RNA–Protein interactions for RNA: ENSMUST00000056931.13

Ldb1-202, Transcript of LIM domain-binding protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldb1, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-202ENSMUST00000056931 Lce1mQ9CR91 182 aa10.47□□□□□ -0.73
Ldb1-202ENSMUST00000056931 Gm9955Q8CEJ8 102 aa10.45□□□□□ -0.74
Ldb1-202ENSMUST00000056931 Rpl37Q9D823 97 aa10.43□□□□□ -0.74
Ldb1-202ENSMUST00000056931 Romo1P60603 79 aa10.36□□□□□ -0.75
Ldb1-202ENSMUST00000056931 Gm17606F6ZL36 78 aa10.33□□□□□ -0.76
Ldb1-202ENSMUST00000056931 Gm20538F6Z9R1 75 aa10.32□□□□□ -0.76
Ldb1-202ENSMUST00000056931 Gm10382Q3V0T5 144 aa10.31□□□□□ -0.76
Ldb1-202ENSMUST00000056931 Rnase13Q5GAM7 153 aa10.31□□□□□ -0.76
Ldb1-202ENSMUST00000056931 Mp68P56379 58 aa10.28□□□□□ -0.76
Ldb1-202ENSMUST00000056931 2310057N15RikQ9D6T8 200 aa10.17□□□□□ -0.78
Ldb1-202ENSMUST00000056931 CriptO70333 101 aa10.17□□□□□ -0.78
Ldb1-202ENSMUST00000056931 Gm17416Q30KP4 66 aa10.12□□□□□ -0.79
Ldb1-202ENSMUST00000056931 Krtap3-1A2A591 98 aa10.08□□□□□ -0.8
Ldb1-202ENSMUST00000056931 Ush2AQ2QI47 5193 aa10.08□□□□□ -0.8
Ldb1-202ENSMUST00000056931 Gm18596A0A1W2P860 280 aa10.06□□□□□ -0.8
Ldb1-202ENSMUST00000056931 Sec61bQ9CQS8 96 aaKnown RBP10□□□□□ -0.81
Ldb1-202ENSMUST00000056931 Hmcn2A2AJ76 5100 aa9.98□□□□□ -0.81
Ldb1-202ENSMUST00000056931 Ubr4A2AN08 5180 aa9.92□□□□□ -0.82
Ldb1-202ENSMUST00000056931 2210017I01RikA0A0A6YVV1 95 aa9.91□□□□□ -0.82
Ldb1-202ENSMUST00000056931 Crct1Q6PAI5 102 aa9.88□□□□□ -0.83
Ldb1-202ENSMUST00000056931 Gm10318A0A1W2P728 225 aa9.79□□□□□ -0.84
Ldb1-202ENSMUST00000056931 Krtap16-3Q8C1I6 86 aa9.77□□□□□ -0.84
Ldb1-202ENSMUST00000056931 Krtap13-1Q8K198 168 aa9.76□□□□□ -0.85
Ldb1-202ENSMUST00000056931 Gm9789Q8BIG3 52 aa9.73□□□□□ -0.85
Ldb1-202ENSMUST00000056931 Gm21887J3QQ04 176 aa9.72□□□□□ -0.85
Ldb1-202ENSMUST00000056931 Gm19426M0QWC7 77 aa9.71□□□□□ -0.86
Ldb1-202ENSMUST00000056931 B930094E09RikQ8C4T2 136 aa9.71□□□□□ -0.86
Ldb1-202ENSMUST00000056931 ZanO88799 5376 aa9.69□□□□□ -0.86
Ldb1-202ENSMUST00000056931 4932415D10RikA0A1W2P6U8 4986 aa9.69□□□□□ -0.86
Ldb1-202ENSMUST00000056931 Krtap19-1Q925H2 87 aa9.67□□□□□ -0.86
Ldb1-202ENSMUST00000056931 Gm7735D3YX18 52 aa9.67□□□□□ -0.86
Ldb1-202ENSMUST00000056931 Prm1P02319 51 aa9.67□□□□□ -0.86
Ldb1-202ENSMUST00000056931 Krtap19-3Q925H6 87 aa9.65□□□□□ -0.87
Ldb1-202ENSMUST00000056931 BC029722A0A0N4SW31 51 aa9.64□□□□□ -0.87
Ldb1-202ENSMUST00000056931 Krtap1-3A2A588 173 aa9.61□□□□□ -0.87
Ldb1-202ENSMUST00000056931 Fam229aB2KGE5 128 aa9.58□□□□□ -0.88
Ldb1-202ENSMUST00000056931 Krtap1-5A2A590 122 aa9.53□□□□□ -0.88
Ldb1-202ENSMUST00000056931 Gm17402F6Z0L5 76 aa9.52□□□□□ -0.89
Ldb1-202ENSMUST00000056931 Ndufaf8A2AMZ4 74 aa9.48□□□□□ -0.89
Ldb1-202ENSMUST00000056931 Krtap7-1Q9D3I6 87 aa9.46□□□□□ -0.9
Ldb1-202ENSMUST00000056931 Gm19402J3QJV4 266 aa9.42□□□□□ -0.9
Ldb1-202ENSMUST00000056931 LorP18165 486 aa9.4□□□□□ -0.9
Ldb1-202ENSMUST00000056931 Fat4Q2PZL6 4981 aa9.38□□□□□ -0.91
Ldb1-202ENSMUST00000056931 Gm40193A0A1B0GT39 78 aa9.31□□□□□ -0.92
Ldb1-202ENSMUST00000056931 Prm2P07978 107 aa9.3□□□□□ -0.92
Ldb1-202ENSMUST00000056931 Rnf213E9Q555 5152 aaKnown RBP9.29□□□□□ -0.92
Ldb1-202ENSMUST00000056931 Sprr2a3Q4KL71 83 aa9.19□□□□□ -0.94
Ldb1-202ENSMUST00000056931 Sprr2a1Q9CQK8 83 aa9.19□□□□□ -0.94
Ldb1-202ENSMUST00000056931 Krtap1-4Q3V2D6 188 aa9.16□□□□□ -0.94
Ldb1-202ENSMUST00000056931 Spink7Q6IE32 76 aa9.05□□□□□ -0.96
Ldb1-202ENSMUST00000056931 Gm19668J3QMD1 248 aa9.01□□□□□ -0.97
Ldb1-202ENSMUST00000056931 SspoQ8CG65 4998 aa8.91□□□□□ -0.98
Ldb1-202ENSMUST00000056931 Lce1jD3YUU5 139 aa8.91□□□□□ -0.98
Ldb1-202ENSMUST00000056931 Camk2n1Q6QWF9 78 aa8.79□□□□□ -1
Ldb1-202ENSMUST00000056931 Krtap12-1Q9Z287 130 aa8.78□□□□□ -1
Ldb1-202ENSMUST00000056931 Krtap17-1A2A5X6 109 aa8.74□□□□□ -1.01
Ldb1-202ENSMUST00000056931 Gm10061D3Z714 54 aa8.71□□□□□ -1.02
Ldb1-202ENSMUST00000056931 Gm9112A2AI92 75 aa8.68□□□□□ -1.02
Ldb1-202ENSMUST00000056931 Krtap19-9aF8WH65 55 aa8.65□□□□□ -1.03
Ldb1-202ENSMUST00000056931 Krtap19-2Q925I0 141 aa8.59□□□□□ -1.03
Ldb1-202ENSMUST00000056931 Krtap9-5A2A5X3 358 aa8.56□□□□□ -1.04
Ldb1-202ENSMUST00000056931 Tnp1P10856 55 aa8.36□□□□□ -1.07
Ldb1-202ENSMUST00000056931 Gm11569B1AQB1 180 aa8.34□□□□□ -1.07
Ldb1-202ENSMUST00000056931 Lce1iQ9D6P5 149 aa8.34□□□□□ -1.07
Ldb1-202ENSMUST00000056931 Muc5bE9Q5I3 4800 aa8.29□□□□□ -1.08
Ldb1-202ENSMUST00000056931 Lce1a2Q9D1K4 149 aa8.25□□□□□ -1.09
Ldb1-202ENSMUST00000056931 Gm6358A0A087WPH4 74 aa8.13□□□□□ -1.11
Ldb1-202ENSMUST00000056931 Krtap8-1O08633 61 aa8.05□□□□□ -1.12
Ldb1-202ENSMUST00000056931 2310046K23RikA0A0A6YVW6 87 aa7.95□□□□□ -1.14
Ldb1-202ENSMUST00000056931 Mdn1A2ANY6 5589 aaKnown RBP7.94□□□□□ -1.14
Ldb1-202ENSMUST00000056931 Mt2P02798 61 aa7.92□□□□□ -1.14
Ldb1-202ENSMUST00000056931 Krtap19-9bQ99NG9 58 aa7.9□□□□□ -1.15
Ldb1-202ENSMUST00000056931 Krtap4-2B1AQ85 167 aa7.76□□□□□ -1.17
Ldb1-202ENSMUST00000056931 Lce1gQ9D195 139 aa7.72□□□□□ -1.17
Ldb1-202ENSMUST00000056931 Gm11555B1AQ89 175 aa7.69□□□□□ -1.18
Ldb1-202ENSMUST00000056931 Krtap4-6Q3V4B7 195 aa7.66□□□□□ -1.18
Ldb1-202ENSMUST00000056931 Krtap9-3Q3V2C1 136 aa7.59□□□□□ -1.19
Ldb1-202ENSMUST00000056931 Syne2Q6ZWQ0 6874 aaKnown RBP7.59□□□□□ -1.19
Ldb1-202ENSMUST00000056931 Lce1hQ9D6R3 140 aa7.53□□□□□ -1.2
Ldb1-202ENSMUST00000056931 Gm11596B1AQB0 205 aa7.52□□□□□ -1.21
Ldb1-202ENSMUST00000056931 Krtap4-1Q3UUY3 169 aa7.5□□□□□ -1.21
Ldb1-202ENSMUST00000056931 Krtap22-2J3QNX6 67 aa7.46□□□□□ -1.22
Ldb1-202ENSMUST00000056931 A0A1Y7VLE6 161 aa7.4□□□□□ -1.22
Ldb1-202ENSMUST00000056931 Gm11562A0PK51 136 aa7.4□□□□□ -1.23
Ldb1-202ENSMUST00000056931 Gm11564A2A4L9 201 aa7.28□□□□□ -1.24
Ldb1-202ENSMUST00000056931 Gm11563B1AQ90 168 aa7.28□□□□□ -1.24
Ldb1-202ENSMUST00000056931 Gm11595B1AQA7 289 aa7.28□□□□□ -1.24
Ldb1-202ENSMUST00000056931 Krtap4-8B1AQA8 209 aa7.28□□□□□ -1.24
Ldb1-202ENSMUST00000056931 Lce1dQ9D731 133 aa7.16□□□□□ -1.26
Ldb1-202ENSMUST00000056931 Fsip2A2ARZ3 6995 aa7.12□□□□□ -1.27
Ldb1-202ENSMUST00000056931 Krtap4-9B1AQA9 244 aa7.1□□□□□ -1.27
Ldb1-202ENSMUST00000056931 Sprr2gO70558 76 aa7.1□□□□□ -1.27
Ldb1-202ENSMUST00000056931 Mt4P47945 62 aa7.09□□□□□ -1.27
Ldb1-202ENSMUST00000056931 4933428G20RikQ9D3X4 101 aa7.03□□□□□ -1.28
Ldb1-202ENSMUST00000056931 Sprr2dO70555 85 aa6.96□□□□□ -1.3
Ldb1-202ENSMUST00000056931 Gm10272F7CZ33 110 aa6.93□□□□□ -1.3
Ldb1-202ENSMUST00000056931 Gm11938Q9D3H4 131 aa6.93□□□□□ -1.3
Ldb1-202ENSMUST00000056931 Lce1eQ9D139 143 aa6.92□□□□□ -1.3
Ldb1-202ENSMUST00000056931 Gm38119A0A0A6YX29 146 aa6.89□□□□□ -1.31
Ldb1-202ENSMUST00000056931 Lce1bQ9D149 137 aa6.88□□□□□ -1.31
Retrieved 100 of 22,080 RNA–protein pairs in 100.7 ms