RNA–Protein interactions for RNA: ENSMUST00000108419.8

Vps53-203, Transcript of Vacuolar protein sorting-associated protein 53 homolog, mousemouse

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Gene Vps53, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53-203ENSMUST00000108419 Lce1mQ9CR91 182 aa9.05□□□□□ -0.96
Vps53-203ENSMUST00000108419 Rpl37Q9D823 97 aa9.01□□□□□ -0.97
Vps53-203ENSMUST00000108419 Rnase13Q5GAM7 153 aa8.9□□□□□ -0.98
Vps53-203ENSMUST00000108419 Gm9955Q8CEJ8 102 aa8.88□□□□□ -0.99
Vps53-203ENSMUST00000108419 Romo1P60603 79 aa8.87□□□□□ -0.99
Vps53-203ENSMUST00000108419 Gm20538F6Z9R1 75 aa8.82□□□□□ -1
Vps53-203ENSMUST00000108419 Mp68P56379 58 aa8.79□□□□□ -1
Vps53-203ENSMUST00000108419 CriptO70333 101 aa8.78□□□□□ -1
Vps53-203ENSMUST00000108419 2310057N15RikQ9D6T8 200 aa8.78□□□□□ -1
Vps53-203ENSMUST00000108419 Gm10382Q3V0T5 144 aa8.76□□□□□ -1.01
Vps53-203ENSMUST00000108419 Ush2AQ2QI47 5193 aa8.71□□□□□ -1.02
Vps53-203ENSMUST00000108419 Gm17416Q30KP4 66 aa8.7□□□□□ -1.02
Vps53-203ENSMUST00000108419 Gm18596A0A1W2P860 280 aa8.7□□□□□ -1.02
Vps53-203ENSMUST00000108419 Gm17606F6ZL36 78 aa8.68□□□□□ -1.02
Vps53-203ENSMUST00000108419 Sec61bQ9CQS8 96 aaKnown RBP8.68□□□□□ -1.02
Vps53-203ENSMUST00000108419 Hmcn2A2AJ76 5100 aa8.6□□□□□ -1.03
Vps53-203ENSMUST00000108419 Ubr4A2AN08 5180 aa8.58□□□□□ -1.04
Vps53-203ENSMUST00000108419 Crct1Q6PAI5 102 aa8.51□□□□□ -1.05
Vps53-203ENSMUST00000108419 Krtap3-1A2A591 98 aa8.5□□□□□ -1.05
Vps53-203ENSMUST00000108419 2210017I01RikA0A0A6YVV1 95 aa8.46□□□□□ -1.05
Vps53-203ENSMUST00000108419 Gm9789Q8BIG3 52 aa8.45□□□□□ -1.06
Vps53-203ENSMUST00000108419 Krtap16-3Q8C1I6 86 aa8.45□□□□□ -1.06
Vps53-203ENSMUST00000108419 Krtap13-1Q8K198 168 aa8.42□□□□□ -1.06
Vps53-203ENSMUST00000108419 Gm10318A0A1W2P728 225 aa8.42□□□□□ -1.06
Vps53-203ENSMUST00000108419 Prm1P02319 51 aa8.41□□□□□ -1.06
Vps53-203ENSMUST00000108419 Gm21887J3QQ04 176 aa8.38□□□□□ -1.07
Vps53-203ENSMUST00000108419 4932415D10RikA0A1W2P6U8 4986 aa8.37□□□□□ -1.07
Vps53-203ENSMUST00000108419 Gm7735D3YX18 52 aa8.37□□□□□ -1.07
Vps53-203ENSMUST00000108419 Krtap19-1Q925H2 87 aa8.37□□□□□ -1.07
Vps53-203ENSMUST00000108419 ZanO88799 5376 aa8.36□□□□□ -1.07
Vps53-203ENSMUST00000108419 Krtap1-3A2A588 173 aa8.34□□□□□ -1.07
Vps53-203ENSMUST00000108419 Krtap19-3Q925H6 87 aa8.34□□□□□ -1.07
Vps53-203ENSMUST00000108419 Fam229aB2KGE5 128 aa8.31□□□□□ -1.08
Vps53-203ENSMUST00000108419 Gm19426M0QWC7 77 aa8.27□□□□□ -1.09
Vps53-203ENSMUST00000108419 B930094E09RikQ8C4T2 136 aa8.25□□□□□ -1.09
Vps53-203ENSMUST00000108419 Krtap1-5A2A590 122 aa8.24□□□□□ -1.09
Vps53-203ENSMUST00000108419 Gm19402J3QJV4 266 aa8.16□□□□□ -1.1
Vps53-203ENSMUST00000108419 Krtap7-1Q9D3I6 87 aa8.14□□□□□ -1.11
Vps53-203ENSMUST00000108419 LorP18165 486 aa8.14□□□□□ -1.11
Vps53-203ENSMUST00000108419 Ndufaf8A2AMZ4 74 aa8.13□□□□□ -1.11
Vps53-203ENSMUST00000108419 Fat4Q2PZL6 4981 aa8.08□□□□□ -1.12
Vps53-203ENSMUST00000108419 BC029722A0A0N4SW31 51 aa8.06□□□□□ -1.12
Vps53-203ENSMUST00000108419 Gm17402F6Z0L5 76 aa8.02□□□□□ -1.13
Vps53-203ENSMUST00000108419 Rnf213E9Q555 5152 aaKnown RBP8.02□□□□□ -1.13
Vps53-203ENSMUST00000108419 Prm2P07978 107 aa7.98□□□□□ -1.13
Vps53-203ENSMUST00000108419 Krtap1-4Q3V2D6 188 aa7.96□□□□□ -1.14
Vps53-203ENSMUST00000108419 Gm40193A0A1B0GT39 78 aa7.95□□□□□ -1.14
Vps53-203ENSMUST00000108419 Gm19668J3QMD1 248 aa7.79□□□□□ -1.16
Vps53-203ENSMUST00000108419 Sprr2a3Q4KL71 83 aa7.75□□□□□ -1.17
Vps53-203ENSMUST00000108419 Sprr2a1Q9CQK8 83 aa7.75□□□□□ -1.17
Vps53-203ENSMUST00000108419 Spink7Q6IE32 76 aa7.72□□□□□ -1.17
Vps53-203ENSMUST00000108419 Lce1jD3YUU5 139 aa7.69□□□□□ -1.18
Vps53-203ENSMUST00000108419 SspoQ8CG65 4998 aa7.67□□□□□ -1.18
Vps53-203ENSMUST00000108419 Krtap12-1Q9Z287 130 aa7.6□□□□□ -1.19
Vps53-203ENSMUST00000108419 Gm10061D3Z714 54 aa7.57□□□□□ -1.2
Vps53-203ENSMUST00000108419 Krtap17-1A2A5X6 109 aa7.54□□□□□ -1.2
Vps53-203ENSMUST00000108419 Krtap19-9aF8WH65 55 aa7.48□□□□□ -1.21
Vps53-203ENSMUST00000108419 Gm9112A2AI92 75 aa7.43□□□□□ -1.22
Vps53-203ENSMUST00000108419 Krtap19-2Q925I0 141 aa7.43□□□□□ -1.22
Vps53-203ENSMUST00000108419 Krtap9-5A2A5X3 358 aa7.4□□□□□ -1.22
Vps53-203ENSMUST00000108419 Camk2n1Q6QWF9 78 aa7.38□□□□□ -1.23
Vps53-203ENSMUST00000108419 Gm11569B1AQB1 180 aa7.23□□□□□ -1.25
Vps53-203ENSMUST00000108419 Lce1iQ9D6P5 149 aa7.21□□□□□ -1.26
Vps53-203ENSMUST00000108419 Muc5bE9Q5I3 4800 aa7.14□□□□□ -1.27
Vps53-203ENSMUST00000108419 Lce1a2Q9D1K4 149 aa7.12□□□□□ -1.27
Vps53-203ENSMUST00000108419 Tnp1P10856 55 aa7.11□□□□□ -1.27
Vps53-203ENSMUST00000108419 Gm6358A0A087WPH4 74 aa7.04□□□□□ -1.28
Vps53-203ENSMUST00000108419 Mt2P02798 61 aa6.85□□□□□ -1.31
Vps53-203ENSMUST00000108419 Mdn1A2ANY6 5589 aaKnown RBP6.82□□□□□ -1.32
Vps53-203ENSMUST00000108419 2310046K23RikA0A0A6YVW6 87 aa6.81□□□□□ -1.32
Vps53-203ENSMUST00000108419 Krtap8-1O08633 61 aa6.79□□□□□ -1.32
Vps53-203ENSMUST00000108419 Krtap19-9bQ99NG9 58 aa6.74□□□□□ -1.33
Vps53-203ENSMUST00000108419 Krtap4-2B1AQ85 167 aa6.66□□□□□ -1.34
Vps53-203ENSMUST00000108419 Lce1gQ9D195 139 aa6.65□□□□□ -1.34
Vps53-203ENSMUST00000108419 Gm11555B1AQ89 175 aa6.64□□□□□ -1.35
Vps53-203ENSMUST00000108419 Krtap4-6Q3V4B7 195 aa6.62□□□□□ -1.35
Vps53-203ENSMUST00000108419 Syne2Q6ZWQ0 6874 aaKnown RBP6.55□□□□□ -1.36
Vps53-203ENSMUST00000108419 Krtap4-1Q3UUY3 169 aa6.49□□□□□ -1.37
Vps53-203ENSMUST00000108419 Krtap9-3Q3V2C1 136 aa6.48□□□□□ -1.37
Vps53-203ENSMUST00000108419 Gm11596B1AQB0 205 aa6.47□□□□□ -1.37
Vps53-203ENSMUST00000108419 Krtap22-2J3QNX6 67 aa6.46□□□□□ -1.37
Vps53-203ENSMUST00000108419 Gm11562A0PK51 136 aa6.42□□□□□ -1.38
Vps53-203ENSMUST00000108419 Lce1hQ9D6R3 140 aa6.4□□□□□ -1.38
Vps53-203ENSMUST00000108419 Gm11564A2A4L9 201 aa6.29□□□□□ -1.4
Vps53-203ENSMUST00000108419 Gm11563B1AQ90 168 aa6.29□□□□□ -1.4
Vps53-203ENSMUST00000108419 Gm11595B1AQA7 289 aa6.29□□□□□ -1.4
Vps53-203ENSMUST00000108419 Krtap4-8B1AQA8 209 aa6.29□□□□□ -1.4
Vps53-203ENSMUST00000108419 Lce1dQ9D731 133 aa6.19□□□□□ -1.42
Vps53-203ENSMUST00000108419 Fsip2A2ARZ3 6995 aa6.19□□□□□ -1.42
Vps53-203ENSMUST00000108419 Mt4P47945 62 aa6.15□□□□□ -1.43
Vps53-203ENSMUST00000108419 Krtap4-9B1AQA9 244 aa6.13□□□□□ -1.43
Vps53-203ENSMUST00000108419 Sprr2gO70558 76 aa6.06□□□□□ -1.44
Vps53-203ENSMUST00000108419 Krtap4-7Q9D732 168 aa6.06□□□□□ -1.44
Vps53-203ENSMUST00000108419 4933428G20RikQ9D3X4 101 aa6□□□□□ -1.45
Vps53-203ENSMUST00000108419 Lce1bQ9D149 137 aa5.99□□□□□ -1.45
Vps53-203ENSMUST00000108419 Lce1eQ9D139 143 aa5.97□□□□□ -1.45
Vps53-203ENSMUST00000108419 Gm10272F7CZ33 110 aa5.96□□□□□ -1.46
Vps53-203ENSMUST00000108419 Gm38119A0A0A6YX29 146 aa5.95□□□□□ -1.46
Vps53-203ENSMUST00000108419 Gm11938Q9D3H4 131 aa5.95□□□□□ -1.46
Vps53-203ENSMUST00000108419 Sprr2dO70555 85 aa5.93□□□□□ -1.46
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms