RNA–Protein interactions for RNA: ENSMUST00000072753.12

Ssbp3-202, Transcript of Single-stranded DNA-binding protein 3, mousemouse

TSL 1 (best) BASIC

Gene Ssbp3, Length 1,924 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3-202ENSMUST00000072753 Gm10337F7DEP7 55 aa12.52□□□□□ -0.41
Ssbp3-202ENSMUST00000072753 4932415D10RikA0A1W2P6U8 4986 aa12.5□□□□□ -0.41
Ssbp3-202ENSMUST00000072753 Sox16Q62247 57 aa12.5□□□□□ -0.41
Ssbp3-202ENSMUST00000072753 4933415A04RikQ9D443 101 aa12.5□□□□□ -0.41
Ssbp3-202ENSMUST00000072753 2210017I01RikA0A0A6YVV1 95 aa12.49□□□□□ -0.41
Ssbp3-202ENSMUST00000072753 Crct1Q6PAI5 102 aa12.45□□□□□ -0.42
Ssbp3-202ENSMUST00000072753 H2al1kJ3QP08 105 aa12.44□□□□□ -0.42
Ssbp3-202ENSMUST00000072753 H2al1mQ9DAD9 105 aa12.44□□□□□ -0.42
Ssbp3-202ENSMUST00000072753 Krtap1-3A2A588 173 aa12.39□□□□□ -0.43
Ssbp3-202ENSMUST00000072753 Krtap3-1A2A591 98 aa12.39□□□□□ -0.43
Ssbp3-202ENSMUST00000072753 Gm17606F6ZL36 78 aa12.39□□□□□ -0.43
Ssbp3-202ENSMUST00000072753 Krtap16-3Q8C1I6 86 aa12.34□□□□□ -0.43
Ssbp3-202ENSMUST00000072753 Krtap13-1Q8K198 168 aa12.34□□□□□ -0.43
Ssbp3-202ENSMUST00000072753 Sec61gP60060 68 aa12.33□□□□□ -0.44
Ssbp3-202ENSMUST00000072753 Gm10382Q3V0T5 144 aa12.29□□□□□ -0.44
Ssbp3-202ENSMUST00000072753 Krtap19-1Q925H2 87 aa12.27□□□□□ -0.45
Ssbp3-202ENSMUST00000072753 ZanO88799 5376 aa12.26□□□□□ -0.45
Ssbp3-202ENSMUST00000072753 Krtap19-3Q925H6 87 aa12.23□□□□□ -0.45
Ssbp3-202ENSMUST00000072753 Fam229aB2KGE5 128 aa12.17□□□□□ -0.46
Ssbp3-202ENSMUST00000072753 Gm10318A0A1W2P728 225 aa12.15□□□□□ -0.46
Ssbp3-202ENSMUST00000072753 Krtap1-5A2A590 122 aa12.13□□□□□ -0.47
Ssbp3-202ENSMUST00000072753 LorP18165 486 aa12.05□□□□□ -0.48
Ssbp3-202ENSMUST00000072753 Fat4Q2PZL6 4981 aa12.02□□□□□ -0.48
Ssbp3-202ENSMUST00000072753 Gm9955Q8CEJ8 102 aa11.99□□□□□ -0.49
Ssbp3-202ENSMUST00000072753 Gm3646F6S692 53 aa11.99□□□□□ -0.49
Ssbp3-202ENSMUST00000072753 Rnf213E9Q555 5152 aaKnown RBP11.99□□□□□ -0.49
Ssbp3-202ENSMUST00000072753 Gm19402J3QJV4 266 aa11.97□□□□□ -0.49
Ssbp3-202ENSMUST00000072753 Gm20537G3UYK7 97 aa11.95□□□□□ -0.5
Ssbp3-202ENSMUST00000072753 1700042G07RikB1AUF7 90 aa11.9□□□□□ -0.5
Ssbp3-202ENSMUST00000072753 BC029722A0A0N4SW31 51 aa11.89□□□□□ -0.51
Ssbp3-202ENSMUST00000072753 Ndufs5Q99LY9 106 aa11.89□□□□□ -0.51
Ssbp3-202ENSMUST00000072753 Krtap1-4Q3V2D6 188 aa11.82□□□□□ -0.52
Ssbp3-202ENSMUST00000072753 Gm19426M0QWC7 77 aa11.62□□□□□ -0.55
Ssbp3-202ENSMUST00000072753 Gm3880A0A1B0GSB3 72 aa11.6□□□□□ -0.55
Ssbp3-202ENSMUST00000072753 SspoQ8CG65 4998 aa11.49□□□□□ -0.57
Ssbp3-202ENSMUST00000072753 Pla2g10Q9QXX3 151 aa11.48□□□□□ -0.57
Ssbp3-202ENSMUST00000072753 Gm10061D3Z714 54 aa11.43□□□□□ -0.58
Ssbp3-202ENSMUST00000072753 B930094E09RikQ8C4T2 136 aa11.37□□□□□ -0.59
Ssbp3-202ENSMUST00000072753 Gm17402F6Z0L5 76 aa11.36□□□□□ -0.59
Ssbp3-202ENSMUST00000072753 Spink7Q6IE32 76 aa11.35□□□□□ -0.59
Ssbp3-202ENSMUST00000072753 CriptO70333 101 aa11.25□□□□□ -0.61
Ssbp3-202ENSMUST00000072753 Sprr2a3Q4KL71 83 aa11.21□□□□□ -0.62
Ssbp3-202ENSMUST00000072753 Sprr2a1Q9CQK8 83 aa11.21□□□□□ -0.62
Ssbp3-202ENSMUST00000072753 Lce1jD3YUU5 139 aa11.15□□□□□ -0.62
Ssbp3-202ENSMUST00000072753 Gm12216A0A1W2P827 62 aa11.09□□□□□ -0.63
Ssbp3-202ENSMUST00000072753 Krtap12-1Q9Z287 130 aa11.09□□□□□ -0.63
Ssbp3-202ENSMUST00000072753 Romo1P60603 79 aa11.01□□□□□ -0.65
Ssbp3-202ENSMUST00000072753 Gm11569B1AQB1 180 aa11□□□□□ -0.65
Ssbp3-202ENSMUST00000072753 Krtap19-9aF8WH65 55 aa10.96□□□□□ -0.65
Ssbp3-202ENSMUST00000072753 Krtap19-2Q925I0 141 aa10.94□□□□□ -0.66
Ssbp3-202ENSMUST00000072753 Krtap17-1A2A5X6 109 aa10.9□□□□□ -0.67
Ssbp3-202ENSMUST00000072753 Gm21887J3QQ04 176 aa10.89□□□□□ -0.67
Ssbp3-202ENSMUST00000072753 Krtap9-5A2A5X3 358 aa10.88□□□□□ -0.67
Ssbp3-202ENSMUST00000072753 Prm2P07978 107 aa10.77□□□□□ -0.69
Ssbp3-202ENSMUST00000072753 Muc5bE9Q5I3 4800 aa10.63□□□□□ -0.71
Ssbp3-202ENSMUST00000072753 Gm19668J3QMD1 248 aa10.61□□□□□ -0.71
Ssbp3-202ENSMUST00000072753 Camk2n1Q6QWF9 78 aa10.5□□□□□ -0.73
Ssbp3-202ENSMUST00000072753 Lce1iQ9D6P5 149 aa10.48□□□□□ -0.73
Ssbp3-202ENSMUST00000072753 Gm6358A0A087WPH4 74 aa10.39□□□□□ -0.75
Ssbp3-202ENSMUST00000072753 Krtap4-2B1AQ85 167 aa10.39□□□□□ -0.75
Ssbp3-202ENSMUST00000072753 Lce1a2Q9D1K4 149 aa10.35□□□□□ -0.75
Ssbp3-202ENSMUST00000072753 Lce1gQ9D195 139 aa10.33□□□□□ -0.76
Ssbp3-202ENSMUST00000072753 Gm11562A0PK51 136 aa10.25□□□□□ -0.77
Ssbp3-202ENSMUST00000072753 Gm11555B1AQ89 175 aa10.23□□□□□ -0.77
Ssbp3-202ENSMUST00000072753 Mdn1A2ANY6 5589 aaKnown RBP10.19□□□□□ -0.78
Ssbp3-202ENSMUST00000072753 Krtap4-6Q3V4B7 195 aa10.07□□□□□ -0.8
Ssbp3-202ENSMUST00000072753 Krtap7-1Q9D3I6 87 aa10.07□□□□□ -0.8
Ssbp3-202ENSMUST00000072753 Syne2Q6ZWQ0 6874 aaKnown RBP10.07□□□□□ -0.8
Ssbp3-202ENSMUST00000072753 Krtap8-1O08633 61 aa10.04□□□□□ -0.8
Ssbp3-202ENSMUST00000072753 Mt2P02798 61 aa10.02□□□□□ -0.81
Ssbp3-202ENSMUST00000072753 Gm11596B1AQB0 205 aa9.99□□□□□ -0.81
Ssbp3-202ENSMUST00000072753 Krtap19-9bQ99NG9 58 aa9.95□□□□□ -0.82
Ssbp3-202ENSMUST00000072753 Gm40193A0A1B0GT39 78 aa9.9□□□□□ -0.83
Ssbp3-202ENSMUST00000072753 Krtap4-1Q3UUY3 169 aa9.88□□□□□ -0.83
Ssbp3-202ENSMUST00000072753 Mp68P56379 58 aa9.72□□□□□ -0.85
Ssbp3-202ENSMUST00000072753 Gm11564A2A4L9 201 aa9.62□□□□□ -0.87
Ssbp3-202ENSMUST00000072753 Gm11563B1AQ90 168 aa9.62□□□□□ -0.87
Ssbp3-202ENSMUST00000072753 Gm11595B1AQA7 289 aa9.62□□□□□ -0.87
Ssbp3-202ENSMUST00000072753 Krtap4-8B1AQA8 209 aa9.62□□□□□ -0.87
Ssbp3-202ENSMUST00000072753 Tnp1P10856 55 aa9.56□□□□□ -0.88
Ssbp3-202ENSMUST00000072753 Gm20538F6Z9R1 75 aa9.5□□□□□ -0.89
Ssbp3-202ENSMUST00000072753 Krtap22-2J3QNX6 67 aa9.5□□□□□ -0.89
Ssbp3-202ENSMUST00000072753 Krtap9-3Q3V2C1 136 aa9.44□□□□□ -0.9
Ssbp3-202ENSMUST00000072753 Lce1hQ9D6R3 140 aa9.36□□□□□ -0.91
Ssbp3-202ENSMUST00000072753 Krtap4-9B1AQA9 244 aa9.35□□□□□ -0.91
Ssbp3-202ENSMUST00000072753 Mt4P47945 62 aa9.29□□□□□ -0.92
Ssbp3-202ENSMUST00000072753 Fsip2A2ARZ3 6995 aa9.18□□□□□ -0.94
Ssbp3-202ENSMUST00000072753 Lce1bQ9D149 137 aa9.09□□□□□ -0.95
Ssbp3-202ENSMUST00000072753 2310046K23RikA0A0A6YVW6 87 aa9.08□□□□□ -0.96
Ssbp3-202ENSMUST00000072753 Krtap4-13Q9D7P3 165 aa9.01□□□□□ -0.97
Ssbp3-202ENSMUST00000072753 Gm38119A0A0A6YX29 146 aa8.93□□□□□ -0.98
Ssbp3-202ENSMUST00000072753 Sprr2kO70562 68 aa8.8□□□□□ -1
Ssbp3-202ENSMUST00000072753 2300003K06RikA2A4M0 262 aa8.79□□□□□ -1
Ssbp3-202ENSMUST00000072753 Ndufaf8A2AMZ4 74 aa8.74□□□□□ -1.01
Ssbp3-202ENSMUST00000072753 Gm10272F7CZ33 110 aa8.72□□□□□ -1.01
Ssbp3-202ENSMUST00000072753 Krtap6-3A0A087WQL6 57 aa8.7□□□□□ -1.02
Ssbp3-202ENSMUST00000072753 Krtap4-7Q9D732 168 aa8.61□□□□□ -1.03
Ssbp3-202ENSMUST00000072753 Lce1lQ9D1G7 135 aa8.52□□□□□ -1.05
Ssbp3-202ENSMUST00000072753 Gm11938Q9D3H4 131 aa8.32□□□□□ -1.08
Ssbp3-202ENSMUST00000072753 Lce1dQ9D731 133 aa8.31□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 14.3 ms