RNA–Protein interactions for RNA: ENSMUST00000105994.3

Snrnp40-201, Transcript of U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Snrnp40, Length 1,584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40-201ENSMUST00000105994 2210017I01RikA0A0A6YVV1 95 aa10.6□□□□□ -0.71
Snrnp40-201ENSMUST00000105994 Defb1P56386 69 aa10.6□□□□□ -0.71
Snrnp40-201ENSMUST00000105994 SptssbQ925E8 76 aa10.6□□□□□ -0.71
Snrnp40-201ENSMUST00000105994 Fam229aB2KGE5 128 aa10.58□□□□□ -0.72
Snrnp40-201ENSMUST00000105994 1700042G07RikB1AUF7 90 aa10.57□□□□□ -0.72
Snrnp40-201ENSMUST00000105994 Gm10061D3Z714 54 aa10.56□□□□□ -0.72
Snrnp40-201ENSMUST00000105994 Gm20661K7N787 53 aa10.56□□□□□ -0.72
Snrnp40-201ENSMUST00000105994 Phxr4P15974 95 aa10.53□□□□□ -0.72
Snrnp40-201ENSMUST00000105994 H2al1aQ5M8Q2 105 aa10.52□□□□□ -0.72
Snrnp40-201ENSMUST00000105994 H2al1eQ810S6 105 aa10.52□□□□□ -0.72
Snrnp40-201ENSMUST00000105994 Cox6b2Q80ZN9 88 aa10.51□□□□□ -0.73
Snrnp40-201ENSMUST00000105994 Krtap13-1Q8K198 168 aa10.49□□□□□ -0.73
Snrnp40-201ENSMUST00000105994 Krtap1-4Q3V2D6 188 aa10.48□□□□□ -0.73
Snrnp40-201ENSMUST00000105994 SspoQ8CG65 4998 aa10.4□□□□□ -0.74
Snrnp40-201ENSMUST00000105994 H2al1bA0A087WP11 105 aa10.37□□□□□ -0.75
Snrnp40-201ENSMUST00000105994 Gm11562A0PK51 136 aa10.37□□□□□ -0.75
Snrnp40-201ENSMUST00000105994 Krtap1-5A2A590 122 aa10.37□□□□□ -0.75
Snrnp40-201ENSMUST00000105994 Uqcr11Q9CPX8 56 aa10.36□□□□□ -0.75
Snrnp40-201ENSMUST00000105994 Krtap3-1A2A591 98 aa10.35□□□□□ -0.75
Snrnp40-201ENSMUST00000105994 Gm11569B1AQB1 180 aa10.34□□□□□ -0.75
Snrnp40-201ENSMUST00000105994 Limd2Q8BGB5 128 aa10.33□□□□□ -0.76
Snrnp40-201ENSMUST00000105994 Ndufb1P0DN34 57 aa10.32□□□□□ -0.76
Snrnp40-201ENSMUST00000105994 Gm17606F6ZL36 78 aa10.31□□□□□ -0.76
Snrnp40-201ENSMUST00000105994 Krtap17-1A2A5X6 109 aa10.26□□□□□ -0.77
Snrnp40-201ENSMUST00000105994 Krtap4-2B1AQ85 167 aa10.15□□□□□ -0.78
Snrnp40-201ENSMUST00000105994 Gm10382Q3V0T5 144 aa10.12□□□□□ -0.79
Snrnp40-201ENSMUST00000105994 Sec61gP60060 68 aa10.07□□□□□ -0.8
Snrnp40-201ENSMUST00000105994 Sox16Q62247 57 aa10.05□□□□□ -0.8
Snrnp40-201ENSMUST00000105994 Gm20537G3UYK7 97 aa10.04□□□□□ -0.8
Snrnp40-201ENSMUST00000105994 BC029722A0A0N4SW31 51 aa10□□□□□ -0.81
Snrnp40-201ENSMUST00000105994 Lce1gQ9D195 139 aa10□□□□□ -0.81
Snrnp40-201ENSMUST00000105994 Gm19426M0QWC7 77 aa9.92□□□□□ -0.82
Snrnp40-201ENSMUST00000105994 Syne2Q6ZWQ0 6874 aaKnown RBP9.89□□□□□ -0.83
Snrnp40-201ENSMUST00000105994 Gm10337F7DEP7 55 aa9.86□□□□□ -0.83
Snrnp40-201ENSMUST00000105994 4933415A04RikQ9D443 101 aa9.84□□□□□ -0.83
Snrnp40-201ENSMUST00000105994 Gm9955Q8CEJ8 102 aa9.8□□□□□ -0.84
Snrnp40-201ENSMUST00000105994 H2al1kJ3QP08 105 aa9.8□□□□□ -0.84
Snrnp40-201ENSMUST00000105994 H2al1mQ9DAD9 105 aa9.8□□□□□ -0.84
Snrnp40-201ENSMUST00000105994 B930094E09RikQ8C4T2 136 aa9.74□□□□□ -0.85
Snrnp40-201ENSMUST00000105994 Gm11555B1AQ89 175 aa9.72□□□□□ -0.85
Snrnp40-201ENSMUST00000105994 CriptO70333 101 aa9.67□□□□□ -0.86
Snrnp40-201ENSMUST00000105994 Muc5bE9Q5I3 4800 aa9.66□□□□□ -0.86
Snrnp40-201ENSMUST00000105994 Gm11596B1AQB0 205 aa9.62□□□□□ -0.87
Snrnp40-201ENSMUST00000105994 Krtap19-2Q925I0 141 aa9.62□□□□□ -0.87
Snrnp40-201ENSMUST00000105994 Krtap9-5A2A5X3 358 aa9.61□□□□□ -0.87
Snrnp40-201ENSMUST00000105994 Krtap12-1Q9Z287 130 aa9.58□□□□□ -0.88
Snrnp40-201ENSMUST00000105994 Spink7Q6IE32 76 aa9.56□□□□□ -0.88
Snrnp40-201ENSMUST00000105994 Lce1jD3YUU5 139 aa9.54□□□□□ -0.88
Snrnp40-201ENSMUST00000105994 Krtap4-6Q3V4B7 195 aa9.51□□□□□ -0.89
Snrnp40-201ENSMUST00000105994 Mdn1A2ANY6 5589 aaKnown RBP9.51□□□□□ -0.89
Snrnp40-201ENSMUST00000105994 Gm17402F6Z0L5 76 aa9.5□□□□□ -0.89
Snrnp40-201ENSMUST00000105994 SvipQ3UZP4 77 aa9.5□□□□□ -0.89
Snrnp40-201ENSMUST00000105994 Ndufs5Q99LY9 106 aa9.48□□□□□ -0.89
Snrnp40-201ENSMUST00000105994 Krtap19-9aF8WH65 55 aa9.44□□□□□ -0.9
Snrnp40-201ENSMUST00000105994 Gm3646F6S692 53 aa9.43□□□□□ -0.9
Snrnp40-201ENSMUST00000105994 Sprr2a3Q4KL71 83 aa9.37□□□□□ -0.91
Snrnp40-201ENSMUST00000105994 Sprr2a1Q9CQK8 83 aa9.37□□□□□ -0.91
Snrnp40-201ENSMUST00000105994 Krtap4-1Q3UUY3 169 aa9.34□□□□□ -0.91
Snrnp40-201ENSMUST00000105994 Pla2g10Q9QXX3 151 aa9.33□□□□□ -0.92
Snrnp40-201ENSMUST00000105994 Prm2P07978 107 aa9.27□□□□□ -0.93
Snrnp40-201ENSMUST00000105994 Gm3880A0A1B0GSB3 72 aa9.24□□□□□ -0.93
Snrnp40-201ENSMUST00000105994 Gm6358A0A087WPH4 74 aa9.2□□□□□ -0.94
Snrnp40-201ENSMUST00000105994 Gm11564A2A4L9 201 aa9.13□□□□□ -0.95
Snrnp40-201ENSMUST00000105994 Gm11563B1AQ90 168 aa9.13□□□□□ -0.95
Snrnp40-201ENSMUST00000105994 Gm11595B1AQA7 289 aa9.13□□□□□ -0.95
Snrnp40-201ENSMUST00000105994 Krtap4-8B1AQA8 209 aa9.13□□□□□ -0.95
Snrnp40-201ENSMUST00000105994 Gm12216A0A1W2P827 62 aa8.99□□□□□ -0.97
Snrnp40-201ENSMUST00000105994 Lce1iQ9D6P5 149 aa8.96□□□□□ -0.97
Snrnp40-201ENSMUST00000105994 Gm19668J3QMD1 248 aa8.9□□□□□ -0.98
Snrnp40-201ENSMUST00000105994 Romo1P60603 79 aa8.86□□□□□ -0.99
Snrnp40-201ENSMUST00000105994 Krtap4-9B1AQA9 244 aa8.85□□□□□ -0.99
Snrnp40-201ENSMUST00000105994 Fsip2A2ARZ3 6995 aa8.83□□□□□ -1
Snrnp40-201ENSMUST00000105994 Lce1a2Q9D1K4 149 aa8.82□□□□□ -1
Snrnp40-201ENSMUST00000105994 Gm21887J3QQ04 176 aa8.81□□□□□ -1
Snrnp40-201ENSMUST00000105994 Mt2P02798 61 aa8.73□□□□□ -1.01
Snrnp40-201ENSMUST00000105994 Mt4P47945 62 aa8.72□□□□□ -1.01
Snrnp40-201ENSMUST00000105994 Camk2n1Q6QWF9 78 aa8.71□□□□□ -1.02
Snrnp40-201ENSMUST00000105994 Krtap9-3Q3V2C1 136 aa8.61□□□□□ -1.03
Snrnp40-201ENSMUST00000105994 Krtap8-1O08633 61 aa8.57□□□□□ -1.04
Snrnp40-201ENSMUST00000105994 Krtap4-13Q9D7P3 165 aa8.52□□□□□ -1.04
Snrnp40-201ENSMUST00000105994 Krtap6-3A0A087WQL6 57 aa8.44□□□□□ -1.06
Snrnp40-201ENSMUST00000105994 Krtap19-9bQ99NG9 58 aa8.44□□□□□ -1.06
Snrnp40-201ENSMUST00000105994 Lce1bQ9D149 137 aa8.41□□□□□ -1.06
Snrnp40-201ENSMUST00000105994 Sprr2kO70562 68 aa8.31□□□□□ -1.08
Snrnp40-201ENSMUST00000105994 Krtap22-2J3QNX6 67 aa8.31□□□□□ -1.08
Snrnp40-201ENSMUST00000105994 Gm38119A0A0A6YX29 146 aa8.22□□□□□ -1.09
Snrnp40-201ENSMUST00000105994 2300003K06RikA2A4M0 262 aa8.22□□□□□ -1.09
Snrnp40-201ENSMUST00000105994 Lce1lQ9D1G7 135 aa8.16□□□□□ -1.1
Snrnp40-201ENSMUST00000105994 Krtap4-7Q9D732 168 aa8.1□□□□□ -1.11
Snrnp40-201ENSMUST00000105994 Gm40193A0A1B0GT39 78 aa8.05□□□□□ -1.12
Snrnp40-201ENSMUST00000105994 Krtap7-1Q9D3I6 87 aa7.97□□□□□ -1.13
Snrnp40-201ENSMUST00000105994 Tnp1P10856 55 aa7.82□□□□□ -1.16
Snrnp40-201ENSMUST00000105994 Mp68P56379 58 aa7.81□□□□□ -1.16
Snrnp40-201ENSMUST00000105994 Sprr2gO70558 76 aa7.78□□□□□ -1.16
Snrnp40-201ENSMUST00000105994 Lce1hQ9D6R3 140 aa7.77□□□□□ -1.17
Snrnp40-201ENSMUST00000105994 Lce1a1Q9CQH5 143 aa7.76□□□□□ -1.17
Snrnp40-201ENSMUST00000105994 Krtap20-2E9Q0A8 60 aa7.71□□□□□ -1.17
Snrnp40-201ENSMUST00000105994 Lce1eQ9D139 143 aa7.54□□□□□ -1.2
Snrnp40-201ENSMUST00000105994 A0A1Y7VJH8 109 aa7.51□□□□□ -1.21
Snrnp40-201ENSMUST00000105994 Lce1dQ9D731 133 aa7.5□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms