RNA–Protein interactions for RNA: ENSMUST00000088169.5

Rtn3-203, Transcript of Reticulon-3, mousemouse

TSL 5 BASIC

Gene Rtn3, Length 1,709 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-203ENSMUST00000088169 Rnase13Q5GAM7 153 aa7.28□□□□□ -1.24
Rtn3-203ENSMUST00000088169 Prm2P07978 107 aa7.27□□□□□ -1.25
Rtn3-203ENSMUST00000088169 Ndufb1P0DN34 57 aa7.25□□□□□ -1.25
Rtn3-203ENSMUST00000088169 Limd2Q8BGB5 128 aa7.25□□□□□ -1.25
Rtn3-203ENSMUST00000088169 4933415A04RikQ9D443 101 aa7.25□□□□□ -1.25
Rtn3-203ENSMUST00000088169 Gm7544A0A1Y7VJ58 118 aa7.24□□□□□ -1.25
Rtn3-203ENSMUST00000088169 Uqcr11Q9CPX8 56 aa7.24□□□□□ -1.25
Rtn3-203ENSMUST00000088169 Lce1mQ9CR91 182 aa7.22□□□□□ -1.25
Rtn3-203ENSMUST00000088169 A0A1Y7VJ07 166 aa7.18□□□□□ -1.26
Rtn3-203ENSMUST00000088169 Gm17416Q30KP4 66 aa7.18□□□□□ -1.26
Rtn3-203ENSMUST00000088169 Gm12216A0A1W2P827 62 aa7.18□□□□□ -1.26
Rtn3-203ENSMUST00000088169 Defb1P56386 69 aa7.16□□□□□ -1.26
Rtn3-203ENSMUST00000088169 HydinQ80W93 5154 aa7.13□□□□□ -1.27
Rtn3-203ENSMUST00000088169 Mp68P56379 58 aa7.1□□□□□ -1.27
Rtn3-203ENSMUST00000088169 Cox6b2Q80ZN9 88 aa7.1□□□□□ -1.27
Rtn3-203ENSMUST00000088169 Lrp2A2ARV4 4660 aa7.06□□□□□ -1.28
Rtn3-203ENSMUST00000088169 2210017I01RikA0A0A6YVV1 95 aa6.96□□□□□ -1.3
Rtn3-203ENSMUST00000088169 A030014E15RikA0A1Y7VJV2 120 aa6.94□□□□□ -1.3
Rtn3-203ENSMUST00000088169 Ndufs5Q99LY9 106 aa6.93□□□□□ -1.3
Rtn3-203ENSMUST00000088169 Gm17606F6ZL36 78 aa6.93□□□□□ -1.3
Rtn3-203ENSMUST00000088169 Gm3646F6S692 53 aa6.87□□□□□ -1.31
Rtn3-203ENSMUST00000088169 PcloQ9QYX7 5068 aa6.86□□□□□ -1.31
Rtn3-203ENSMUST00000088169 Krtap3-1A2A591 98 aa6.85□□□□□ -1.31
Rtn3-203ENSMUST00000088169 2310057N15RikQ9D6T8 200 aa6.84□□□□□ -1.31
Rtn3-203ENSMUST00000088169 Fam229aB2KGE5 128 aa6.77□□□□□ -1.33
Rtn3-203ENSMUST00000088169 Krtap13-1Q8K198 168 aa6.77□□□□□ -1.33
Rtn3-203ENSMUST00000088169 Pla2g10Q9QXX3 151 aa6.77□□□□□ -1.33
Rtn3-203ENSMUST00000088169 Gm10382Q3V0T5 144 aa6.76□□□□□ -1.33
Rtn3-203ENSMUST00000088169 Herc1E9PZP8 4859 aa6.75□□□□□ -1.33
Rtn3-203ENSMUST00000088169 Gm9955Q8CEJ8 102 aa6.74□□□□□ -1.33
Rtn3-203ENSMUST00000088169 Gm19402J3QJV4 266 aa6.7□□□□□ -1.34
Rtn3-203ENSMUST00000088169 Krtap1-5A2A590 122 aa6.7□□□□□ -1.34
Rtn3-203ENSMUST00000088169 Gm18596A0A1W2P860 280 aa6.67□□□□□ -1.34
Rtn3-203ENSMUST00000088169 Gm20537G3UYK7 97 aa6.67□□□□□ -1.34
Rtn3-203ENSMUST00000088169 Krtap16-3Q8C1I6 86 aa6.67□□□□□ -1.34
Rtn3-203ENSMUST00000088169 BC029722A0A0N4SW31 51 aa6.64□□□□□ -1.35
Rtn3-203ENSMUST00000088169 Krtap19-1Q925H2 87 aa6.62□□□□□ -1.35
Rtn3-203ENSMUST00000088169 Prm1P02319 51 aa6.59□□□□□ -1.36
Rtn3-203ENSMUST00000088169 Romo1P60603 79 aa6.59□□□□□ -1.36
Rtn3-203ENSMUST00000088169 Gm9789Q8BIG3 52 aa6.58□□□□□ -1.36
Rtn3-203ENSMUST00000088169 Krtap19-3Q925H6 87 aa6.58□□□□□ -1.36
Rtn3-203ENSMUST00000088169 Ush2AQ2QI47 5193 aa6.51□□□□□ -1.37
Rtn3-203ENSMUST00000088169 Crct1Q6PAI5 102 aa6.51□□□□□ -1.37
Rtn3-203ENSMUST00000088169 Hmcn2A2AJ76 5100 aa6.5□□□□□ -1.37
Rtn3-203ENSMUST00000088169 Gm7735D3YX18 52 aa6.5□□□□□ -1.37
Rtn3-203ENSMUST00000088169 Krtap1-3A2A588 173 aa6.48□□□□□ -1.37
Rtn3-203ENSMUST00000088169 Gm17402F6Z0L5 76 aa6.45□□□□□ -1.38
Rtn3-203ENSMUST00000088169 Gm3880A0A1B0GSB3 72 aa6.43□□□□□ -1.38
Rtn3-203ENSMUST00000088169 Gm19426M0QWC7 77 aa6.43□□□□□ -1.38
Rtn3-203ENSMUST00000088169 Gm10318A0A1W2P728 225 aa6.41□□□□□ -1.38
Rtn3-203ENSMUST00000088169 A030003K21RikA0A1Y7VIM3 128 aa6.39□□□□□ -1.39
Rtn3-203ENSMUST00000088169 4932415D10RikA0A1W2P6U8 4986 aa6.36□□□□□ -1.39
Rtn3-203ENSMUST00000088169 Krtap1-4Q3V2D6 188 aa6.36□□□□□ -1.39
Rtn3-203ENSMUST00000088169 CriptO70333 101 aa6.34□□□□□ -1.39
Rtn3-203ENSMUST00000088169 B930094E09RikQ8C4T2 136 aa6.33□□□□□ -1.4
Rtn3-203ENSMUST00000088169 Ubr4A2AN08 5180 aa6.3□□□□□ -1.4
Rtn3-203ENSMUST00000088169 ZanO88799 5376 aa6.3□□□□□ -1.4
Rtn3-203ENSMUST00000088169 LorP18165 486 aa6.26□□□□□ -1.41
Rtn3-203ENSMUST00000088169 Spink7Q6IE32 76 aa6.26□□□□□ -1.41
Rtn3-203ENSMUST00000088169 Gm9112A2AI92 75 aa6.23□□□□□ -1.41
Rtn3-203ENSMUST00000088169 Sprr2a3Q4KL71 83 aa6.23□□□□□ -1.41
Rtn3-203ENSMUST00000088169 Sprr2a1Q9CQK8 83 aa6.23□□□□□ -1.41
Rtn3-203ENSMUST00000088169 Rnf213E9Q555 5152 aaKnown RBP6.22□□□□□ -1.41
Rtn3-203ENSMUST00000088169 Gm11562A0PK51 136 aa6.22□□□□□ -1.41
Rtn3-203ENSMUST00000088169 Ndufaf8A2AMZ4 74 aa6.21□□□□□ -1.42
Rtn3-203ENSMUST00000088169 Fat4Q2PZL6 4981 aa6.2□□□□□ -1.42
Rtn3-203ENSMUST00000088169 Camk2n1Q6QWF9 78 aa6.14□□□□□ -1.43
Rtn3-203ENSMUST00000088169 Lce1dQ9D731 133 aa6.13□□□□□ -1.43
Rtn3-203ENSMUST00000088169 Gm6217A0A1Y7VJK9 128 aa6.09□□□□□ -1.43
Rtn3-203ENSMUST00000088169 Krtap12-1Q9Z287 130 aa6.08□□□□□ -1.44
Rtn3-203ENSMUST00000088169 Gm38119A0A0A6YX29 146 aa6.05□□□□□ -1.44
Rtn3-203ENSMUST00000088169 Krtap19-9aF8WH65 55 aa6.05□□□□□ -1.44
Rtn3-203ENSMUST00000088169 Lce1jD3YUU5 139 aa6.02□□□□□ -1.45
Rtn3-203ENSMUST00000088169 SspoQ8CG65 4998 aa6□□□□□ -1.45
Rtn3-203ENSMUST00000088169 Gm19668J3QMD1 248 aa5.94□□□□□ -1.46
Rtn3-203ENSMUST00000088169 Gm10061D3Z714 54 aa5.87□□□□□ -1.47
Rtn3-203ENSMUST00000088169 Krtap19-2Q925I0 141 aa5.85□□□□□ -1.47
Rtn3-203ENSMUST00000088169 Krtap9-5A2A5X3 358 aa5.81□□□□□ -1.48
Rtn3-203ENSMUST00000088169 Lce1a1Q9CQH5 143 aa5.76□□□□□ -1.49
Rtn3-203ENSMUST00000088169 Lce1gQ9D195 139 aa5.76□□□□□ -1.49
Rtn3-203ENSMUST00000088169 Gm40193A0A1B0GT39 78 aa5.69□□□□□ -1.5
Rtn3-203ENSMUST00000088169 Lce1iQ9D6P5 149 aa5.66□□□□□ -1.5
Rtn3-203ENSMUST00000088169 Krtap7-1Q9D3I6 87 aa5.62□□□□□ -1.51
Rtn3-203ENSMUST00000088169 Muc5bE9Q5I3 4800 aa5.61□□□□□ -1.51
Rtn3-203ENSMUST00000088169 Lce1a2Q9D1K4 149 aa5.59□□□□□ -1.51
Rtn3-203ENSMUST00000088169 Krtap8-1O08633 61 aa5.58□□□□□ -1.52
Rtn3-203ENSMUST00000088169 A0A286YCP9 139 aa5.54□□□□□ -1.52
Rtn3-203ENSMUST00000088169 Krtap19-9bQ99NG9 58 aa5.54□□□□□ -1.52
Rtn3-203ENSMUST00000088169 Gm11569B1AQB1 180 aa5.53□□□□□ -1.52
Rtn3-203ENSMUST00000088169 Gm6358A0A087WPH4 74 aa5.52□□□□□ -1.53
Rtn3-203ENSMUST00000088169 Mt2P02798 61 aa5.42□□□□□ -1.54
Rtn3-203ENSMUST00000088169 Tnp1P10856 55 aa5.4□□□□□ -1.54
Rtn3-203ENSMUST00000088169 Krtap31-1Q9D644 177 aa5.4□□□□□ -1.54
Rtn3-203ENSMUST00000088169 Syne2Q6ZWQ0 6874 aaKnown RBP5.4□□□□□ -1.55
Rtn3-203ENSMUST00000088169 Krtap31-2Q8CAY5 177 aa5.39□□□□□ -1.55
Rtn3-203ENSMUST00000088169 Lce1lQ9D1G7 135 aa5.37□□□□□ -1.55
Rtn3-203ENSMUST00000088169 Gm11596B1AQB0 205 aa5.2□□□□□ -1.58
Rtn3-203ENSMUST00000088169 Krtap22-2J3QNX6 67 aa5.15□□□□□ -1.58
Rtn3-203ENSMUST00000088169 Lce1hQ9D6R3 140 aa5.12□□□□□ -1.59
Rtn3-203ENSMUST00000088169 2310046K23RikA0A0A6YVW6 87 aa5.11□□□□□ -1.59
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms