RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Ndufs5Q99LY9 106 aa8.11□□□□□ -1.11
Trim50-201ENSMUST00000065785 Gm17606F6ZL36 78 aa8.06□□□□□ -1.12
Trim50-201ENSMUST00000065785 Ush2AQ2QI47 5193 aa8.04□□□□□ -1.12
Trim50-201ENSMUST00000065785 2210017I01RikA0A0A6YVV1 95 aa8.01□□□□□ -1.13
Trim50-201ENSMUST00000065785 1700042G07RikB1AUF7 90 aa8.01□□□□□ -1.13
Trim50-201ENSMUST00000065785 Krtap3-1A2A591 98 aa7.99□□□□□ -1.13
Trim50-201ENSMUST00000065785 Prm1P02319 51 aa7.99□□□□□ -1.13
Trim50-201ENSMUST00000065785 Gm20537G3UYK7 97 aa7.97□□□□□ -1.13
Trim50-201ENSMUST00000065785 Gm10382Q3V0T5 144 aa7.96□□□□□ -1.13
Trim50-201ENSMUST00000065785 Pla2g10Q9QXX3 151 aa7.96□□□□□ -1.13
Trim50-201ENSMUST00000065785 Gm9955Q8CEJ8 102 aa7.96□□□□□ -1.14
Trim50-201ENSMUST00000065785 Gm9789Q8BIG3 52 aa7.94□□□□□ -1.14
Trim50-201ENSMUST00000065785 Gm7735D3YX18 52 aa7.94□□□□□ -1.14
Trim50-201ENSMUST00000065785 Hmcn2A2AJ76 5100 aa7.91□□□□□ -1.14
Trim50-201ENSMUST00000065785 Sec61bQ9CQS8 96 aaKnown RBP7.91□□□□□ -1.14
Trim50-201ENSMUST00000065785 Ubr4A2AN08 5180 aa7.85□□□□□ -1.15
Trim50-201ENSMUST00000065785 Krtap13-1Q8K198 168 aa7.78□□□□□ -1.16
Trim50-201ENSMUST00000065785 Gm3880A0A1B0GSB3 72 aa7.75□□□□□ -1.17
Trim50-201ENSMUST00000065785 4932415D10RikA0A1W2P6U8 4986 aa7.75□□□□□ -1.17
Trim50-201ENSMUST00000065785 2310057N15RikQ9D6T8 200 aa7.74□□□□□ -1.17
Trim50-201ENSMUST00000065785 A0A1Y7VJH8 109 aa7.7□□□□□ -1.18
Trim50-201ENSMUST00000065785 Krtap1-5A2A590 122 aa7.68□□□□□ -1.18
Trim50-201ENSMUST00000065785 BC029722A0A0N4SW31 51 aa7.67□□□□□ -1.18
Trim50-201ENSMUST00000065785 Krtap1-3A2A588 173 aa7.62□□□□□ -1.19
Trim50-201ENSMUST00000065785 Fam229aB2KGE5 128 aa7.6□□□□□ -1.19
Trim50-201ENSMUST00000065785 Krtap16-3Q8C1I6 86 aa7.57□□□□□ -1.2
Trim50-201ENSMUST00000065785 Crct1Q6PAI5 102 aa7.55□□□□□ -1.2
Trim50-201ENSMUST00000065785 ZanO88799 5376 aa7.54□□□□□ -1.2
Trim50-201ENSMUST00000065785 Gm17402F6Z0L5 76 aa7.5□□□□□ -1.21
Trim50-201ENSMUST00000065785 Krtap19-1Q925H2 87 aa7.5□□□□□ -1.21
Trim50-201ENSMUST00000065785 Gm12216A0A1W2P827 62 aa7.49□□□□□ -1.21
Trim50-201ENSMUST00000065785 Gm7544A0A1Y7VJ58 118 aa7.48□□□□□ -1.21
Trim50-201ENSMUST00000065785 Romo1P60603 79 aa7.47□□□□□ -1.21
Trim50-201ENSMUST00000065785 B930094E09RikQ8C4T2 136 aa7.47□□□□□ -1.21
Trim50-201ENSMUST00000065785 A0A1Y7VLE6 161 aa7.45□□□□□ -1.22
Trim50-201ENSMUST00000065785 Krtap19-3Q925H6 87 aa7.45□□□□□ -1.22
Trim50-201ENSMUST00000065785 Fat4Q2PZL6 4981 aa7.41□□□□□ -1.22
Trim50-201ENSMUST00000065785 LorP18165 486 aa7.37□□□□□ -1.23
Trim50-201ENSMUST00000065785 Gm19426M0QWC7 77 aa7.36□□□□□ -1.23
Trim50-201ENSMUST00000065785 Gm10318A0A1W2P728 225 aa7.34□□□□□ -1.24
Trim50-201ENSMUST00000065785 Rnf213E9Q555 5152 aaKnown RBP7.33□□□□□ -1.24
Trim50-201ENSMUST00000065785 Gm19402J3QJV4 266 aa7.29□□□□□ -1.24
Trim50-201ENSMUST00000065785 Krtap28-10A0A1Y7VP58 119 aa7.27□□□□□ -1.25
Trim50-201ENSMUST00000065785 Sprr2a3Q4KL71 83 aa7.27□□□□□ -1.25
Trim50-201ENSMUST00000065785 Sprr2a1Q9CQK8 83 aa7.27□□□□□ -1.25
Trim50-201ENSMUST00000065785 Krtap1-4Q3V2D6 188 aa7.24□□□□□ -1.25
Trim50-201ENSMUST00000065785 CriptO70333 101 aa7.22□□□□□ -1.25
Trim50-201ENSMUST00000065785 Gm21887J3QQ04 176 aa7.21□□□□□ -1.26
Trim50-201ENSMUST00000065785 Spink7Q6IE32 76 aa7.2□□□□□ -1.26
Trim50-201ENSMUST00000065785 Gm10061D3Z714 54 aa7.06□□□□□ -1.28
Trim50-201ENSMUST00000065785 SspoQ8CG65 4998 aa7.03□□□□□ -1.28
Trim50-201ENSMUST00000065785 A030005L19RikA0A1Y7VIU2 113 aa7.02□□□□□ -1.29
Trim50-201ENSMUST00000065785 Krtap12-1Q9Z287 130 aa6.91□□□□□ -1.3
Trim50-201ENSMUST00000065785 Lce1jD3YUU5 139 aa6.89□□□□□ -1.31
Trim50-201ENSMUST00000065785 Krtap19-9aF8WH65 55 aa6.87□□□□□ -1.31
Trim50-201ENSMUST00000065785 A0A286YCP9 139 aa6.85□□□□□ -1.31
Trim50-201ENSMUST00000065785 Krtap7-1Q9D3I6 87 aa6.85□□□□□ -1.31
Trim50-201ENSMUST00000065785 Gm40193A0A1B0GT39 78 aa6.83□□□□□ -1.32
Trim50-201ENSMUST00000065785 Gm19668J3QMD1 248 aa6.83□□□□□ -1.32
Trim50-201ENSMUST00000065785 Camk2n1Q6QWF9 78 aa6.83□□□□□ -1.32
Trim50-201ENSMUST00000065785 Gm11569B1AQB1 180 aa6.8□□□□□ -1.32
Trim50-201ENSMUST00000065785 A030005K14RikA0A1Y7VNY1 122 aa6.78□□□□□ -1.32
Trim50-201ENSMUST00000065785 Mp68P56379 58 aa6.72□□□□□ -1.33
Trim50-201ENSMUST00000065785 Prm2P07978 107 aa6.67□□□□□ -1.34
Trim50-201ENSMUST00000065785 Krtap19-2Q925I0 141 aa6.66□□□□□ -1.34
Trim50-201ENSMUST00000065785 Krtap9-5A2A5X3 358 aa6.63□□□□□ -1.35
Trim50-201ENSMUST00000065785 A030003K21RikA0A1Y7VIM3 128 aa6.6□□□□□ -1.35
Trim50-201ENSMUST00000065785 Gm6217A0A1Y7VJK9 128 aa6.6□□□□□ -1.35
Trim50-201ENSMUST00000065785 Muc5bE9Q5I3 4800 aa6.52□□□□□ -1.37
Trim50-201ENSMUST00000065785 Gm20538F6Z9R1 75 aa6.52□□□□□ -1.37
Trim50-201ENSMUST00000065785 Krtap28-13A0A087WQP5 138 aa6.51□□□□□ -1.37
Trim50-201ENSMUST00000065785 Gm11562A0PK51 136 aa6.5□□□□□ -1.37
Trim50-201ENSMUST00000065785 Lce1iQ9D6P5 149 aa6.48□□□□□ -1.37
Trim50-201ENSMUST00000065785 Krtap4-2B1AQ85 167 aa6.48□□□□□ -1.37
Trim50-201ENSMUST00000065785 Krtap8-1O08633 61 aa6.47□□□□□ -1.37
Trim50-201ENSMUST00000065785 Lce1gQ9D195 139 aa6.43□□□□□ -1.38
Trim50-201ENSMUST00000065785 Lce1a2Q9D1K4 149 aa6.41□□□□□ -1.38
Trim50-201ENSMUST00000065785 Gm11555B1AQ89 175 aa6.38□□□□□ -1.39
Trim50-201ENSMUST00000065785 Krtap19-9bQ99NG9 58 aa6.38□□□□□ -1.39
Trim50-201ENSMUST00000065785 Tnp1P10856 55 aa6.36□□□□□ -1.39
Trim50-201ENSMUST00000065785 Gm6358A0A087WPH4 74 aa6.34□□□□□ -1.39
Trim50-201ENSMUST00000065785 Mdn1A2ANY6 5589 aaKnown RBP6.26□□□□□ -1.41
Trim50-201ENSMUST00000065785 Syne2Q6ZWQ0 6874 aaKnown RBP6.23□□□□□ -1.41
Trim50-201ENSMUST00000065785 Krtap4-6Q3V4B7 195 aa6.22□□□□□ -1.41
Trim50-201ENSMUST00000065785 Gm11596B1AQB0 205 aa6.22□□□□□ -1.41
Trim50-201ENSMUST00000065785 Ndufaf8A2AMZ4 74 aa6.18□□□□□ -1.42
Trim50-201ENSMUST00000065785 Mt2P02798 61 aa6.13□□□□□ -1.43
Trim50-201ENSMUST00000065785 Krtap4-1Q3UUY3 169 aa6.11□□□□□ -1.43
Trim50-201ENSMUST00000065785 2310046K23RikA0A0A6YVW6 87 aa6.09□□□□□ -1.44
Trim50-201ENSMUST00000065785 Krtap9-3Q3V2C1 136 aa5.99□□□□□ -1.45
Trim50-201ENSMUST00000065785 Gm11564A2A4L9 201 aa5.96□□□□□ -1.46
Trim50-201ENSMUST00000065785 Gm11563B1AQ90 168 aa5.96□□□□□ -1.46
Trim50-201ENSMUST00000065785 Gm11595B1AQA7 289 aa5.96□□□□□ -1.46
Trim50-201ENSMUST00000065785 Krtap4-8B1AQA8 209 aa5.96□□□□□ -1.46
Trim50-201ENSMUST00000065785 Lce1hQ9D6R3 140 aa5.95□□□□□ -1.46
Trim50-201ENSMUST00000065785 Krtap22-2J3QNX6 67 aa5.8□□□□□ -1.48
Trim50-201ENSMUST00000065785 Krtap4-9B1AQA9 244 aa5.78□□□□□ -1.48
Trim50-201ENSMUST00000065785 Mt4P47945 62 aa5.73□□□□□ -1.49
Trim50-201ENSMUST00000065785 A0A1Y7VJ07 166 aa5.68□□□□□ -1.5
Trim50-201ENSMUST00000065785 Fsip2A2ARZ3 6995 aa5.66□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 53 ms