtap16-3Q8C1I6 86 aa6.4□□□□□ -1.38
Scfd2-203ENSMUST00000113542 Ndufaf8A2AMZ4 74 aa6.39□□□□□ -1.39
Scfd2-203ENSMUST00000113542 Gm19402J3QJV4 266 aa6.38□□□□□ -1.39
Scfd2-203ENSMUST00000113542 Fam229aB2KGE5 128 aa6.33□□□□□ -1.4
Scfd2-203ENSMUST00000113542 Gm10318A0A1W2P728 225 aa6.32□□□□□ -1.4
Scfd2-203ENSMUST00000113542 Crct1Q6PAI5 102 aa6.32□□□□□ -1.4
Scfd2-203ENSMUST00000113542 Krtap19-1Q925H2 87 aa6.32□□□□□ -1.4
Scfd2-203ENSMUST00000113542 Sprr2a3Q4KL71 83 aa6.3□□□□□ -1.4
Scfd2-203ENSMUST00000113542 Sprr2a1Q9CQK8 83 aa6.3□□□□□ -1.4
Scfd2-203ENSMUST00000113542 Herc1E9PZP8 4859 aa6.29□□□□□ -1.4
Scfd2-203ENSMUST00000113542 Krtap19-3Q925H6 87 aa6.26□□□□□ -1.41
Scfd2-203ENSMUST00000113542 Krtap7-1Q9D3I6 87 aa6.24□□□□□ -1.41
Scfd2-203ENSMUST00000113542 Spink7Q6IE32 76 aa6.21□□□□□ -1.42
Scfd2-203ENSMUST00000113542 Lce1mQ9CR91 182 aa6.19□□□□□ -1.42
Scfd2-203ENSMUST00000113542 Krtap1-4Q3V2D6 188 aa6.11□□□□□ -1.43
Scfd2-203ENSMUST00000113542 Gm40193A0A1B0GT39 78 aa6.07□□□□□ -1.44
Scfd2-203ENSMUST00000113542 Gm9112A2AI92 75 aa6.02□□□□□ -1.45
Scfd2-203ENSMUST00000113542 ZanO88799 5376 aa6.01□□□□□ -1.45
Scfd2-203ENSMUST00000113542 Gm18596A0A1W2P860 280 aa6□□□□□ -1.45
Scfd2-203ENSMUST00000113542 Ubr4A2AN08 5180 aa6□□□□□ -1.45
Scfd2-203ENSMUST00000113542 Ush2AQ2QI47 5193 aa6□□□□□ -1.45
Scfd2-203ENSMUST00000113542 Hmcn2A2AJ76 5100 aa6□□□□□ -1.45
Scfd2-203ENSMUST00000113542 4932415D10RikA0A1W2P6U8 4986 aa5.99□□□□□ -1.45
Scfd2-203ENSMUST00000113542 Krtap1-3A2A588 173 aa5.98□□□□□ -1.45
Scfd2-203ENSMUST00000113542 Gm19668J3QMD1 248 aa5.97□□□□□ -1.45
Scfd2-203ENSMUST00000113542 Camk2n1Q6QWF9 78 aa5.94□□□□□ -1.46
Scfd2-203ENSMUST00000113542 Fat4Q2PZL6 4981 aa5.93□□□□□ -1.46
Scfd2-203ENSMUST00000113542 Lce1jD3YUU5 139 aa5.91□□□□□ -1.46
Scfd2-203ENSMUST00000113542 Krtap12-1Q9Z287 130 aa5.83□□□□□ -1.48
Scfd2-203ENSMUST00000113542 LorP18165 486 aa5.82□□□□□ -1.48
Scfd2-203ENSMUST00000113542 Krtap19-9aF8WH65 55 aa5.8□□□□□ -1.48
Scfd2-203ENSMUST00000113542 Gm9789Q8BIG3 52 aa5.78□□□□□ -1.48
Scfd2-203ENSMUST00000113542 Prm1P02319 51 aa5.74□□□□□ -1.49
Scfd2-203ENSMUST00000113542 Rnf213E9Q555 5152 aaKnown RBP5.73□□□□□ -1.49
Scfd2-203ENSMUST00000113542 Gm7735D3YX18 52 aa5.71□□□□□ -1.5
Scfd2-203ENSMUST00000113542 Krtap17-1A2A5X6 109 aa5.66□□□□□ -1.5
Scfd2-203ENSMUST00000113542 Tnp1P10856 55 aa5.58□□□□□ -1.52
Scfd2-203ENSMUST00000113542 Lce1iQ9D6P5 149 aa5.55□□□□□ -1.52
Scfd2-203ENSMUST00000113542 Krtap8-1O08633 61 aa5.55□□□□□ -1.52
Scfd2-203ENSMUST00000113542 SspoQ8CG65 4998 aa5.54□□□□□ -1.52
Scfd2-203ENSMUST00000113542 Krtap19-2Q925I0 141 aa5.52□□□□□ -1.53
Scfd2-203ENSMUST00000113542 Lce1a2Q9D1K4 149 aa5.51□□□□□ -1.53
Scfd2-203ENSMUST00000113542 Krtap9-5A2A5X3 358 aa5.48□□□□□ -1.53
Scfd2-203ENSMUST00000113542 Krtap19-9bQ99NG9 58 aa5.45□□□□□ -1.54
Scfd2-203ENSMUST00000113542 2310046K23RikA0A0A6YVW6 87 aa5.35□□□□□ -1.55
Scfd2-203ENSMUST00000113542 Krtap9-3Q3V2C1 136 aa5.31□□□□□ -1.56
Scfd2-203ENSMUST00000113542 Lce1hQ9D6R3 140 aa5.25□□□□□ -1.57
Scfd2-203ENSMUST00000113542 Gm10061D3Z714 54 aa5.22□□□□□ -1.57
Scfd2-203ENSMUST00000113542 Muc5bE9Q5I3 4800 aa5.2□□□□□ -1.58
Scfd2-203ENSMUST00000113542 Gm6358A0A087WPH4 74 aa5.18□□□□□ -1.58
Scfd2-203ENSMUST00000113542 Mt2P02798 61 aa5.16□□□□□ -1.58
Scfd2-203ENSMUST00000113542 Gm11569B1AQB1 180 aa4.92□□□□□ -1.62
Scfd2-203ENSMUST00000113542 Lce1dQ9D731 133 aa4.89□□□□□ -1.63
Scfd2-203ENSMUST00000113542 Krtap22-2J3QNX6 67 aa4.83□□□□□ -1.64
Scfd2-203ENSMUST00000113542 Sprr2gO70558 76 aa4.79□□□□□ -1.64
Scfd2-203ENSMUST00000113542 Mdn1A2ANY6 5589 aaKnown RBP4.77□□□□□ -1.65
Scfd2-203ENSMUST00000113542 Gm11562A0PK51 136 aa4.76□□□□□ -1.65
Scfd2-203ENSMUST00000113542 Krtap4-2B1AQ85 167 aa4.74□□□□□ -1.65
Scfd2-203ENSMUST00000113542 Gm10272F7CZ33 110 aa4.74□□□□□ -1.65
Scfd2-203ENSMUST00000113542 Lce1eQ9D139 143 aa4.74□□□□□ -1.65
Scfd2-203ENSMUST00000113542 Sprr2dO70555 85 aa4.72□□□□□ -1.65
Scfd2-203ENSMUST00000113542 Lce1gQ9D195 139 aa4.69□□□□□ -1.66
Scfd2-203ENSMUST00000113542 Gm11938Q9D3H4 131 aa4.69□□□□□ -1.66
Scfd2-203ENSMUST00000113542 4933428G20RikQ9D3X4 101 aa4.64□□□□□ -1.67
Scfd2-203ENSMUST00000113542 Syne2Q6ZWQ0 6874 aaKnown RBP4.59□□□□□ -1.67
Scfd2-203ENSMUST00000113542 Gm11555B1AQ89 175 aa4.59□□□□□ -1.67
Scfd2-203ENSMUST00000113542 Lce1cQ9D1C5 147 aa4.53□□□□□ -1.68
Scfd2-203ENSMUST00000113542 Gm11596B1AQB0 205 aa4.52□□□□□ -1.69
Scfd2-203ENSMUST00000113542 Krtap4-6Q3V4B7 195 aa4.52□□□□□ -1.69
Scfd2-203ENSMUST00000113542 Krtap4-1Q3UUY3 169 aa4.43□□□□□ -1.7
Scfd2-203ENSMUST00000113542 Krtap19-4Q925H7 84 aa4.42□□□□□ -1.7
Scfd2-203ENSMUST00000113542 Lce1fB9EJP6 147 aa4.35□□□□□ -1.71
Scfd2-203ENSMUST00000113542 Lce1a1Q9CQH5 143 aa4.35□□□□□ -1.71
Scfd2-203ENSMUST00000113542 Lce3bQ9CQM7 98 aa4.35□□□□□ -1.71
Scfd2-203ENSMUST00000113542 Syne1Q6ZWR6 8799 aa4.35□□□□□ -1.71
Scfd2-203ENSMUST00000113542 Gm11564A2A4L9 201 aa4.32□□□□□ -1.72
Scfd2-203ENSMUST00000113542 Gm11563B1AQ90 168 aa4.32□□□□□ -1.72
Scfd2-203ENSMUST00000113542 Gm11595B1AQA7 289 aa4.32□□□□□ -1.72
Scfd2-203ENSMUST00000113542 Krtap4-8B1AQA8 209 aa4.32□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 76.5 ms