RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Ndufs5Q99LY9 106 aa8.11□□□□□ -1.11
Trim50-201ENSMUST00000065785 Gm17606F6ZL36 78 aa8.06□□□□□ -1.12
Trim50-201ENSMUST00000065785 Ush2AQ2QI47 5193 aa8.04□□□□□ -1.12
Trim50-201ENSMUST00000065785 2210017I01RikA0A0A6YVV1 95 aa8.01□□□□□ -1.13
Trim50-201ENSMUST00000065785 1700042G07RikB1AUF7 90 aa8.01□□□□□ -1.13
Trim50-201ENSMUST00000065785 Krtap3-1A2A591 98 aa7.99□□□□□ -1.13
Trim50-201ENSMUST00000065785 Prm1P02319 51 aa7.99□□□□□ -1.13
Trim50-201ENSMUST00000065785 Gm20537G3UYK7 97 aa7.97□□□□□ -1.13
Trim50-201ENSMUST00000065785 Gm10382Q3V0T5 144 aa7.96□□□□□ -1.13
Trim50-201ENSMUST00000065785 Pla2g10Q9QXX3 151 aa7.96□□□□□ -1.13
Trim50-201ENSMUST00000065785 Gm9955Q8CEJ8 102 aa7.96□□□□□ -1.14
Trim50-201ENSMUST00000065785 Gm9789Q8BIG3 52 aa7.94□□□□□ -1.14
Trim50-201ENSMUST00000065785 Gm7735D3YX18 52 aa7.94□□□□□ -1.14
Trim50-201ENSMUST00000065785 Hmcn2A2AJ76 5100 aa7.91□□□□□ -1.14
Trim50-201ENSMUST00000065785 Sec61bQ9CQS8 96 aaKnown RBP7.91□□□□□ -1.14
Trim50-201ENSMUST00000065785 Ubr4A2AN08 5180 aa7.85□□□□□ -1.15
Trim50-201ENSMUST00000065785 Krtap13-1Q8K198 168 aa7.78□□□□□ -1.16
Trim50-201ENSMUST00000065785 Gm3880A0A1B0GSB3 72 aa7.75□□□□□ -1.17
Trim50-201ENSMUST00000065785 4932415D10RikA0A1W2P6U8 4986 aa7.75□□□□□ -1.17
Trim50-201ENSMUST00000065785 2310057N15RikQ9D6T8 200 aa7.74□□□□□ -1.17
Trim50-201ENSMUST00000065785 A0A1Y7VJH8 109 aa7.7□□□□□ -1.18
Trim50-201ENSMUST00000065785 Krtap1-5A2A590 122 aa7.68□□□□□ -1.18
Trim50-201ENSMUST00000065785 BC029722A0A0N4SW31 51 aa7.67□□□□□ -1.18
Trim50-201ENSMUST00000065785 Krtap1-3A2A588 173 aa7.62□□□□□ -1.19
Trim50-201ENSMUST00000065785 Fam229aB2KGE5 128 aa7.6□□□□□ -1.19
Trim50-201ENSMUST00000065785 Krtap16-3Q8C1I6 86 aa7.57□□□□□ -1.2
Trim50-201ENSMUST00000065785 Crct1Q6PAI5 102 aa7.55□□□□□ -1.2
Trim50-201ENSMUST00000065785 ZanO88799 5376 aa7.54□□□□□ -1.2
Trim50-201ENSMUST00000065785 Gm17402F6Z0L5 76 aa7.5□□□□□ -1.21
Trim50-201ENSMUST00000065785 Krtap19-1Q925H2 87 aa7.5□□□□□ -1.21
Trim50-201ENSMUST00000065785 Gm12216A0A1W2P827 62 aa7.49□□□□□ -1.21
Trim50-201ENSMUST00000065785 Gm7544A0A1Y7VJ58 118 aa7.48□□□□□ -1.21
Trim50-201ENSMUST00000065785 Romo1P60603 79 aa7.47□□□□□ -1.21
Trim50-201ENSMUST00000065785 B930094E09RikQ8C4T2 136 aa7.47□□□□□ -1.21
Trim50-201ENSMUST00000065785 A0A1Y7VLE6 161 aa7.45□□□□□ -1.22
Trim50-201ENSMUST00000065785 Krtap19-3Q925H6 87 aa7.45□□□□□ -1.22
Trim50-201ENSMUST00000065785 Fat4Q2PZL6 4981 aa7.41□□□□□ -1.22
Trim50-201ENSMUST00000065785 LorP18165 486 aa7.37□□□□□ -1.23
Trim50-201ENSMUST00000065785 Gm19426M0QWC7 77 aa7.36□□□□□ -1.23
Trim50-201ENSMUST00000065785 Gm10318A0A1W2P728 225 aa7.34□□□□□ -1.24
Trim50-201ENSMUST00000065785 Rnf213E9Q555 5152 aaKnown RBP7.33□□□□□ -1.24
Trim50-201ENSMUST00000065785 Gm19402J3QJV4 266 aa7.29□□□□□ -1.24
Trim50-201ENSMUST00000065785 Krtap28-10A0A1Y7VP58 119 aa7.27□□□□□ -1.25
Trim50-201ENSMUST00000065785 Sprr2a3Q4KL71 83 aa7.27□□□□□ -1.25
Trim50-201ENSMUST00000065785 Sprr2a1Q9CQK8 83 aa7.27□□□□□ -1.25
Trim50-201ENSMUST00000065785 Krtap1-4Q3V2D6 188 aa7.24□□□□□ -1.25
Trim50-201ENSMUST00000065785 CriptO70333 101 aa7.22□□□□□ -1.25
Trim50-201ENSMUST00000065785 Gm21887J3QQ04 176 aa7.21□□□□□ -1.26
Trim50-201ENSMUST00000065785 Spink7Q6IE32 76 aa7.2□□□□□ -1.26
Trim50-201ENSMUST00000065785 Gm10061D3Z714 54 aa7.06□□□□□ -1.28
Trim50-201ENSMUST00000065785 SspoQ8CG65 4998 aa7.03□□□□□ -1.28
Trim50-201ENSMUST00000065785 A030005L19RikA0A1Y7VIU2 113 aa7.02□□□□□ -1.29
Trim50-201ENSMUST00000065785 Krtap12-1Q9Z287 130 aa6.91□□□□□ -1.3
Trim50-201ENSMUST00000065785 Lce1jD3YUU5 139 aa6.89□□□□□ -1.31
Trim50-201ENSMUST00000065785 Krtap19-9aF8WH65 55 aa6.87□□□□□ -1.31
Trim50-201ENSMUST00000065785 A0A286YCP9 139 aa6.85□□□□□ -1.31
Trim50-201ENSMUST00000065785 Krtap7-1Q9D3I6 87 aa6.85□□□□□ -1.31
Trim50-201ENSMUST00000065785 Gm40193A0A1B0GT39 78 aa6.83□□□□□ -1.32
Trim50-201ENSMUST00000065785 Gm19668J3QMD1 248 aa6.83□□□□□ -1.32
Trim50-201ENSMUST00000065785 Camk2n1Q6QWF9 78 aa6.83□□□□□ -1.32
Trim50-201ENSMUST00000065785 Gm11569B1AQB1 180 aa6.8□□□□□ -1.32
Trim50-201ENSMUST00000065785 A030005K14RikA0A1Y7VNY1 122 aa6.78□□□□□ -1.32
Trim50-201ENSMUST00000065785 Mp68P56379 58 aa6.72□□□□□ -1.33
Trim50-201ENSMUST00000065785 Prm2P07978 107 aa6.67□□□□□ -1.34
Trim50-201ENSMUST00000065785 Krtap19-2Q925I0 141 aa6.66□□□□□ -1.34
Trim50-201ENSMUST00000065785 Krtap9-5A2A5X3 358 aa6.63□□□□□ -1.35
Trim50-201ENSMUST00000065785 A030003K21RikA0A1Y7VIM3 128 aa6.6□□□□□ -1.35
Trim50-201ENSMUST00000065785 Gm6217A0A1Y7VJK9 128 aa6.6□□□□□ -1.35
Trim50-201ENSMUST00000065785 Muc5bE9Q5I3 4800 aa6.52□□□□□ -1.37
Trim50-201ENSMUST00000065785 Gm20538F6Z9R1 75 aa6.52□□□□□ -1.37
Trim50-201ENSMUST00000065785 Krtap28-13A0A087WQP5 138 aa6.51□□□□□ -1.37
Trim50-201ENSMUST00000065785 Gm11562A0PK51 136 aa6.5□□□□□ -1.37
Trim50-201ENSMUST00000065785 Lce1iQ9D6P5 149 aa6.48□□□□□ -1.37
Trim50-201ENSMUST00000065785 Krtap4-2B1AQ85 167 aa6.48□□□□□ -1.37
Trim50-201ENSMUST00000065785 Krtap8-1O08633 61 aa6.47□□□□□ -1.37
Trim50-201ENSMUST00000065785 Lce1gQ9D195 139 aa6.43□□□□□ -1.38
Trim50-201ENSMUST00000065785 Lce1a2Q9D1K4 149 aa6.41□□□□□ -1.38
Trim50-201ENSMUST00000065785 Gm11555B1AQ89 175 aa6.38□□□□□ -1.39
Trim50-201ENSMUST00000065785 Krtap19-9bQ99NG9 58 aa6.38□□□□□ -1.39
Trim50-201ENSMUST00000065785 Tnp1P10856 55 aa6.36□□□□□ -1.39
Trim50-201ENSMUST00000065785 Gm6358A0A087WPH4 74 aa6.34□□□□□ -1.39
Trim50-201ENSMUST00000065785 Mdn1A2ANY6 5589 aaKnown RBP6.26□□□□□ -1.41
Trim50-201ENSMUST00000065785 Syne2Q6ZWQ0 6874 aaKnown RBP6.23□□□□□ -1.41
Trim50-201ENSMUST00000065785 Krtap4-6Q3V4B7 195 aa6.22□□□□□ -1.41
Trim50-201ENSMUST00000065785 Gm11596B1AQB0 205 aa6.22□□□□□ -1.41
Trim50-201ENSMUST00000065785 Ndufaf8A2AMZ4 74 aa6.18□□□□□ -1.42
Trim50-201ENSMUST00000065785 Mt2P02798 61 aa6.13□□□□□ -1.43
Trim50-201ENSMUST00000065785 Krtap4-1Q3UUY3 169 aa6.11□□□□□ -1.43
Trim50-201ENSMUST00000065785 2310046K23RikA0A0A6YVW6 87 aa6.09□□□□□ -1.44
Trim50-201ENSMUST00000065785 Krtap9-3Q3V2C1 136 aa5.99□□□□□ -1.45
Trim50-201ENSMUST00000065785 Gm11564A2A4L9 201 aa5.96□□□□□ -1.46
Trim50-201ENSMUST00000065785 Gm11563B1AQ90 168 aa5.96□□□□□ -1.46
Trim50-201ENSMUST00000065785 Gm11595B1AQA7 289 aa5.96□□□□□ -1.46
Trim50-201ENSMUST00000065785 Krtap4-8B1AQA8 209 aa5.96□□□□□ -1.46
Trim50-201ENSMUST00000065785 Lce1hQ9D6R3 140 aa5.95□□□□□ -1.46
Trim50-201ENSMUST00000065785 Krtap22-2J3QNX6 67 aa5.8□□□□□ -1.48
Trim50-201ENSMUST00000065785 Krtap4-9B1AQA9 244 aa5.78□□□□□ -1.48
Trim50-201ENSMUST00000065785 Mt4P47945 62 aa5.73□□□□□ -1.49
Trim50-201ENSMUST00000065785 A0A1Y7VJ07 166 aa5.68□□□□□ -1.5
Trim50-201ENSMUST00000065785 Fsip2A2ARZ3 6995 aa5.66□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 12.6 ms