RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Dnah9B1AR51 4484 aa6.03□□□□□ -1.44
Pcdha1-201ENSMUST00000070797 Dnah7bL7N1Y0 4068 aa6.03□□□□□ -1.44
Pcdha1-201ENSMUST00000070797 Kmt2aP55200 3966 aa6.03□□□□□ -1.44
Pcdha1-201ENSMUST00000070797 Krtap19-9bQ99NG9 58 aa6.02□□□□□ -1.44
Pcdha1-201ENSMUST00000070797 Dnah2P0C6F1 4456 aa6□□□□□ -1.45
Pcdha1-201ENSMUST00000070797 TnxbO35452 4006 aa5.97□□□□□ -1.45
Pcdha1-201ENSMUST00000070797 Dnah1E9Q8T7 4250 aa5.97□□□□□ -1.45
Pcdha1-201ENSMUST00000070797 Dnah6E9Q0B6 4144 aa5.87□□□□□ -1.47
Pcdha1-201ENSMUST00000070797 ApobE9Q414 4505 aa5.86□□□□□ -1.47
Pcdha1-201ENSMUST00000070797 SacsQ9JLC8 4582 aa5.85□□□□□ -1.47
Pcdha1-201ENSMUST00000070797 Krtap8-1O08633 61 aa5.85□□□□□ -1.47
Pcdha1-201ENSMUST00000070797 LorP18165 486 aa5.84□□□□□ -1.47
Pcdha1-201ENSMUST00000070797 Csmd3Q80T79 3707 aa5.84□□□□□ -1.47
Pcdha1-201ENSMUST00000070797 Krtap12-1Q9Z287 130 aa5.83□□□□□ -1.48
Pcdha1-201ENSMUST00000070797 Gm6358A0A087WPH4 74 aa5.81□□□□□ -1.48
Pcdha1-201ENSMUST00000070797 Dync1h1Q9JHU4 4644 aaKnown RBP5.8□□□□□ -1.48
Pcdha1-201ENSMUST00000070797 Sprr2kO70562 68 aa5.79□□□□□ -1.48
Pcdha1-201ENSMUST00000070797 Hectd4E9Q2E4 4418 aa5.75□□□□□ -1.49
Pcdha1-201ENSMUST00000070797 Lrp1bQ9JI18 4599 aa5.75□□□□□ -1.49
Pcdha1-201ENSMUST00000070797 Pkd1O08852 4293 aa5.74□□□□□ -1.49
Pcdha1-201ENSMUST00000070797 PrkdcP97313 4128 aa5.73□□□□□ -1.49
Pcdha1-201ENSMUST00000070797 2310046K23RikA0A0A6YVW6 87 aa5.72□□□□□ -1.49
Pcdha1-201ENSMUST00000070797 Lce1mQ9CR91 182 aa5.66□□□□□ -1.5
Pcdha1-201ENSMUST00000070797 Fras1Q80T14 4010 aa5.51□□□□□ -1.53
Pcdha1-201ENSMUST00000070797 Sprr2gO70558 76 aa5.51□□□□□ -1.53
Pcdha1-201ENSMUST00000070797 Dnah7cA0A087WR13 4024 aa5.5□□□□□ -1.53
Pcdha1-201ENSMUST00000070797 Fat1A0A1L1SQU7 4645 aa5.47□□□□□ -1.53
Pcdha1-201ENSMUST00000070797 Fat2Q5F226 4351 aa5.46□□□□□ -1.54
Pcdha1-201ENSMUST00000070797 Dnah7aE9Q0T8 4024 aa5.45□□□□□ -1.54
Pcdha1-201ENSMUST00000070797 Fat3Q8BNA6 4555 aa5.43□□□□□ -1.54
Pcdha1-201ENSMUST00000070797 Ryr1E9PZQ0 5035 aa5.41□□□□□ -1.54
Pcdha1-201ENSMUST00000070797 Prm1P02319 51 aa5.4□□□□□ -1.55
Pcdha1-201ENSMUST00000070797 Dnah8Q91XQ0 4731 aa5.39□□□□□ -1.55
Pcdha1-201ENSMUST00000070797 Gm10100J3QK64 120 aa5.37□□□□□ -1.55
Pcdha1-201ENSMUST00000070797 Krtap16-3Q8C1I6 86 aa5.35□□□□□ -1.55
Pcdha1-201ENSMUST00000070797 Gm10272F7CZ33 110 aa5.33□□□□□ -1.56
Pcdha1-201ENSMUST00000070797 Lrp1Q91ZX7 4545 aaKnown RBP5.3□□□□□ -1.56
Pcdha1-201ENSMUST00000070797 Ryr2E9Q401 4966 aaKnown RBP5.29□□□□□ -1.56
Pcdha1-201ENSMUST00000070797 Krtap19-3Q925H6 87 aa5.29□□□□□ -1.56
Pcdha1-201ENSMUST00000070797 Mycbp2Q7TPH6 4711 aa5.29□□□□□ -1.56
Pcdha1-201ENSMUST00000070797 Gm10142J3KMP7 120 aa5.29□□□□□ -1.56
Pcdha1-201ENSMUST00000070797 Krtap9-5A2A5X3 358 aa5.26□□□□□ -1.57
Pcdha1-201ENSMUST00000070797 Lce3bQ9CQM7 98 aa5.23□□□□□ -1.57
Pcdha1-201ENSMUST00000070797 Krtap19-1Q925H2 87 aa5.23□□□□□ -1.57
Pcdha1-201ENSMUST00000070797 Ryr3A2AGL3 4863 aa5.22□□□□□ -1.57
Pcdha1-201ENSMUST00000070797 Vps13bQ80TY5 3993 aa5.21□□□□□ -1.58
Pcdha1-201ENSMUST00000070797 Pkhd1l1Q80ZA4 4249 aa5.2□□□□□ -1.58
Pcdha1-201ENSMUST00000070797 Gm7735D3YX18 52 aa5.15□□□□□ -1.58
Pcdha1-201ENSMUST00000070797 Dnhd1D3Z2X2 4750 aa5.12□□□□□ -1.59
Pcdha1-201ENSMUST00000070797 Lce3cQ91V05 98 aa5.1□□□□□ -1.59
Pcdha1-201ENSMUST00000070797 Lce3eF8VQJ0 98 aa5.02□□□□□ -1.61
Pcdha1-201ENSMUST00000070797 Lce3fQ6PAI4 98 aa5.02□□□□□ -1.61
Pcdha1-201ENSMUST00000070797 Krtap9-3Q3V2C1 136 aa5.01□□□□□ -1.61
Pcdha1-201ENSMUST00000070797 Gm9789Q8BIG3 52 aa5□□□□□ -1.61
Pcdha1-201ENSMUST00000070797 Krtap22-2J3QNX6 67 aa4.99□□□□□ -1.61
Pcdha1-201ENSMUST00000070797 Lce3dE9Q8V1 98 aa4.98□□□□□ -1.61
Pcdha1-201ENSMUST00000070797 Mt2P02798 61 aa4.97□□□□□ -1.61
Pcdha1-201ENSMUST00000070797 Herc2Q4U2R1 4836 aa4.97□□□□□ -1.61
Pcdha1-201ENSMUST00000070797 Pkhd1E9PZ36 4059 aa4.96□□□□□ -1.62
Pcdha1-201ENSMUST00000070797 Gm38119A0A0A6YX29 146 aa4.95□□□□□ -1.62
Pcdha1-201ENSMUST00000070797 Kiaa1109A2AAE1 5005 aa4.94□□□□□ -1.62
Pcdha1-201ENSMUST00000070797 Krtap1-3A2A588 173 aa4.93□□□□□ -1.62
Pcdha1-201ENSMUST00000070797 Krtap19-4Q925H7 84 aa4.93□□□□□ -1.62
Pcdha1-201ENSMUST00000070797 Lce3aQ497I5 98 aa4.92□□□□□ -1.62
Pcdha1-201ENSMUST00000070797 Sprr2iO70560 76 aa4.9□□□□□ -1.62
Pcdha1-201ENSMUST00000070797 Krtap19-2Q925I0 141 aa4.9□□□□□ -1.63
Pcdha1-201ENSMUST00000070797 Herc1E9PZP8 4859 aa4.9□□□□□ -1.63
Pcdha1-201ENSMUST00000070797 Lce1jD3YUU5 139 aa4.88□□□□□ -1.63
Pcdha1-201ENSMUST00000070797 Lrp2A2ARV4 4660 aa4.88□□□□□ -1.63
Pcdha1-201ENSMUST00000070797 HydinQ80W93 5154 aa4.87□□□□□ -1.63
Pcdha1-201ENSMUST00000070797 Gm10061D3Z714 54 aa4.83□□□□□ -1.64
Pcdha1-201ENSMUST00000070797 Gm11569B1AQB1 180 aa4.79□□□□□ -1.64
Pcdha1-201ENSMUST00000070797 Kmt2cQ8BRH4 4903 aa4.78□□□□□ -1.64
Pcdha1-201ENSMUST00000070797 Birc6O88738 4882 aa4.78□□□□□ -1.64
Pcdha1-201ENSMUST00000070797 Gm10024A0A0A0MQA4 119 aa4.73□□□□□ -1.65
Pcdha1-201ENSMUST00000070797 PcloQ9QYX7 5068 aa4.69□□□□□ -1.66
Pcdha1-201ENSMUST00000070797 Sprr2dO70555 85 aa4.69□□□□□ -1.66
Pcdha1-201ENSMUST00000070797 Abca13Q5SSE9 5034 aa4.66□□□□□ -1.66
Pcdha1-201ENSMUST00000070797 Krtap4-2B1AQ85 167 aa4.66□□□□□ -1.66
Pcdha1-201ENSMUST00000070797 Sprr2fO70557 76 aa4.65□□□□□ -1.67
Pcdha1-201ENSMUST00000070797 Lce1fB9EJP6 147 aa4.65□□□□□ -1.67
Pcdha1-201ENSMUST00000070797 Lce1cQ9D1C5 147 aa4.65□□□□□ -1.67
Pcdha1-201ENSMUST00000070797 Lce1lQ9D1G7 135 aa4.65□□□□□ -1.67
Pcdha1-201ENSMUST00000070797 Lce1dQ9D731 133 aa4.65□□□□□ -1.67
Pcdha1-201ENSMUST00000070797 Lce1bQ9D149 137 aa4.63□□□□□ -1.67
Pcdha1-201ENSMUST00000070797 Lce1gQ9D195 139 aa4.63□□□□□ -1.67
Pcdha1-201ENSMUST00000070797 Lce1iQ9D6P5 149 aa4.63□□□□□ -1.67
Pcdha1-201ENSMUST00000070797 Lce1hQ9D6R3 140 aa4.63□□□□□ -1.67
Pcdha1-201ENSMUST00000070797 Sprr2hO70559 108 aa4.59□□□□□ -1.67
Pcdha1-201ENSMUST00000070797 Gm11938Q9D3H4 131 aa4.57□□□□□ -1.68
Pcdha1-201ENSMUST00000070797 Mt4P47945 62 aa4.54□□□□□ -1.68
Pcdha1-201ENSMUST00000070797 A0A1Y7VLE6 161 aa4.54□□□□□ -1.68
Pcdha1-201ENSMUST00000070797 Krtap31-1Q9D644 177 aa4.52□□□□□ -1.69
Pcdha1-201ENSMUST00000070797 Sprr2eO70556 76 aa4.5□□□□□ -1.69
Pcdha1-201ENSMUST00000070797 Krtap4-6Q3V4B7 195 aa4.5□□□□□ -1.69
Pcdha1-201ENSMUST00000070797 Lce1eQ9D139 143 aa4.5□□□□□ -1.69
Pcdha1-201ENSMUST00000070797 Lce1a2Q9D1K4 149 aa4.48□□□□□ -1.69
Pcdha1-201ENSMUST00000070797 4932415D10RikA0A1W2P6U8 4986 aa4.46□□□□□ -1.7
Pcdha1-201ENSMUST00000070797 Mdn1A2ANY6 5589 aaKnown RBP4.4□□□□□ -1.7
Pcdha1-201ENSMUST00000070797 Hmcn2A2AJ76 5100 aa4.34□□□□□ -1.71
Retrieved 100 of 22,080 RNA–protein pairs in 60.5 ms