RNA–Protein interactions for RNA: ENSMUST00000089915.9

Casc4-203, Transcript of Protein CASC4, mousemouse

TSL 2 BASIC

Gene Casc4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4-203ENSMUST00000089915 Kiaa1109A2AAE1 5005 aa7.2□□□□□ -1.26
Casc4-203ENSMUST00000089915 Krtap3-1A2A591 98 aa7.18□□□□□ -1.26
Casc4-203ENSMUST00000089915 Mp68P56379 58 aa7.18□□□□□ -1.26
Casc4-203ENSMUST00000089915 Gm9955Q8CEJ8 102 aa7.17□□□□□ -1.26
Casc4-203ENSMUST00000089915 Herc2Q4U2R1 4836 aa7.16□□□□□ -1.26
Casc4-203ENSMUST00000089915 Gm17606F6ZL36 78 aa7.14□□□□□ -1.27
Casc4-203ENSMUST00000089915 Gm17416Q30KP4 66 aa7.08□□□□□ -1.28
Casc4-203ENSMUST00000089915 Lrp2A2ARV4 4660 aa7.08□□□□□ -1.28
Casc4-203ENSMUST00000089915 Dnhd1D3Z2X2 4750 aa7.07□□□□□ -1.28
Casc4-203ENSMUST00000089915 Romo1P60603 79 aa7.05□□□□□ -1.28
Casc4-203ENSMUST00000089915 Birc6O88738 4882 aa7.01□□□□□ -1.29
Casc4-203ENSMUST00000089915 PcloQ9QYX7 5068 aa6.98□□□□□ -1.29
Casc4-203ENSMUST00000089915 2210017I01RikA0A0A6YVV1 95 aa6.98□□□□□ -1.29
Casc4-203ENSMUST00000089915 2310057N15RikQ9D6T8 200 aa6.95□□□□□ -1.3
Casc4-203ENSMUST00000089915 Krtap13-1Q8K198 168 aa6.9□□□□□ -1.3
Casc4-203ENSMUST00000089915 B930094E09RikQ8C4T2 136 aa6.79□□□□□ -1.32
Casc4-203ENSMUST00000089915 Gm10318A0A1W2P728 225 aa6.78□□□□□ -1.32
Casc4-203ENSMUST00000089915 Gm19402J3QJV4 266 aa6.75□□□□□ -1.33
Casc4-203ENSMUST00000089915 Gm19426M0QWC7 77 aa6.74□□□□□ -1.33
Casc4-203ENSMUST00000089915 Sec61bQ9CQS8 96 aaKnown RBP6.72□□□□□ -1.33
Casc4-203ENSMUST00000089915 BC029722A0A0N4SW31 51 aa6.72□□□□□ -1.33
Casc4-203ENSMUST00000089915 Crct1Q6PAI5 102 aa6.72□□□□□ -1.33
Casc4-203ENSMUST00000089915 Ndufaf8A2AMZ4 74 aa6.7□□□□□ -1.34
Casc4-203ENSMUST00000089915 Krtap1-5A2A590 122 aa6.67□□□□□ -1.34
Casc4-203ENSMUST00000089915 Herc1E9PZP8 4859 aa6.64□□□□□ -1.35
Casc4-203ENSMUST00000089915 Krtap16-3Q8C1I6 86 aa6.64□□□□□ -1.35
Casc4-203ENSMUST00000089915 Krtap7-1Q9D3I6 87 aa6.55□□□□□ -1.36
Casc4-203ENSMUST00000089915 Ubr4A2AN08 5180 aa6.53□□□□□ -1.36
Casc4-203ENSMUST00000089915 Krtap19-1Q925H2 87 aa6.51□□□□□ -1.37
Casc4-203ENSMUST00000089915 ZanO88799 5376 aa6.51□□□□□ -1.37
Casc4-203ENSMUST00000089915 Gm17402F6Z0L5 76 aa6.48□□□□□ -1.37
Casc4-203ENSMUST00000089915 Sprr2a3Q4KL71 83 aa6.47□□□□□ -1.37
Casc4-203ENSMUST00000089915 Krtap19-3Q925H6 87 aa6.47□□□□□ -1.37
Casc4-203ENSMUST00000089915 Sprr2a1Q9CQK8 83 aa6.47□□□□□ -1.37
Casc4-203ENSMUST00000089915 Fat4Q2PZL6 4981 aa6.45□□□□□ -1.38
Casc4-203ENSMUST00000089915 Spink7Q6IE32 76 aa6.44□□□□□ -1.38
Casc4-203ENSMUST00000089915 4932415D10RikA0A1W2P6U8 4986 aa6.44□□□□□ -1.38
Casc4-203ENSMUST00000089915 Gm19668J3QMD1 248 aa6.44□□□□□ -1.38
Casc4-203ENSMUST00000089915 Fam229aB2KGE5 128 aa6.37□□□□□ -1.39
Casc4-203ENSMUST00000089915 Ush2AQ2QI47 5193 aa6.35□□□□□ -1.39
Casc4-203ENSMUST00000089915 Hmcn2A2AJ76 5100 aa6.34□□□□□ -1.4
Casc4-203ENSMUST00000089915 Gm9112A2AI92 75 aa6.31□□□□□ -1.4
Casc4-203ENSMUST00000089915 Krtap1-4Q3V2D6 188 aa6.28□□□□□ -1.4
Casc4-203ENSMUST00000089915 Lce1jD3YUU5 139 aa6.21□□□□□ -1.42
Casc4-203ENSMUST00000089915 Krtap1-3A2A588 173 aa6.18□□□□□ -1.42
Casc4-203ENSMUST00000089915 Rnf213E9Q555 5152 aaKnown RBP6.15□□□□□ -1.42
Casc4-203ENSMUST00000089915 Gm40193A0A1B0GT39 78 aa6.13□□□□□ -1.43
Casc4-203ENSMUST00000089915 Camk2n1Q6QWF9 78 aa6.12□□□□□ -1.43
Casc4-203ENSMUST00000089915 Lce1mQ9CR91 182 aa6.12□□□□□ -1.43
Casc4-203ENSMUST00000089915 Krtap17-1A2A5X6 109 aa6.07□□□□□ -1.44
Casc4-203ENSMUST00000089915 LorP18165 486 aa6.07□□□□□ -1.44
Casc4-203ENSMUST00000089915 Krtap12-1Q9Z287 130 aa5.99□□□□□ -1.45
Casc4-203ENSMUST00000089915 Krtap19-9aF8WH65 55 aa5.93□□□□□ -1.46
Casc4-203ENSMUST00000089915 Gm9789Q8BIG3 52 aa5.86□□□□□ -1.47
Casc4-203ENSMUST00000089915 Gm18596A0A1W2P860 280 aa5.84□□□□□ -1.47
Casc4-203ENSMUST00000089915 Lce1iQ9D6P5 149 aa5.81□□□□□ -1.48
Casc4-203ENSMUST00000089915 Lce1a2Q9D1K4 149 aa5.78□□□□□ -1.48
Casc4-203ENSMUST00000089915 SspoQ8CG65 4998 aa5.75□□□□□ -1.49
Casc4-203ENSMUST00000089915 Krtap19-2Q925I0 141 aa5.69□□□□□ -1.5
Casc4-203ENSMUST00000089915 Tnp1P10856 55 aa5.69□□□□□ -1.5
Casc4-203ENSMUST00000089915 Gm7735D3YX18 52 aa5.68□□□□□ -1.5
Casc4-203ENSMUST00000089915 Krtap8-1O08633 61 aa5.67□□□□□ -1.5
Casc4-203ENSMUST00000089915 Krtap9-5A2A5X3 358 aa5.67□□□□□ -1.5
Casc4-203ENSMUST00000089915 Krtap9-3Q3V2C1 136 aa5.67□□□□□ -1.5
Casc4-203ENSMUST00000089915 Prm1P02319 51 aa5.65□□□□□ -1.5
Casc4-203ENSMUST00000089915 Krtap19-9bQ99NG9 58 aa5.56□□□□□ -1.52
Casc4-203ENSMUST00000089915 Lce1hQ9D6R3 140 aa5.55□□□□□ -1.52
Casc4-203ENSMUST00000089915 2310046K23RikA0A0A6YVW6 87 aa5.47□□□□□ -1.53
Casc4-203ENSMUST00000089915 Muc5bE9Q5I3 4800 aa5.4□□□□□ -1.54
Casc4-203ENSMUST00000089915 Gm6358A0A087WPH4 74 aa5.34□□□□□ -1.55
Casc4-203ENSMUST00000089915 Gm10061D3Z714 54 aa5.33□□□□□ -1.56
Casc4-203ENSMUST00000089915 Mt2P02798 61 aa5.32□□□□□ -1.56
Casc4-203ENSMUST00000089915 Lce1dQ9D731 133 aa5.24□□□□□ -1.57
Casc4-203ENSMUST00000089915 Krtap31-1Q9D644 177 aa5.14□□□□□ -1.59
Casc4-203ENSMUST00000089915 Mdn1A2ANY6 5589 aaKnown RBP5.08□□□□□ -1.6
Casc4-203ENSMUST00000089915 A0A1Y7VJH8 109 aa5.06□□□□□ -1.6
Casc4-203ENSMUST00000089915 Lce1eQ9D139 143 aa5.06□□□□□ -1.6
Casc4-203ENSMUST00000089915 Gm11569B1AQB1 180 aa4.96□□□□□ -1.61
Casc4-203ENSMUST00000089915 Gm10272F7CZ33 110 aa4.96□□□□□ -1.62
Casc4-203ENSMUST00000089915 Krtap28-10A0A1Y7VP58 119 aa4.94□□□□□ -1.62
Casc4-203ENSMUST00000089915 Krtap22-2J3QNX6 67 aa4.94□□□□□ -1.62
Casc4-203ENSMUST00000089915 Sprr2gO70558 76 aa4.92□□□□□ -1.62
Casc4-203ENSMUST00000089915 Gm11938Q9D3H4 131 aa4.9□□□□□ -1.62
Casc4-203ENSMUST00000089915 Krtap31-2Q8CAY5 177 aa4.9□□□□□ -1.63
Casc4-203ENSMUST00000089915 Lce1cQ9D1C5 147 aa4.84□□□□□ -1.63
Casc4-203ENSMUST00000089915 Sprr2dO70555 85 aa4.83□□□□□ -1.64
Casc4-203ENSMUST00000089915 Syne1Q6ZWR6 8799 aa4.72□□□□□ -1.65
Casc4-203ENSMUST00000089915 A0A1Y7VLE6 161 aa4.72□□□□□ -1.65
Casc4-203ENSMUST00000089915 4933428G20RikQ9D3X4 101 aa4.7□□□□□ -1.66
Casc4-203ENSMUST00000089915 Gm11562A0PK51 136 aa4.69□□□□□ -1.66
Casc4-203ENSMUST00000089915 Krtap28-13A0A087WQP5 138 aa4.67□□□□□ -1.66
Casc4-203ENSMUST00000089915 A030005L19RikA0A1Y7VIU2 113 aa4.66□□□□□ -1.66
Casc4-203ENSMUST00000089915 Lce1fB9EJP6 147 aa4.66□□□□□ -1.66
Casc4-203ENSMUST00000089915 Lce1a1Q9CQH5 143 aa4.66□□□□□ -1.66
Casc4-203ENSMUST00000089915 Krtap4-6Q3V4B7 195 aa4.55□□□□□ -1.68
Casc4-203ENSMUST00000089915 A030005K14RikA0A1Y7VNY1 122 aa4.53□□□□□ -1.68
Casc4-203ENSMUST00000089915 Lce3bQ9CQM7 98 aa4.53□□□□□ -1.68
Casc4-203ENSMUST00000089915 Gm10100J3QK64 120 aa4.51□□□□□ -1.69
Casc4-203ENSMUST00000089915 Muc16A0A140LJ72 8478 aa4.48□□□□□ -1.69
Casc4-203ENSMUST00000089915 Krtap19-4Q925H7 84 aa4.47□□□□□ -1.69
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms