RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Krtap1-5A2A590 122 aa6.47□□□□□ -1.37
Ubr3-201ENSMUST00000055758 PrkdcP97313 4128 aa6.46□□□□□ -1.37
Ubr3-201ENSMUST00000055758 Krtap19-9bQ99NG9 58 aa6.42□□□□□ -1.38
Ubr3-201ENSMUST00000055758 Sprr2gO70558 76 aa6.41□□□□□ -1.38
Ubr3-201ENSMUST00000055758 Krtap1-4Q3V2D6 188 aa6.33□□□□□ -1.4
Ubr3-201ENSMUST00000055758 Dnah14A0A140LIJ4 4489 aa6.28□□□□□ -1.4
Ubr3-201ENSMUST00000055758 Dnah10D3YYQ8 4591 aa6.25□□□□□ -1.41
Ubr3-201ENSMUST00000055758 LorP18165 486 aa6.24□□□□□ -1.41
Ubr3-201ENSMUST00000055758 Fras1Q80T14 4010 aa6.21□□□□□ -1.42
Ubr3-201ENSMUST00000055758 Gm10100J3QK64 120 aa6.14□□□□□ -1.43
Ubr3-201ENSMUST00000055758 Lce3cQ91V05 98 aa6.11□□□□□ -1.43
Ubr3-201ENSMUST00000055758 Lce3bQ9CQM7 98 aa6.08□□□□□ -1.44
Ubr3-201ENSMUST00000055758 TnxbO35452 4006 aa6.05□□□□□ -1.44
Ubr3-201ENSMUST00000055758 Gm10142J3KMP7 120 aa5.96□□□□□ -1.45
Ubr3-201ENSMUST00000055758 Lce3eF8VQJ0 98 aa5.95□□□□□ -1.46
Ubr3-201ENSMUST00000055758 Lce3fQ6PAI4 98 aa5.95□□□□□ -1.46
Ubr3-201ENSMUST00000055758 Dnah1E9Q8T7 4250 aa5.92□□□□□ -1.46
Ubr3-201ENSMUST00000055758 Dnah5Q8VHE6 4621 aa5.92□□□□□ -1.46
Ubr3-201ENSMUST00000055758 Dnah2P0C6F1 4456 aa5.92□□□□□ -1.46
Ubr3-201ENSMUST00000055758 Gm10272F7CZ33 110 aa5.91□□□□□ -1.46
Ubr3-201ENSMUST00000055758 Dnah11E9Q7N9 4488 aa5.9□□□□□ -1.46
Ubr3-201ENSMUST00000055758 Vps13dB1ART2 4390 aa5.88□□□□□ -1.47
Ubr3-201ENSMUST00000055758 Pkhd1l1Q80ZA4 4249 aa5.86□□□□□ -1.47
Ubr3-201ENSMUST00000055758 Lce3dE9Q8V1 98 aa5.85□□□□□ -1.47
Ubr3-201ENSMUST00000055758 2310046K23RikA0A0A6YVW6 87 aa5.83□□□□□ -1.48
Ubr3-201ENSMUST00000055758 Lce3aQ497I5 98 aa5.74□□□□□ -1.49
Ubr3-201ENSMUST00000055758 Sprr2iO70560 76 aa5.73□□□□□ -1.49
Ubr3-201ENSMUST00000055758 Dnah17Q69Z23 4481 aa5.73□□□□□ -1.49
Ubr3-201ENSMUST00000055758 Lce1jD3YUU5 139 aa5.71□□□□□ -1.49
Ubr3-201ENSMUST00000055758 Lce1gQ9D195 139 aa5.71□□□□□ -1.49
Ubr3-201ENSMUST00000055758 Lce1iQ9D6P5 149 aa5.71□□□□□ -1.49
Ubr3-201ENSMUST00000055758 Lce1hQ9D6R3 140 aa5.71□□□□□ -1.49
Ubr3-201ENSMUST00000055758 Dync2h1Q45VK7 4306 aa5.69□□□□□ -1.5
Ubr3-201ENSMUST00000055758 ApobE9Q414 4505 aa5.68□□□□□ -1.5
Ubr3-201ENSMUST00000055758 Gm10024A0A0A0MQA4 119 aa5.67□□□□□ -1.5
Ubr3-201ENSMUST00000055758 Krtap9-5A2A5X3 358 aa5.65□□□□□ -1.5
Ubr3-201ENSMUST00000055758 Stard9Q80TF6 4561 aa5.63□□□□□ -1.51
Ubr3-201ENSMUST00000055758 Krtap19-3Q925H6 87 aa5.62□□□□□ -1.51
Ubr3-201ENSMUST00000055758 Sprr2fO70557 76 aa5.62□□□□□ -1.51
Ubr3-201ENSMUST00000055758 Dnah9B1AR51 4484 aa5.6□□□□□ -1.51
Ubr3-201ENSMUST00000055758 Pkd1O08852 4293 aa5.59□□□□□ -1.51
Ubr3-201ENSMUST00000055758 Lce1mQ9CR91 182 aa5.58□□□□□ -1.52
Ubr3-201ENSMUST00000055758 Hectd4E9Q2E4 4418 aa5.56□□□□□ -1.52
Ubr3-201ENSMUST00000055758 PlecQ9QXS1 4691 aaKnown RBP5.54□□□□□ -1.52
Ubr3-201ENSMUST00000055758 Pkhd1E9PZ36 4059 aa5.53□□□□□ -1.52
Ubr3-201ENSMUST00000055758 Krtap16-3Q8C1I6 86 aa5.5□□□□□ -1.53
Ubr3-201ENSMUST00000055758 Mycbp2Q7TPH6 4711 aa5.48□□□□□ -1.53
Ubr3-201ENSMUST00000055758 Gm38119A0A0A6YX29 146 aa5.47□□□□□ -1.53
Ubr3-201ENSMUST00000055758 Lrp1Q91ZX7 4545 aaKnown RBP5.45□□□□□ -1.54
Ubr3-201ENSMUST00000055758 SacsQ9JLC8 4582 aa5.45□□□□□ -1.54
Ubr3-201ENSMUST00000055758 Sprr2eO70556 76 aa5.43□□□□□ -1.54
Ubr3-201ENSMUST00000055758 Fat1A0A1L1SQU7 4645 aa5.4□□□□□ -1.54
Ubr3-201ENSMUST00000055758 Lrp1bQ9JI18 4599 aa5.39□□□□□ -1.55
Ubr3-201ENSMUST00000055758 Mt2P02798 61 aa5.38□□□□□ -1.55
Ubr3-201ENSMUST00000055758 Krtap22-2J3QNX6 67 aa5.37□□□□□ -1.55
Ubr3-201ENSMUST00000055758 Fat3Q8BNA6 4555 aa5.37□□□□□ -1.55
Ubr3-201ENSMUST00000055758 Lce1bQ9D149 137 aa5.31□□□□□ -1.56
Ubr3-201ENSMUST00000055758 Fat2Q5F226 4351 aa5.3□□□□□ -1.56
Ubr3-201ENSMUST00000055758 Krtap31-2Q8CAY5 177 aa5.27□□□□□ -1.57
Ubr3-201ENSMUST00000055758 Lce1eQ9D139 143 aa5.27□□□□□ -1.57
Ubr3-201ENSMUST00000055758 Krtap31-1Q9D644 177 aa5.26□□□□□ -1.57
Ubr3-201ENSMUST00000055758 Krtap19-2Q925I0 141 aa5.24□□□□□ -1.57
Ubr3-201ENSMUST00000055758 Krtap19-1Q925H2 87 aa5.23□□□□□ -1.57
Ubr3-201ENSMUST00000055758 Lce1fB9EJP6 147 aa5.22□□□□□ -1.57
Ubr3-201ENSMUST00000055758 Lce1cQ9D1C5 147 aa5.22□□□□□ -1.57
Ubr3-201ENSMUST00000055758 Lce1lQ9D1G7 135 aa5.22□□□□□ -1.57
Ubr3-201ENSMUST00000055758 Lce1dQ9D731 133 aa5.22□□□□□ -1.57
Ubr3-201ENSMUST00000055758 Dync1h1Q9JHU4 4644 aaKnown RBP5.2□□□□□ -1.58
Ubr3-201ENSMUST00000055758 Krtap9-3Q3V2C1 136 aa5.16□□□□□ -1.58
Ubr3-201ENSMUST00000055758 Dnah8Q91XQ0 4731 aa5.14□□□□□ -1.59
Ubr3-201ENSMUST00000055758 Sprr2dO70555 85 aa5.06□□□□□ -1.6
Ubr3-201ENSMUST00000055758 Krtap19-4Q925H7 84 aa5.02□□□□□ -1.61
Ubr3-201ENSMUST00000055758 Ryr1E9PZQ0 5035 aa4.92□□□□□ -1.62
Ubr3-201ENSMUST00000055758 Krtap1-3A2A588 173 aa4.92□□□□□ -1.62
Ubr3-201ENSMUST00000055758 Prm1P02319 51 aa4.9□□□□□ -1.62
Ubr3-201ENSMUST00000055758 Lrp2A2ARV4 4660 aa4.79□□□□□ -1.64
Ubr3-201ENSMUST00000055758 Sprr2hO70559 108 aa4.76□□□□□ -1.65
Ubr3-201ENSMUST00000055758 Kmt2cQ8BRH4 4903 aa4.76□□□□□ -1.65
Ubr3-201ENSMUST00000055758 Mt4P47945 62 aa4.73□□□□□ -1.65
Ubr3-201ENSMUST00000055758 Gm7735D3YX18 52 aa4.7□□□□□ -1.66
Ubr3-201ENSMUST00000055758 Syne1Q6ZWR6 8799 aa4.68□□□□□ -1.66
Ubr3-201ENSMUST00000055758 Gm11569B1AQB1 180 aa4.68□□□□□ -1.66
Ubr3-201ENSMUST00000055758 Gm10061D3Z714 54 aa4.65□□□□□ -1.67
Ubr3-201ENSMUST00000055758 Gm9789Q8BIG3 52 aa4.61□□□□□ -1.67
Ubr3-201ENSMUST00000055758 Krtap4-16Q91W93 202 aa4.6□□□□□ -1.67
Ubr3-201ENSMUST00000055758 Lce1kJ3QP15 125 aa4.59□□□□□ -1.67
Ubr3-201ENSMUST00000055758 Lce1a2Q9D1K4 149 aa4.56□□□□□ -1.68
Ubr3-201ENSMUST00000055758 Lce1a1Q9CQH5 143 aa4.55□□□□□ -1.68
Ubr3-201ENSMUST00000055758 Dnhd1D3Z2X2 4750 aa4.51□□□□□ -1.69
Ubr3-201ENSMUST00000055758 Gm11938Q9D3H4 131 aa4.49□□□□□ -1.69
Ubr3-201ENSMUST00000055758 Krtap4-6Q3V4B7 195 aa4.49□□□□□ -1.69
Ubr3-201ENSMUST00000055758 Gm11562A0PK51 136 aa4.47□□□□□ -1.69
Ubr3-201ENSMUST00000055758 Sprr2bO70554 98 aa4.45□□□□□ -1.7
Ubr3-201ENSMUST00000055758 Ryr3A2AGL3 4863 aa4.45□□□□□ -1.7
Ubr3-201ENSMUST00000055758 Krtap4-2B1AQ85 167 aa4.38□□□□□ -1.71
Ubr3-201ENSMUST00000055758 Mt3P28184 68 aa4.37□□□□□ -1.71
Ubr3-201ENSMUST00000055758 PcloQ9QYX7 5068 aa4.37□□□□□ -1.71
Ubr3-201ENSMUST00000055758 2300003K06RikA2A4M0 262 aa4.3□□□□□ -1.72
Ubr3-201ENSMUST00000055758 Herc2Q4U2R1 4836 aa4.28□□□□□ -1.72
Ubr3-201ENSMUST00000055758 Krtap4-7Q9D732 168 aa4.25□□□□□ -1.73
Retrieved 100 of 22,080 RNA–protein pairs in 47.8 ms