RNA–Protein interactions for RNA: ENSMUST00000035026.4

Trim42-201, Transcript of Tripartite motif-containing protein 42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim42, Length 2,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42-201ENSMUST00000035026 Spaca4Q80ZQ0 127 aa4.81□□□□□ -1.64
Trim42-201ENSMUST00000035026 B930094E09RikQ8C4T2 136 aa4.78□□□□□ -1.64
Trim42-201ENSMUST00000035026 Rps29P62274 56 aa4.78□□□□□ -1.64
Trim42-201ENSMUST00000035026 Gm4491E0CX42 125 aa4.77□□□□□ -1.65
Trim42-201ENSMUST00000035026 Gm20537G3UYK7 97 aa4.76□□□□□ -1.65
Trim42-201ENSMUST00000035026 A930033H14RikG5E8X6 103 aa4.75□□□□□ -1.65
Trim42-201ENSMUST00000035026 Ush2AQ2QI47 5193 aa4.75□□□□□ -1.65
Trim42-201ENSMUST00000035026 Defb13Q8R2I4 64 aa4.74□□□□□ -1.65
Trim42-201ENSMUST00000035026 Prm1P02319 51 aa4.73□□□□□ -1.65
Trim42-201ENSMUST00000035026 4930507D05RikQ8C9C9 103 aa4.71□□□□□ -1.65
Trim42-201ENSMUST00000035026 Gm7735D3YX18 52 aa4.71□□□□□ -1.66
Trim42-201ENSMUST00000035026 Gm9789Q8BIG3 52 aa4.7□□□□□ -1.66
Trim42-201ENSMUST00000035026 Hmcn2A2AJ76 5100 aa4.7□□□□□ -1.66
Trim42-201ENSMUST00000035026 Gm5767A0A0J9YTU8 78 aa4.66□□□□□ -1.66
Trim42-201ENSMUST00000035026 4932415D10RikA0A1W2P6U8 4986 aa4.64□□□□□ -1.67
Trim42-201ENSMUST00000035026 Cox6b2Q80ZN9 88 aa4.63□□□□□ -1.67
Trim42-201ENSMUST00000035026 Gm10382Q3V0T5 144 aa4.62□□□□□ -1.67
Trim42-201ENSMUST00000035026 Ubr4A2AN08 5180 aa4.61□□□□□ -1.67
Trim42-201ENSMUST00000035026 Fam229aB2KGE5 128 aa4.61□□□□□ -1.67
Trim42-201ENSMUST00000035026 Defb1P56386 69 aa4.56□□□□□ -1.68
Trim42-201ENSMUST00000035026 Gm40193A0A1B0GT39 78 aa4.53□□□□□ -1.68
Trim42-201ENSMUST00000035026 2310079G19RikQ9D6L6 185 aa4.53□□□□□ -1.68
Trim42-201ENSMUST00000035026 Gm10999F6Q4M4 69 aa4.52□□□□□ -1.69
Trim42-201ENSMUST00000035026 Krtap3-2Q9D638 99 aa4.52□□□□□ -1.69
Trim42-201ENSMUST00000035026 Krtap3-3Q9D7P0 99 aa4.52□□□□□ -1.69
Trim42-201ENSMUST00000035026 2210017I01RikA0A0A6YVV1 95 aa4.49□□□□□ -1.69
Trim42-201ENSMUST00000035026 Krtap7-1Q9D3I6 87 aa4.49□□□□□ -1.69
Trim42-201ENSMUST00000035026 Rpl37Q9D823 97 aa4.49□□□□□ -1.69
Trim42-201ENSMUST00000035026 Gm9955Q8CEJ8 102 aa4.47□□□□□ -1.69
Trim42-201ENSMUST00000035026 Krtap1-3A2A588 173 aa4.46□□□□□ -1.7
Trim42-201ENSMUST00000035026 Gm17416Q30KP4 66 aa4.45□□□□□ -1.7
Trim42-201ENSMUST00000035026 ZanO88799 5376 aa4.45□□□□□ -1.7
Trim42-201ENSMUST00000035026 Crct1Q6PAI5 102 aa4.4□□□□□ -1.71
Trim42-201ENSMUST00000035026 Fat4Q2PZL6 4981 aa4.39□□□□□ -1.71
Trim42-201ENSMUST00000035026 Rnf213E9Q555 5152 aaKnown RBP4.37□□□□□ -1.71
Trim42-201ENSMUST00000035026 Krtap16-3Q8C1I6 86 aa4.35□□□□□ -1.71
Trim42-201ENSMUST00000035026 Krtap19-1Q925H2 87 aa4.34□□□□□ -1.71
Trim42-201ENSMUST00000035026 Gm17606F6ZL36 78 aa4.34□□□□□ -1.72
Trim42-201ENSMUST00000035026 Krtap19-3Q925H6 87 aa4.33□□□□□ -1.72
Trim42-201ENSMUST00000035026 Krtap31-1Q9D644 177 aa4.32□□□□□ -1.72
Trim42-201ENSMUST00000035026 LorP18165 486 aa4.31□□□□□ -1.72
Trim42-201ENSMUST00000035026 Gm19668J3QMD1 248 aa4.28□□□□□ -1.72
Trim42-201ENSMUST00000035026 Gm10318A0A1W2P728 225 aa4.26□□□□□ -1.73
Trim42-201ENSMUST00000035026 Gm19402J3QJV4 266 aa4.23□□□□□ -1.73
Trim42-201ENSMUST00000035026 Krtap1-4Q3V2D6 188 aa4.22□□□□□ -1.73
Trim42-201ENSMUST00000035026 Krtap3-1A2A591 98 aa4.19□□□□□ -1.74
Trim42-201ENSMUST00000035026 SspoQ8CG65 4998 aa4.19□□□□□ -1.74
Trim42-201ENSMUST00000035026 Krtap31-2Q8CAY5 177 aa4.17□□□□□ -1.74
Trim42-201ENSMUST00000035026 Krtap13-1Q8K198 168 aa4.17□□□□□ -1.74
Trim42-201ENSMUST00000035026 Gm10061D3Z714 54 aa4.15□□□□□ -1.74
Trim42-201ENSMUST00000035026 Gm19426M0QWC7 77 aa4.14□□□□□ -1.75
Trim42-201ENSMUST00000035026 Krtap1-5A2A590 122 aa4.11□□□□□ -1.75
Trim42-201ENSMUST00000035026 Gm11569B1AQB1 180 aa4.03□□□□□ -1.76
Trim42-201ENSMUST00000035026 BC029722A0A0N4SW31 51 aa3.92□□□□□ -1.78
Trim42-201ENSMUST00000035026 Gm11562A0PK51 136 aa3.92□□□□□ -1.78
Trim42-201ENSMUST00000035026 Lce1jD3YUU5 139 aa3.88□□□□□ -1.79
Trim42-201ENSMUST00000035026 Krtap4-2B1AQ85 167 aa3.88□□□□□ -1.79
Trim42-201ENSMUST00000035026 Krtap19-2Q925I0 141 aa3.87□□□□□ -1.79
Trim42-201ENSMUST00000035026 Muc5bE9Q5I3 4800 aa3.87□□□□□ -1.79
Trim42-201ENSMUST00000035026 Krtap17-1A2A5X6 109 aa3.86□□□□□ -1.79
Trim42-201ENSMUST00000035026 Krtap12-1Q9Z287 130 aa3.86□□□□□ -1.79
Trim42-201ENSMUST00000035026 Krtap9-5A2A5X3 358 aa3.86□□□□□ -1.79
Trim42-201ENSMUST00000035026 Lce1gQ9D195 139 aa3.85□□□□□ -1.79
Trim42-201ENSMUST00000035026 Gm17402F6Z0L5 76 aa3.84□□□□□ -1.79
Trim42-201ENSMUST00000035026 Sprr2a3Q4KL71 83 aa3.83□□□□□ -1.8
Trim42-201ENSMUST00000035026 Sprr2a1Q9CQK8 83 aa3.83□□□□□ -1.8
Trim42-201ENSMUST00000035026 Gm11555B1AQ89 175 aa3.79□□□□□ -1.8
Trim42-201ENSMUST00000035026 Krtap19-9aF8WH65 55 aa3.77□□□□□ -1.81
Trim42-201ENSMUST00000035026 Syne2Q6ZWQ0 6874 aaKnown RBP3.73□□□□□ -1.81
Trim42-201ENSMUST00000035026 Gm11596B1AQB0 205 aa3.71□□□□□ -1.81
Trim42-201ENSMUST00000035026 Gm6358A0A087WPH4 74 aa3.69□□□□□ -1.82
Trim42-201ENSMUST00000035026 Spink7Q6IE32 76 aa3.69□□□□□ -1.82
Trim42-201ENSMUST00000035026 Krtap4-6Q3V4B7 195 aa3.69□□□□□ -1.82
Trim42-201ENSMUST00000035026 Mdn1A2ANY6 5589 aaKnown RBP3.68□□□□□ -1.82
Trim42-201ENSMUST00000035026 Tnp1P10856 55 aa3.66□□□□□ -1.82
Trim42-201ENSMUST00000035026 Lce1iQ9D6P5 149 aa3.65□□□□□ -1.83
Trim42-201ENSMUST00000035026 Krtap4-1Q3UUY3 169 aa3.63□□□□□ -1.83
Trim42-201ENSMUST00000035026 Lce1a2Q9D1K4 149 aa3.59□□□□□ -1.83
Trim42-201ENSMUST00000035026 Gm11564A2A4L9 201 aa3.54□□□□□ -1.84
Trim42-201ENSMUST00000035026 Gm11563B1AQ90 168 aa3.54□□□□□ -1.84
Trim42-201ENSMUST00000035026 Gm11595B1AQA7 289 aa3.54□□□□□ -1.84
Trim42-201ENSMUST00000035026 Krtap4-8B1AQA8 209 aa3.54□□□□□ -1.84
Trim42-201ENSMUST00000035026 Mt2P02798 61 aa3.52□□□□□ -1.85
Trim42-201ENSMUST00000035026 A0A1Y7VJH8 109 aa3.51□□□□□ -1.85
Trim42-201ENSMUST00000035026 2310046K23RikA0A0A6YVW6 87 aa3.46□□□□□ -1.86
Trim42-201ENSMUST00000035026 Krtap4-9B1AQA9 244 aa3.43□□□□□ -1.86
Trim42-201ENSMUST00000035026 Krtap8-1O08633 61 aa3.42□□□□□ -1.86
Trim42-201ENSMUST00000035026 Krtap9-3Q3V2C1 136 aa3.39□□□□□ -1.87
Trim42-201ENSMUST00000035026 Mt4P47945 62 aa3.38□□□□□ -1.87
Trim42-201ENSMUST00000035026 Krtap22-2J3QNX6 67 aa3.34□□□□□ -1.87
Trim42-201ENSMUST00000035026 Krtap28-10A0A1Y7VP58 119 aa3.34□□□□□ -1.88
Trim42-201ENSMUST00000035026 Lce1bQ9D149 137 aa3.32□□□□□ -1.88
Trim42-201ENSMUST00000035026 Fsip2A2ARZ3 6995 aa3.31□□□□□ -1.88
Trim42-201ENSMUST00000035026 Krtap4-13Q9D7P3 165 aa3.31□□□□□ -1.88
Trim42-201ENSMUST00000035026 4933428G20RikQ9D3X4 101 aa3.29□□□□□ -1.88
Trim42-201ENSMUST00000035026 Krtap19-9bQ99NG9 58 aa3.29□□□□□ -1.88
Trim42-201ENSMUST00000035026 Krtap6-3A0A087WQL6 57 aa3.26□□□□□ -1.89
Trim42-201ENSMUST00000035026 A0A1Y7VLE6 161 aa3.22□□□□□ -1.89
Trim42-201ENSMUST00000035026 Gm38119A0A0A6YX29 146 aa3.21□□□□□ -1.89
Trim42-201ENSMUST00000035026 Sprr2iO70560 76 aa3.21□□□□□ -1.9
Retrieved 100 of 22,080 RNA–protein pairs in 58.8 ms