RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 HydinQ80W93 5154 aa8.29□□□□□ -1.08
Ttc39b-202ENSMUST00000048274 Herc1E9PZP8 4859 aa8.29□□□□□ -1.08
Ttc39b-202ENSMUST00000048274 A0A1Y7VJH8 109 aa8.29□□□□□ -1.08
Ttc39b-202ENSMUST00000048274 Gm10382Q3V0T5 144 aa8.29□□□□□ -1.08
Ttc39b-202ENSMUST00000048274 Gm17416Q30KP4 66 aa8.28□□□□□ -1.08
Ttc39b-202ENSMUST00000048274 Krtap19-5O08632 62 aa8.27□□□□□ -1.09
Ttc39b-202ENSMUST00000048274 Mycbp2Q7TPH6 4711 aa8.23□□□□□ -1.09
Ttc39b-202ENSMUST00000048274 Dnhd1D3Z2X2 4750 aa8.22□□□□□ -1.09
Ttc39b-202ENSMUST00000048274 Krtap3-1A2A591 98 aa8.19□□□□□ -1.1
Ttc39b-202ENSMUST00000048274 Romo1P60603 79 aa8.18□□□□□ -1.1
Ttc39b-202ENSMUST00000048274 Krtap15-1Q9QZU5 150 aa8.15□□□□□ -1.11
Ttc39b-202ENSMUST00000048274 Lrp1Q91ZX7 4545 aaKnown RBP8.14□□□□□ -1.11
Ttc39b-202ENSMUST00000048274 Gm5965D3Z724 196 aa8.12□□□□□ -1.11
Ttc39b-202ENSMUST00000048274 Fat3Q8BNA6 4555 aa8.11□□□□□ -1.11
Ttc39b-202ENSMUST00000048274 Gm9736A0A1W2P7N1 277 aa8.1□□□□□ -1.11
Ttc39b-202ENSMUST00000048274 2210017I01RikA0A0A6YVV1 95 aa8.08□□□□□ -1.12
Ttc39b-202ENSMUST00000048274 A0A1Y7VLE6 161 aa8.07□□□□□ -1.12
Ttc39b-202ENSMUST00000048274 Krtap28-13A0A087WQP5 138 aa8.02□□□□□ -1.13
Ttc39b-202ENSMUST00000048274 Gm19402J3QJV4 266 aa8.01□□□□□ -1.13
Ttc39b-202ENSMUST00000048274 Krtap28-10A0A1Y7VP58 119 aa8.01□□□□□ -1.13
Ttc39b-202ENSMUST00000048274 CriptO70333 101 aa7.99□□□□□ -1.13
Ttc39b-202ENSMUST00000048274 Gm20538F6Z9R1 75 aa7.95□□□□□ -1.14
Ttc39b-202ENSMUST00000048274 Prm1P02319 51 aa7.95□□□□□ -1.14
Ttc39b-202ENSMUST00000048274 Mp68P56379 58 aa7.93□□□□□ -1.14
Ttc39b-202ENSMUST00000048274 Gm7735D3YX18 52 aa7.92□□□□□ -1.14
Ttc39b-202ENSMUST00000048274 A030005K14RikA0A1Y7VNY1 122 aa7.89□□□□□ -1.15
Ttc39b-202ENSMUST00000048274 4932415D10RikA0A1W2P6U8 4986 aa7.89□□□□□ -1.15
Ttc39b-202ENSMUST00000048274 Lrp2A2ARV4 4660 aa7.88□□□□□ -1.15
Ttc39b-202ENSMUST00000048274 Krtap17-1A2A5X6 109 aa7.87□□□□□ -1.15
Ttc39b-202ENSMUST00000048274 B930094E09RikQ8C4T2 136 aa7.87□□□□□ -1.15
Ttc39b-202ENSMUST00000048274 Ush2AQ2QI47 5193 aa7.82□□□□□ -1.16
Ttc39b-202ENSMUST00000048274 Gm17402F6Z0L5 76 aa7.82□□□□□ -1.16
Ttc39b-202ENSMUST00000048274 Gm19426M0QWC7 77 aa7.82□□□□□ -1.16
Ttc39b-202ENSMUST00000048274 Gm21887J3QQ04 176 aa7.8□□□□□ -1.16
Ttc39b-202ENSMUST00000048274 BC029722A0A0N4SW31 51 aa7.79□□□□□ -1.16
Ttc39b-202ENSMUST00000048274 Gm9789Q8BIG3 52 aa7.76□□□□□ -1.17
Ttc39b-202ENSMUST00000048274 Krtap13-1Q8K198 168 aa7.75□□□□□ -1.17
Ttc39b-202ENSMUST00000048274 Ubr4A2AN08 5180 aa7.69□□□□□ -1.18
Ttc39b-202ENSMUST00000048274 Krtap1-5A2A590 122 aa7.66□□□□□ -1.18
Ttc39b-202ENSMUST00000048274 Hmcn2A2AJ76 5100 aa7.65□□□□□ -1.18
Ttc39b-202ENSMUST00000048274 Krtap7-1Q9D3I6 87 aa7.58□□□□□ -1.2
Ttc39b-202ENSMUST00000048274 Sec61bQ9CQS8 96 aaKnown RBP7.57□□□□□ -1.2
Ttc39b-202ENSMUST00000048274 Gm40193A0A1B0GT39 78 aa7.55□□□□□ -1.2
Ttc39b-202ENSMUST00000048274 2310057N15RikQ9D6T8 200 aa7.54□□□□□ -1.2
Ttc39b-202ENSMUST00000048274 Sprr2a3Q4KL71 83 aa7.49□□□□□ -1.21
Ttc39b-202ENSMUST00000048274 Sprr2a1Q9CQK8 83 aa7.49□□□□□ -1.21
Ttc39b-202ENSMUST00000048274 Gm11562A0PK51 136 aa7.38□□□□□ -1.23
Ttc39b-202ENSMUST00000048274 Fam229aB2KGE5 128 aa7.38□□□□□ -1.23
Ttc39b-202ENSMUST00000048274 Ndufaf8A2AMZ4 74 aa7.31□□□□□ -1.24
Ttc39b-202ENSMUST00000048274 Krtap16-3Q8C1I6 86 aa7.29□□□□□ -1.24
Ttc39b-202ENSMUST00000048274 A0A1Y7VJ07 166 aa7.25□□□□□ -1.25
Ttc39b-202ENSMUST00000048274 Krtap19-1Q925H2 87 aa7.22□□□□□ -1.25
Ttc39b-202ENSMUST00000048274 Gm38119A0A0A6YX29 146 aa7.22□□□□□ -1.25
Ttc39b-202ENSMUST00000048274 Spink7Q6IE32 76 aa7.21□□□□□ -1.26
Ttc39b-202ENSMUST00000048274 A030005L19RikA0A1Y7VIU2 113 aa7.2□□□□□ -1.26
Ttc39b-202ENSMUST00000048274 A030014E15RikA0A1Y7VJV2 120 aa7.2□□□□□ -1.26
Ttc39b-202ENSMUST00000048274 Gm7544A0A1Y7VJ58 118 aa7.13□□□□□ -1.27
Ttc39b-202ENSMUST00000048274 Krtap19-3Q925H6 87 aa7.13□□□□□ -1.27
Ttc39b-202ENSMUST00000048274 Gm19668J3QMD1 248 aa7.12□□□□□ -1.27
Ttc39b-202ENSMUST00000048274 ZanO88799 5376 aa7.1□□□□□ -1.27
Ttc39b-202ENSMUST00000048274 Krtap1-4Q3V2D6 188 aa7.1□□□□□ -1.27
Ttc39b-202ENSMUST00000048274 Fat4Q2PZL6 4981 aa7.1□□□□□ -1.27
Ttc39b-202ENSMUST00000048274 Camk2n1Q6QWF9 78 aa7.05□□□□□ -1.28
Ttc39b-202ENSMUST00000048274 Krtap1-3A2A588 173 aa7.03□□□□□ -1.28
Ttc39b-202ENSMUST00000048274 Crct1Q6PAI5 102 aa6.99□□□□□ -1.29
Ttc39b-202ENSMUST00000048274 Gm10318A0A1W2P728 225 aa6.97□□□□□ -1.29
Ttc39b-202ENSMUST00000048274 Prm2P07978 107 aa6.92□□□□□ -1.3
Ttc39b-202ENSMUST00000048274 Lce1a1Q9CQH5 143 aa6.9□□□□□ -1.3
Ttc39b-202ENSMUST00000048274 Lce1gQ9D195 139 aa6.9□□□□□ -1.3
Ttc39b-202ENSMUST00000048274 Gm10061D3Z714 54 aa6.83□□□□□ -1.32
Ttc39b-202ENSMUST00000048274 LorP18165 486 aa6.83□□□□□ -1.32
Ttc39b-202ENSMUST00000048274 Gm11569B1AQB1 180 aa6.81□□□□□ -1.32
Ttc39b-202ENSMUST00000048274 Rnf213E9Q555 5152 aaKnown RBP6.8□□□□□ -1.32
Ttc39b-202ENSMUST00000048274 Tnp1P10856 55 aa6.76□□□□□ -1.33
Ttc39b-202ENSMUST00000048274 Krtap19-9aF8WH65 55 aa6.73□□□□□ -1.33
Ttc39b-202ENSMUST00000048274 Lce1dQ9D731 133 aa6.73□□□□□ -1.33
Ttc39b-202ENSMUST00000048274 Lce1jD3YUU5 139 aa6.71□□□□□ -1.33
Ttc39b-202ENSMUST00000048274 Krtap12-1Q9Z287 130 aa6.71□□□□□ -1.33
Ttc39b-202ENSMUST00000048274 Syne2Q6ZWQ0 6874 aaKnown RBP6.66□□□□□ -1.34
Ttc39b-202ENSMUST00000048274 Gm9112A2AI92 75 aa6.62□□□□□ -1.35
Ttc39b-202ENSMUST00000048274 Krtap8-1O08633 61 aa6.57□□□□□ -1.36
Ttc39b-202ENSMUST00000048274 2310046K23RikA0A0A6YVW6 87 aa6.52□□□□□ -1.37
Ttc39b-202ENSMUST00000048274 Gm11596B1AQB0 205 aa6.5□□□□□ -1.37
Ttc39b-202ENSMUST00000048274 SspoQ8CG65 4998 aa6.48□□□□□ -1.37
Ttc39b-202ENSMUST00000048274 Lce1lQ9D1G7 135 aa6.47□□□□□ -1.37
Ttc39b-202ENSMUST00000048274 Krtap19-9bQ99NG9 58 aa6.43□□□□□ -1.38
Ttc39b-202ENSMUST00000048274 Muc5bE9Q5I3 4800 aa6.37□□□□□ -1.39
Ttc39b-202ENSMUST00000048274 Lce1iQ9D6P5 149 aa6.34□□□□□ -1.4
Ttc39b-202ENSMUST00000048274 Krtap4-6Q3V4B7 195 aa6.32□□□□□ -1.4
Ttc39b-202ENSMUST00000048274 Lce1a2Q9D1K4 149 aa6.29□□□□□ -1.4
Ttc39b-202ENSMUST00000048274 Krtap19-2Q925I0 141 aa6.27□□□□□ -1.41
Ttc39b-202ENSMUST00000048274 Krtap9-5A2A5X3 358 aa6.18□□□□□ -1.42
Ttc39b-202ENSMUST00000048274 Mdn1A2ANY6 5589 aaKnown RBP6.15□□□□□ -1.43
Ttc39b-202ENSMUST00000048274 Krtap9-3Q3V2C1 136 aa6.11□□□□□ -1.43
Ttc39b-202ENSMUST00000048274 Gm11564A2A4L9 201 aa6.09□□□□□ -1.44
Ttc39b-202ENSMUST00000048274 Gm11595B1AQA7 289 aa6.09□□□□□ -1.44
Ttc39b-202ENSMUST00000048274 Krtap4-8B1AQA8 209 aa6.09□□□□□ -1.44
Ttc39b-202ENSMUST00000048274 Lce1hQ9D6R3 140 aa6.09□□□□□ -1.44
Ttc39b-202ENSMUST00000048274 Krtap31-2Q8CAY5 177 aa5.99□□□□□ -1.45
Ttc39b-202ENSMUST00000048274 A030003K21RikA0A1Y7VIM3 128 aa5.88□□□□□ -1.47
Retrieved 100 of 22,080 RNA–protein pairs in 62.2 ms