RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Ryr3A2AGL3 4863 aa4.91□□□□□ -1.62
Ccdc171-201ENSMUST00000053414 Gm19426M0QWC7 77 aa4.87□□□□□ -1.63
Ccdc171-201ENSMUST00000053414 Abca13Q5SSE9 5034 aa4.86□□□□□ -1.63
Ccdc171-201ENSMUST00000053414 BC029722A0A0N4SW31 51 aa4.83□□□□□ -1.64
Ccdc171-201ENSMUST00000053414 Prm2P07978 107 aa4.83□□□□□ -1.64
Ccdc171-201ENSMUST00000053414 Rps29P62274 56 aa4.81□□□□□ -1.64
Ccdc171-201ENSMUST00000053414 Gm40193A0A1B0GT39 78 aa4.77□□□□□ -1.65
Ccdc171-201ENSMUST00000053414 2310057N15RikQ9D6T8 200 aa4.73□□□□□ -1.65
Ccdc171-201ENSMUST00000053414 Tnp1P10856 55 aa4.71□□□□□ -1.66
Ccdc171-201ENSMUST00000053414 Gm5965D3Z724 196 aa4.68□□□□□ -1.66
Ccdc171-201ENSMUST00000053414 Krtap3-1A2A591 98 aa4.67□□□□□ -1.66
Ccdc171-201ENSMUST00000053414 Krtap7-1Q9D3I6 87 aa4.65□□□□□ -1.67
Ccdc171-201ENSMUST00000053414 Gm19668J3QMD1 248 aa4.62□□□□□ -1.67
Ccdc171-201ENSMUST00000053414 Lrp2A2ARV4 4660 aa4.62□□□□□ -1.67
Ccdc171-201ENSMUST00000053414 Ryr2E9Q401 4966 aaKnown RBP4.59□□□□□ -1.68
Ccdc171-201ENSMUST00000053414 Ryr1E9PZQ0 5035 aa4.56□□□□□ -1.68
Ccdc171-201ENSMUST00000053414 Gm9736A0A1W2P7N1 277 aa4.55□□□□□ -1.68
Ccdc171-201ENSMUST00000053414 Gm19402J3QJV4 266 aa4.52□□□□□ -1.69
Ccdc171-201ENSMUST00000053414 4933428G20RikQ9D3X4 101 aa4.51□□□□□ -1.69
Ccdc171-201ENSMUST00000053414 Gm18596A0A1W2P860 280 aa4.49□□□□□ -1.69
Ccdc171-201ENSMUST00000053414 HydinQ80W93 5154 aa4.49□□□□□ -1.69
Ccdc171-201ENSMUST00000053414 Krtap19-5O08632 62 aa4.47□□□□□ -1.69
Ccdc171-201ENSMUST00000053414 B930094E09RikQ8C4T2 136 aa4.42□□□□□ -1.7
Ccdc171-201ENSMUST00000053414 Dnhd1D3Z2X2 4750 aa4.39□□□□□ -1.71
Ccdc171-201ENSMUST00000053414 Gm17416Q30KP4 66 aa4.39□□□□□ -1.71
Ccdc171-201ENSMUST00000053414 Birc6O88738 4882 aa4.38□□□□□ -1.71
Ccdc171-201ENSMUST00000053414 2210017I01RikA0A0A6YVV1 95 aa4.36□□□□□ -1.71
Ccdc171-201ENSMUST00000053414 PcloQ9QYX7 5068 aa4.35□□□□□ -1.71
Ccdc171-201ENSMUST00000053414 Ubr4A2AN08 5180 aa4.31□□□□□ -1.72
Ccdc171-201ENSMUST00000053414 Kiaa1109A2AAE1 5005 aa4.29□□□□□ -1.72
Ccdc171-201ENSMUST00000053414 Krtap13-1Q8K198 168 aa4.28□□□□□ -1.72
Ccdc171-201ENSMUST00000053414 Lce1mQ9CR91 182 aa4.27□□□□□ -1.73
Ccdc171-201ENSMUST00000053414 Sprr2a3Q4KL71 83 aa4.22□□□□□ -1.73
Ccdc171-201ENSMUST00000053414 Sprr2a1Q9CQK8 83 aa4.22□□□□□ -1.73
Ccdc171-201ENSMUST00000053414 Herc2Q4U2R1 4836 aa4.21□□□□□ -1.74
Ccdc171-201ENSMUST00000053414 Krtap1-5A2A590 122 aa4.18□□□□□ -1.74
Ccdc171-201ENSMUST00000053414 Fat4Q2PZL6 4981 aa4.16□□□□□ -1.74
Ccdc171-201ENSMUST00000053414 Crct1Q6PAI5 102 aa4.16□□□□□ -1.74
Ccdc171-201ENSMUST00000053414 Gm17402F6Z0L5 76 aa4.15□□□□□ -1.75
Ccdc171-201ENSMUST00000053414 4932415D10RikA0A1W2P6U8 4986 aa4.12□□□□□ -1.75
Ccdc171-201ENSMUST00000053414 ZanO88799 5376 aa4.12□□□□□ -1.75
Ccdc171-201ENSMUST00000053414 Krtap16-3Q8C1I6 86 aa4.11□□□□□ -1.75
Ccdc171-201ENSMUST00000053414 Prm1P02319 51 aa4.07□□□□□ -1.76
Ccdc171-201ENSMUST00000053414 Gm10318A0A1W2P728 225 aa4.06□□□□□ -1.76
Ccdc171-201ENSMUST00000053414 Hmcn2A2AJ76 5100 aa4.03□□□□□ -1.76
Ccdc171-201ENSMUST00000053414 Herc1E9PZP8 4859 aa4.03□□□□□ -1.76
Ccdc171-201ENSMUST00000053414 Krtap19-1Q925H2 87 aa4□□□□□ -1.77
Ccdc171-201ENSMUST00000053414 LorP18165 486 aa3.97□□□□□ -1.77
Ccdc171-201ENSMUST00000053414 Krtap19-3Q925H6 87 aa3.94□□□□□ -1.78
Ccdc171-201ENSMUST00000053414 Sprr2kO70562 68 aa3.93□□□□□ -1.78
Ccdc171-201ENSMUST00000053414 Lce1jD3YUU5 139 aa3.92□□□□□ -1.78
Ccdc171-201ENSMUST00000053414 Gm7735D3YX18 52 aa3.92□□□□□ -1.78
Ccdc171-201ENSMUST00000053414 Rnf213E9Q555 5152 aaKnown RBP3.89□□□□□ -1.79
Ccdc171-201ENSMUST00000053414 Krtap1-4Q3V2D6 188 aa3.87□□□□□ -1.79
Ccdc171-201ENSMUST00000053414 Ush2AQ2QI47 5193 aa3.86□□□□□ -1.79
Ccdc171-201ENSMUST00000053414 Krtap17-1A2A5X6 109 aa3.85□□□□□ -1.79
Ccdc171-201ENSMUST00000053414 Krtap9-3Q3V2C1 136 aa3.81□□□□□ -1.8
Ccdc171-201ENSMUST00000053414 Krtap8-1O08633 61 aa3.79□□□□□ -1.8
Ccdc171-201ENSMUST00000053414 Gm9789Q8BIG3 52 aa3.76□□□□□ -1.81
Ccdc171-201ENSMUST00000053414 Sprr2gO70558 76 aa3.76□□□□□ -1.81
Ccdc171-201ENSMUST00000053414 2310046K23RikA0A0A6YVW6 87 aa3.73□□□□□ -1.81
Ccdc171-201ENSMUST00000053414 Lce1dQ9D731 133 aa3.72□□□□□ -1.81
Ccdc171-201ENSMUST00000053414 Lce1hQ9D6R3 140 aa3.72□□□□□ -1.81
Ccdc171-201ENSMUST00000053414 Lce1a2Q9D1K4 149 aa3.69□□□□□ -1.82
Ccdc171-201ENSMUST00000053414 Lce1iQ9D6P5 149 aa3.68□□□□□ -1.82
Ccdc171-201ENSMUST00000053414 Krtap19-9aF8WH65 55 aa3.66□□□□□ -1.82
Ccdc171-201ENSMUST00000053414 SspoQ8CG65 4998 aa3.63□□□□□ -1.83
Ccdc171-201ENSMUST00000053414 Krtap1-3A2A588 173 aa3.63□□□□□ -1.83
Ccdc171-201ENSMUST00000053414 Krtap12-1Q9Z287 130 aa3.61□□□□□ -1.83
Ccdc171-201ENSMUST00000053414 Krtap4-2B1AQ85 167 aa3.59□□□□□ -1.83
Ccdc171-201ENSMUST00000053414 Lce1eQ9D139 143 aa3.58□□□□□ -1.84
Ccdc171-201ENSMUST00000053414 Gm10061D3Z714 54 aa3.52□□□□□ -1.85
Ccdc171-201ENSMUST00000053414 Muc5bE9Q5I3 4800 aa3.52□□□□□ -1.85
Ccdc171-201ENSMUST00000053414 Gm11569B1AQB1 180 aa3.52□□□□□ -1.85
Ccdc171-201ENSMUST00000053414 Gm6358A0A087WPH4 74 aa3.5□□□□□ -1.85
Ccdc171-201ENSMUST00000053414 Krtap9-5A2A5X3 358 aa3.49□□□□□ -1.85
Ccdc171-201ENSMUST00000053414 Lce1gQ9D195 139 aa3.48□□□□□ -1.85
Ccdc171-201ENSMUST00000053414 Krtap19-9bQ99NG9 58 aa3.44□□□□□ -1.86
Ccdc171-201ENSMUST00000053414 Gm11562A0PK51 136 aa3.43□□□□□ -1.86
Ccdc171-201ENSMUST00000053414 Gm11938Q9D3H4 131 aa3.42□□□□□ -1.86
Ccdc171-201ENSMUST00000053414 Krtap19-2Q925I0 141 aa3.4□□□□□ -1.87
Ccdc171-201ENSMUST00000053414 Mdn1A2ANY6 5589 aaKnown RBP3.35□□□□□ -1.87
Ccdc171-201ENSMUST00000053414 Gm38119A0A0A6YX29 146 aa3.34□□□□□ -1.88
Ccdc171-201ENSMUST00000053414 Krtap4-6Q3V4B7 195 aa3.31□□□□□ -1.88
Ccdc171-201ENSMUST00000053414 Lce1cQ9D1C5 147 aa3.3□□□□□ -1.88
Ccdc171-201ENSMUST00000053414 Gm11596B1AQB0 205 aa3.3□□□□□ -1.88
Ccdc171-201ENSMUST00000053414 Sprr2dO70555 85 aa3.29□□□□□ -1.88
Ccdc171-201ENSMUST00000053414 Krtap22-2J3QNX6 67 aa3.28□□□□□ -1.88
Ccdc171-201ENSMUST00000053414 Mt2P02798 61 aa3.25□□□□□ -1.89
Ccdc171-201ENSMUST00000053414 Mt4P47945 62 aa3.22□□□□□ -1.89
Ccdc171-201ENSMUST00000053414 A0A1Y7VLE6 161 aa3.21□□□□□ -1.9
Ccdc171-201ENSMUST00000053414 Lce3bQ9CQM7 98 aa3.21□□□□□ -1.9
Ccdc171-201ENSMUST00000053414 Sprr2iO70560 76 aa3.2□□□□□ -1.9
Ccdc171-201ENSMUST00000053414 Krtap4-1Q3UUY3 169 aa3.2□□□□□ -1.9
Ccdc171-201ENSMUST00000053414 Lce1fB9EJP6 147 aa3.19□□□□□ -1.9
Ccdc171-201ENSMUST00000053414 Lce1a1Q9CQH5 143 aa3.19□□□□□ -1.9
Ccdc171-201ENSMUST00000053414 Lce1lQ9D1G7 135 aa3.19□□□□□ -1.9
Ccdc171-201ENSMUST00000053414 Gm11564A2A4L9 201 aa3.16□□□□□ -1.9
Ccdc171-201ENSMUST00000053414 Gm11563B1AQ90 168 aa3.16□□□□□ -1.9
Ccdc171-201ENSMUST00000053414 Gm11595B1AQA7 289 aa3.16□□□□□ -1.9
Retrieved 100 of 22,080 RNA–protein pairs in 72.7 ms